BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0470
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 33 0.14
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.25
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 30 1.8
02_05_0464 - 29256887-29257765,29258455-29258538 30 1.8
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 1.8
01_01_0070 - 542603-542686,542803-543441 29 2.4
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 29 3.1
01_05_0552 - 23173106-23173184,23173266-23173411,23173543-231740... 29 3.1
11_03_0010 - 8922361-8922375,8923888-8924610 29 4.1
10_08_0303 - 16638379-16640199 29 4.1
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 4.1
04_04_0462 + 25393733-25394347 29 4.1
01_06_0751 + 31690411-31690443,31692900-31694240 29 4.1
09_01_0013 - 355103-355435 28 5.4
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 28 5.4
06_03_0332 + 19652207-19652995 28 5.4
05_04_0053 + 17520202-17520984 28 5.4
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 28 5.4
02_05_0683 + 30877731-30878243 28 5.4
12_02_0305 - 17235832-17236379,17237345-17237444 28 7.2
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 28 7.2
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 28 7.2
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 7.2
12_01_0035 - 295988-296408,296645-296813,296929-296965,297097-29... 27 9.5
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 27 9.5
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 27 9.5
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 27 9.5
09_04_0539 - 18416184-18416830,18417983-18419057 27 9.5
03_03_0250 - 15845079-15845345,15846303-15846397,15846563-158466... 27 9.5
02_05_0364 + 28304743-28304814,28305021-28305197,28307309-283074... 27 9.5
01_05_0164 + 18827390-18827710 27 9.5
01_03_0224 + 13940419-13941786 27 9.5
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +1
Query: 25 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRP 147
P PA S A + AT SPR A +PPW T PP I P
Sbjct: 91 PMPTPAASSA-LAPATSSPRPASPPTPPWTTAPPPGIAAPP 130
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P++ P SPP T SPP IT P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P + P SPP T SPP IT P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P +AP SPP SPP IT P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P + P SPP SPP+IT P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P + P SPP T PP IT P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 25 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTD 159
P +NP S I + P + P SPP SPP IT P P +
Sbjct: 492 PEINPYPSPPEIVPSP--PEITPYPSPPEIVPSPPEITPYPSPPE 534
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 79 PRLAPARSPPWGTTSPPRITRRPCPTD 159
P + P SPP SPP IT P P +
Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 76 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVAQCT 192
SPR + + +PP SP RI RRP PT LVA V+ T
Sbjct: 302 SPRRSSSPAPP---PSPRRILRRPRPTLELVAGAVSITT 337
>02_05_0464 - 29256887-29257765,29258455-29258538
Length = 320
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -1
Query: 155 VGHGLLVIRGGDVVPQGGLLA---GASRGDHVALPIGA 51
+G G++ I GG V L A A GDH+ALP GA
Sbjct: 220 MGAGMMGIGGGGVAEYHALSALRFAAGLGDHLALPFGA 257
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 1 PGQTRQTLPGLNPARSYAPIGRATWSPRLA---PARSPPWGTTSPPRITRRPC 150
P T + + L P A G W+ +A PA PP +SPP + PC
Sbjct: 170 PSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPC 222
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 19 TLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 153
T P +P P AT +P +APA++PP P P P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTP 87
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 4 GQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRR 144
G R+ L GL A S + +P A ARSP S PR TRR
Sbjct: 6 GGARRALAGLRSASSSRAFSQP--APAAAAARSPELAAFSLPRSTRR 50
>01_05_0552 -
23173106-23173184,23173266-23173411,23173543-23174022,
23174106-23174161,23175538-23175637,23175708-23175765,
23176163-23176278,23176915-23176974,23177297-23177383,
23178250-23178341,23178409-23178587,23178946-23179087,
23179655-23179706,23180241-23180473,23180569-23180745,
23180882-23181044,23181242-23181392,23181493-23181574,
23182193-23182332,23182499-23183013
Length = 1035
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 167 LHERSHNVRDTVLDGPCGISSLEDWCRNHDSPYVVFSMRVMTRIGAKVLDI 319
+HE +R + C + WCR+H+S V MR + +G++ DI
Sbjct: 186 IHEEVSKLRGRQQNNACHYLCKKRWCRHHNS--VAEFMRNNSELGSEACDI 234
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 104 GLLAG--ASRGDHVALPIGAY-ERAGFNPGNVC 15
G AG A D A IGAY AG+NPG +C
Sbjct: 61 GAAAGMAADAADSAAANIGAYIPEAGYNPGKLC 93
>10_08_0303 - 16638379-16640199
Length = 606
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 280 ASHD*NWSEGSRYSTSRRAVCSLSSRSRIRWHS--GLALRPSEHRRTPQAG*QRDSK 444
+SH + G+ Y++SRR C+ R++ R ++ + + S+ R P QR K
Sbjct: 531 SSHGLQRASGTTYNSSRRKQCARKERAKERLYATPAMGMMVSKSRDEPPPAAQRQQK 587
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 28 GLNPARSYAPIGRATWSPRLAPARSPPWG 114
G++P+R A +P LAPA +P WG
Sbjct: 163 GVSPSRVAVTAAAAEPTPALAPAPAPEWG 191
>04_04_0462 + 25393733-25394347
Length = 204
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 116 VPQGGLLAGASRGDHVALPIGAYERAGFNPGNVCRVC 6
VP GG G G H + +Y A G+V RVC
Sbjct: 96 VPPGGKAGGVCLGGHSVAAVVSYGGAFLGEGSVGRVC 132
>01_06_0751 + 31690411-31690443,31692900-31694240
Length = 457
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 359 VGSGGTPGWPCDPQNIVVLHKPANN 433
+ S G PGWP Q + H P N+
Sbjct: 326 ISSAGVPGWPDHSQRMQAWHAPENS 350
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 40 ARSYAPIGRATWSPRLAPARSPPW 111
AR A GR W PR P R P W
Sbjct: 28 ARGGAAGGRRAWRPRWRPQRRPRW 51
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 35 IPHVHMLRSGERRGPLGSRRPEVRPGELH 121
IPH L + + P+ S++P+VR E+H
Sbjct: 158 IPHSEHLNNDLTQDPVASKKPKVRKKEIH 186
>06_03_0332 + 19652207-19652995
Length = 262
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 52 APIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 153
A I A SP ++P+ + PW R++R P P
Sbjct: 215 AAIDAAARSPAMSPSPTRPWTPERVARVSRSPSP 248
>05_04_0053 + 17520202-17520984
Length = 260
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 484 LAQQTVAAISTAVAYYLVVSRLVEYDDVLRVAGPARS 374
++ T AA++T V+Y +V R+V V V+GP RS
Sbjct: 183 VSPDTAAALATDVSYGVVALRVVVLGRVRFVSGPFRS 219
>04_04_0151 +
23134467-23134627,23134657-23134803,23135413-23135512,
23135554-23135638,23135767-23136419
Length = 381
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +1
Query: 1 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPP------RITRRPCPTDS 162
P T + + G R G PRL+ PP ++SP RI RRP PT
Sbjct: 225 PRSTSELVAGDRVLRRDLVTGGHVHRPRLSRWLRPPRRSSSPVPPLSLRRILRRPRPTPE 284
Query: 163 LVA*EVAQCT 192
LVA V+ T
Sbjct: 285 LVAGAVSVTT 294
>02_05_0683 + 30877731-30878243
Length = 170
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 128 GGDVVPQGGLLAG-ASRGDHVALPIGAYERAGFNPGNVC 15
GG GG A A+RG VA+P+ A A + GN C
Sbjct: 126 GGSGASDGGSTAAMAARGSTVAVPVAAAAVARGSRGNTC 164
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 1 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRIT-RRPCPTDSLVA 171
P R + P ++ + AP+ + P +AP++ P T PP + CP ++++A
Sbjct: 83 PSPRRASPPSVSVEPTPAPVIAPSPPPVVAPSQPPTIAPTQPPTPSGGSQCPRENVIA 140
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 88 APARSPPWGTTSPPRITRRPCPTDS 162
APA +PP +P R+ RRP T S
Sbjct: 13 APAAAPPSAVRTPRRLRRRPLKTAS 37
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = -1
Query: 542 SASHPSRRAITVPDV-ERSTSCPTNCCRHIHCRSLLSRC*PACGVRRCSE-GRRASPECH 369
SA+ P + D + +C T+ H+H SLLS C C E G A +
Sbjct: 321 SAADPMSEDCSAEDTFDAIVTCGTSVLLHMHIYSLLSFCSINTIAAICQEAGMHAVRKNR 380
Query: 368 RIRLREDNEQTARLDVEYLEPSLQF 294
+ L +D E+ R +V+ E F
Sbjct: 381 YVILPKDFEKGYRTNVKKPETDFDF 405
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 497 ERSTSCPTNCCRHIHCRSLLSRC*PACGVR-RCSEGRRASPECHR 366
+R +C + CR C + C C R RC + SP CHR
Sbjct: 417 QRLRNCGRHACRRRCCEGDCAPCPEVCDKRLRCGNHKCLSP-CHR 460
>12_01_0035 -
295988-296408,296645-296813,296929-296965,297097-297173,
297391-297631
Length = 314
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 301 SNSSHDSHRKNHVRRIVISTPIFERGD--PTGPIENGITYIVRP 176
S+SS D H NH R +V+ I+ G GP+ ++ + P
Sbjct: 227 SSSSPDDHTMNHQRPVVLKEMIYNEGSNHQGGPLNLDLSLDICP 270
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 48 ICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMR 176
+C+ R +D + +G+K L ++ D+EKA P MR
Sbjct: 678 LCTSRSNDTENNGSSGKKDDLLLLVTTEDFEKAKIKVRPSAMR 720
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 475 VGQEVLRSTSGTVIARREGWLAEHMLIVGITNPQGKKRYI 594
+G+ V+ S + V +R G E +VG+ P KK+++
Sbjct: 1771 IGKRVVESKTDGVAFKRPGLRKEGSRVVGVPKPGKKKKFM 1810
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 64 RATWSPRLAPARSPPWGTTSPPRITRRPCPTDSLVA 171
R + PR S P SP RI RP PT LVA
Sbjct: 253 RLSRRPRPPRRSSSPVPLPSPHRILHRPRPTSELVA 288
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 5 DRPGRRCPG*IPHVHMLRSGERRGPLGSRRPEVRP 109
DRP R PG H +R+ RG G+R P
Sbjct: 192 DRPRSRAPGAAAHAKGIRTARTRGAHGARAATPTP 226
>03_03_0250 -
15845079-15845345,15846303-15846397,15846563-15846671,
15846981-15847059,15847286-15847355,15847632-15847730,
15847906-15847930
Length = 247
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 331 RAVCSLSSRSRIRWHSGLALRPSEHRRTP 417
RA L ++ W+SG RP H RTP
Sbjct: 139 RATQRLKKIVKVEWNSGTWRRPLPHSRTP 167
>02_05_0364 +
28304743-28304814,28305021-28305197,28307309-28307431,
28307644-28308043,28308129-28308242,28308359-28308454,
28308598-28308791
Length = 391
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 380 PECHRIRLREDNEQTARL 327
P CH++ EDN+QTA L
Sbjct: 47 PNCHKLEEPEDNQQTALL 64
>01_05_0164 + 18827390-18827710
Length = 106
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 64 RATWSPRLAP--ARSPPWGTTSP 126
R TW P LAP +R PP TT P
Sbjct: 46 RTTWRPDLAPTTSRRPPATTTDP 68
>01_03_0224 + 13940419-13941786
Length = 455
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 52 APIGRATWSPRLAPARSPP 108
AP ATWS L ARSPP
Sbjct: 200 APAVHATWSRELLDARSPP 218
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,907,409
Number of Sequences: 37544
Number of extensions: 464035
Number of successful extensions: 1757
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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