BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0472 (698 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_1233 + 27224219-27225607 29 3.5 07_03_0876 - 22215688-22215789,22216051-22216206,22217227-222172... 29 4.7 02_01_0241 + 1595188-1595498,1596621-1596654,1596791-1596979,159... 28 8.2 >12_02_1233 + 27224219-27225607 Length = 462 Score = 29.1 bits (62), Expect = 3.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 198 VRRHLPRLSPYHCRCPGEIWKVLVQD 121 V RHLPR S RC + W+V++ D Sbjct: 8 VLRHLPRRSLAASRCVCQSWRVIIDD 33 >07_03_0876 - 22215688-22215789,22216051-22216206,22217227-22217247, 22217311-22217580,22217793-22219178,22220562-22220621 Length = 664 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 184 KMTTNPQ*NHLSAGVSKCQMKLSN 255 + TT PQ H G +CQ+KL N Sbjct: 8 RRTTTPQRTHSQQGSDRCQLKLEN 31 >02_01_0241 + 1595188-1595498,1596621-1596654,1596791-1596979, 1597956-1598045,1598136-1598201,1598680-1598892 Length = 300 Score = 27.9 bits (59), Expect = 8.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 658 LVLYYSIKFKVLLNLVFIYPNYDFGNCFYHYT 563 L+ Y I F VLL+L+ + D G FY+YT Sbjct: 72 LLGYRLISFFVLLSLLIVIVISDGGTIFYYYT 103 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,165,127 Number of Sequences: 37544 Number of extensions: 288662 Number of successful extensions: 514 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 492 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 513 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1792053856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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