BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0473 (766 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical pr... 31 0.90 Z78014-1|CAB01428.1| 411|Caenorhabditis elegans Hypothetical pr... 30 1.6 AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical... 30 1.6 AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical ... 29 3.6 AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine r... 29 4.8 >U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical protein F36H5.5 protein. Length = 576 Score = 31.1 bits (67), Expect = 0.90 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -1 Query: 424 LSISLNAHSNNLFLTILLAF*Q*RKKQTNNKDLNLFINLW 305 L+I++N N+L L ++ + R KQ KDLNLF+ W Sbjct: 215 LTITVNIPLNDLLLLNCVSL-KIRSKQLTEKDLNLFLKYW 253 >Z78014-1|CAB01428.1| 411|Caenorhabditis elegans Hypothetical protein F42E8.1 protein. Length = 411 Score = 30.3 bits (65), Expect = 1.6 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 297 RECQRFIN-RFKSLLFVCFFRYCQNANNMVRNKLLLCAFNDI 419 R+ +F N ++KS++ V FF +C +A + C+ +DI Sbjct: 3 RKSYQFFNAKYKSIITVAFFSFCGSAKGFENRLINFCSGSDI 44 >AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical protein Y102A5C.36 protein. Length = 213 Score = 30.3 bits (65), Expect = 1.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 292 AHENAKDL*IDLSLYCLFVF----FVIVKMLIIWLETNCYCARLMILTTLFLYTQPNLNI 459 AH + L + L C FVF F+I+ L+ + C A +I FLY PN + Sbjct: 4 AHLIPRALLLGLKNLCFFVFPFVSFIILMFLVFFTGKKCLSAFKLIYFYNFLYFSPNC-V 62 Query: 460 RTFF 471 T F Sbjct: 63 ETIF 66 >AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical protein Y75B7AL.2 protein. Length = 357 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 386 SNHIISILTITKKTNKQ*RLKSIYKSLAFS 297 S+ I+ LT+TKKTN RL++++K+ FS Sbjct: 167 SSRILERLTVTKKTN---RLQTVFKATIFS 193 >AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine receptor, class bc (class b-like) protein 57 protein. Length = 280 Score = 28.7 bits (61), Expect = 4.8 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 202 LCPSNIKMSVNNFSDQHQIFVSFFLNIFFYAHENAKDL*IDLSLYCLFVFF 354 L IK ++ F ++F +FF IF++ H N + + L LFVFF Sbjct: 89 LVMGTIKTTIVFFITIDRVF-AFFSPIFYHKHRNKISMYLVLFFISLFVFF 138 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,816,583 Number of Sequences: 27780 Number of extensions: 356789 Number of successful extensions: 867 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 867 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1830096852 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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