Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0473
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z78014-1|CAB01428.1|  411|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical...    30   1.6  
AC024869-1|AAK68604.2|  357|Caenorhabditis elegans Hypothetical ...    29   3.6  
AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine r...    29   4.8  

>U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical
           protein F36H5.5 protein.
          Length = 576

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 424 LSISLNAHSNNLFLTILLAF*Q*RKKQTNNKDLNLFINLW 305
           L+I++N   N+L L   ++  + R KQ   KDLNLF+  W
Sbjct: 215 LTITVNIPLNDLLLLNCVSL-KIRSKQLTEKDLNLFLKYW 253


>Z78014-1|CAB01428.1|  411|Caenorhabditis elegans Hypothetical
           protein F42E8.1 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 297 RECQRFIN-RFKSLLFVCFFRYCQNANNMVRNKLLLCAFNDI 419
           R+  +F N ++KS++ V FF +C +A       +  C+ +DI
Sbjct: 3   RKSYQFFNAKYKSIITVAFFSFCGSAKGFENRLINFCSGSDI 44


>AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical
           protein Y102A5C.36 protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +1

Query: 292 AHENAKDL*IDLSLYCLFVF----FVIVKMLIIWLETNCYCARLMILTTLFLYTQPNLNI 459
           AH   + L + L   C FVF    F+I+  L+ +    C  A  +I    FLY  PN  +
Sbjct: 4   AHLIPRALLLGLKNLCFFVFPFVSFIILMFLVFFTGKKCLSAFKLIYFYNFLYFSPNC-V 62

Query: 460 RTFF 471
            T F
Sbjct: 63  ETIF 66


>AC024869-1|AAK68604.2|  357|Caenorhabditis elegans Hypothetical
           protein Y75B7AL.2 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -3

Query: 386 SNHIISILTITKKTNKQ*RLKSIYKSLAFS 297
           S+ I+  LT+TKKTN   RL++++K+  FS
Sbjct: 167 SSRILERLTVTKKTN---RLQTVFKATIFS 193


>AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 57 protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 202 LCPSNIKMSVNNFSDQHQIFVSFFLNIFFYAHENAKDL*IDLSLYCLFVFF 354
           L    IK ++  F    ++F +FF  IF++ H N   + + L    LFVFF
Sbjct: 89  LVMGTIKTTIVFFITIDRVF-AFFSPIFYHKHRNKISMYLVLFFISLFVFF 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,816,583
Number of Sequences: 27780
Number of extensions: 356789
Number of successful extensions: 867
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)