Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0470
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 104 5e-23
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 104 5e-23
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 104 5e-23
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 104 5e-23
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 78 6e-15
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 46 3e-05
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 30 1.2
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 2.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 29 3.7
U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 27 8.6
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 104 bits (250), Expect = 5e-23
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM GR
Sbjct: 109 RTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGR 168
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYVIPFSMGPVG PLSKIG+++T
Sbjct: 169 IMYVIPFSMGPVGGPLSKIGIQLT 192
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +2
Query: 254 DSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SGGTPGWPCDPQNIVVL 415
DS YVV SMR+MTR+ V D L ++ FV C+H+VG WPC+P+ +++
Sbjct: 193 DSNYVVLSMRIMTRVNNDVWDALG-NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIA 251
Query: 416 HKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
H+P EI KKCFALR+ S +AKD GW+
Sbjct: 252 HRPPEREIWSFGSGYGGNSLLGKKCFALRIA--SNIAKDEGWM 292
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
IA+ EGW+AEHMLI+G+T P G++ +IAAAFPSACGKTNLA
Sbjct: 285 IAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLA 325
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 104 bits (250), Expect = 5e-23
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM GR
Sbjct: 73 RTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGR 132
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYVIPFSMGPVG PLSKIG+++T
Sbjct: 133 IMYVIPFSMGPVGGPLSKIGIQLT 156
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +2
Query: 254 DSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SGGTPGWPCDPQNIVVL 415
DS YVV SMR+MTR+ V D L ++ FV C+H+VG WPC+P+ +++
Sbjct: 157 DSNYVVLSMRIMTRVNNDVWDALG-NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIA 215
Query: 416 HKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
H+P EI KKCFALR+ S +AKD GW+
Sbjct: 216 HRPPEREIWSFGSGYGGNSLLGKKCFALRIA--SNIAKDEGWM 256
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
IA+ EGW+AEHMLI+G+T P G++ +IAAAFPSACGKTNLA
Sbjct: 249 IAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLA 289
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 104 bits (250), Expect = 5e-23
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM GR
Sbjct: 42 RTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGR 101
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYVIPFSMGPVG PLSKIG+++T
Sbjct: 102 IMYVIPFSMGPVGGPLSKIGIQLT 125
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +2
Query: 254 DSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SGGTPGWPCDPQNIVVL 415
DS YVV SMR+MTR+ V D L ++ FV C+H+VG WPC+P+ +++
Sbjct: 126 DSNYVVLSMRIMTRVNNDVWDALG-NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIA 184
Query: 416 HKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
H+P EI KKCFALR+ S +AKD GW+
Sbjct: 185 HRPPEREIWSFGSGYGGNSLLGKKCFALRIA--SNIAKDEGWM 225
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
IA+ EGW+AEHMLI+G+T P G++ +IAAAFPSACGKTNLA
Sbjct: 218 IAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLA 258
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 104 bits (250), Expect = 5e-23
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V + G + +G++++P D + RFPGCM GR
Sbjct: 109 RTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGR 168
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYVIPFSMGPVG PLSKIG+++T
Sbjct: 169 IMYVIPFSMGPVGGPLSKIGIQLT 192
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +2
Query: 254 DSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SGGTPGWPCDPQNIVVL 415
DS YVV SMR+MTR+ V D L ++ FV C+H+VG WPC+P+ +++
Sbjct: 193 DSNYVVLSMRIMTRVNNDVWDALG-NQDFVRCIHSVGLPRPVKQRVINHWPCNPERVLIA 251
Query: 416 HKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
H+P EI KKCFALR+ S +AKD GW+
Sbjct: 252 HRPPEREIWSFGSGYGGNSLLGKKCFALRIA--SNIAKDEGWM 292
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
IA+ EGW+AEHMLI+G+T P G++ +IAAAFPSACGKTNLA
Sbjct: 285 IAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLA 325
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V G + +G ++S + + RFPGCM GR
Sbjct: 96 RTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCMAGR 155
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYV+P+SMGP+G PLSK G+E+T
Sbjct: 156 PMYVVPYSMGPIGGPLSKNGIELT 179
Score = 77.8 bits (183), Expect = 6e-15
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Frame = +2
Query: 209 GPCGISSLEDWCRNHDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 370
GP G ++ DSPYVV MR MTR+G KVL+ L D FV C+H+VG
Sbjct: 165 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 223
Query: 371 GTPGWPCDPQNIVVLHKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
WPC+P+ +++ H+P EI KKCFALR+ + +D GWL
Sbjct: 224 VINHWPCNPEKVMIAHRPKEREIWSFGSGYGGNSILGKKCFALRIA--CNIGRDEGWL 279
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
I R EGWLAEHMLI+G+TNP+G++++IAAAFPSACGKTNLA
Sbjct: 272 IGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLA 312
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 3 RTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGR 182
RTDP DVARVES+T++ + + D V G + +G ++S + + RFPGCM GR
Sbjct: 96 RTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCMAGR 155
Query: 183 TMYVIPFSMGPVGSPLSKIGVEIT 254
MYV+P+SMGP+G PLSK G+E+T
Sbjct: 156 PMYVVPYSMGPIGGPLSKNGIELT 179
Score = 77.8 bits (183), Expect = 6e-15
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Frame = +2
Query: 209 GPCGISSLEDWCRNHDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 370
GP G ++ DSPYVV MR MTR+G KVL+ L D FV C+H+VG
Sbjct: 165 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 223
Query: 371 GTPGWPCDPQNIVVLHKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
WPC+P+ +++ H+P EI KKCFALR+ + +D GWL
Sbjct: 224 VINHWPCNPEKVMIAHRPKEREIWSFGSGYGGNSILGKKCFALRIA--CNIGRDEGWL 279
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
I R EGWLAEHMLI+G+TNP+G++++IAAAFPSACGKTNLA
Sbjct: 272 IGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLA 312
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 77.8 bits (183), Expect = 6e-15
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Frame = +2
Query: 209 GPCGISSLEDWCRNHDSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG------SG 370
GP G ++ DSPYVV MR MTR+G KVL+ L D FV C+H+VG
Sbjct: 55 GPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEAL-GDNDFVRCIHSVGLPRPVKQK 113
Query: 371 GTPGWPCDPQNIVVLHKPANNEIVXXXXXXXXXXXXXKKCFALRLGQ*SPVAKD-GWL 541
WPC+P+ +++ H+P EI KKCFALR+ + +D GWL
Sbjct: 114 VINHWPCNPEKVMIAHRPKEREIWSFGSGYGGNSILGKKCFALRIA--CNIGRDEGWL 169
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLA 636
I R EGWLAEHMLI+G+TNP+G++++IAAAFPSACGKTNLA
Sbjct: 162 IGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLA 202
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 93 GQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEIT 254
G + +G ++S + + RFPGCM GR MYV+P+SMGP+G PLSK G+E+T
Sbjct: 16 GVRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELT 69
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 52.0 bits (119), Expect = 3e-07
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = +1
Query: 556 VGITNPQGKKRYIAAAFPSACGKTNLA 636
+G+TNP+G++++IAAAFPSACGKTNLA
Sbjct: 1 MGVTNPEGEEKFIAAAFPSACGKTNLA 27
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 114 NYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEIT 254
+Y+S ++ + F M GRTMYV+PFSMG +GS + +GV+IT
Sbjct: 158 HYMSQKMFDFNKTKLFDCSMSGRTMYVVPFSMGTIGSRRAVVGVQIT 204
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 254 DSPYVVFSMRVMTRIGAKVLDILRQDEQFVHCLHAVG 364
D P +V ++R R+ + + D + F+ C+H +G
Sbjct: 205 DDPVLVLNLRTTFRVLSNIWDHIAATTNFLRCVHTIG 241
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 514 IARREGWLAEHMLIVGITNPQ 576
+ ++GWLAE I+ ITNP+
Sbjct: 298 LGAKQGWLAESAAILAITNPK 318
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 560 PTISIC--SASHPSRRAITVPDVERSTSCPTNCCRHIHCRSLLSR 432
PT SIC SA + +PD E ST C N C + LLSR
Sbjct: 2173 PTYSICYCSADQTNVEVSKIPDEESSTPCQVNQC--LETIGLLSR 2215
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 437 SRC*PACGVRRCSEGRRA-SPECHRIRLREDNEQTARLDVEYLEPSLQ 297
SR PACG+R RRA SP +R+ L +E++ + ++L ++Q
Sbjct: 499 SRDLPACGIRASKYRRRALSPFDNRVNLEIQDEKSYEIREQWLIEAIQ 546
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 147 VSDRFPGCMR-----GRTMYVIPFSMGPVGSPLSKIGVEITIRLTWFFLCES*LE 296
+ FPGC GR MY++ F L GVE ++LT +CE L+
Sbjct: 323 IKQYFPGCWHNSDKAGRPMYILRFGQLDTKGMLRSCGVENLVKLT-LSICEDGLQ 376
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = +1
Query: 1 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDS 162
P T PG P ++ P +T P PW T+PP T R P S
Sbjct: 140 PSVTPGGRPGSTPPATFPPGSISTVRYTPGPTPPGPWTYTAPPYYTYRTVPPAS 193
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 488 TSCPTNCCRHIHCRSLLSRC*PACGVRRCSEGRRASPECHRIRLREDN 345
T C T CC CR C CG C G R +R+ E N
Sbjct: 105 TCCCTRCCTC--CRPCCCGCGCGCGCCGCGGGGRKRRSLQNLRIDEAN 150
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 129 PDYEKAVSDRFPGCMRGRTMYVIPFSMGPVG 221
P EK +S R C R RT +P S+GP G
Sbjct: 94 PPKEK-ISTRLASCRRPRTSSSLPLSLGPSG 123
>U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical
protein F11D5.6 protein.
Length = 111
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 61 GRATWSPRLAPARSPPWGTTSPPRITRRPCPTDSL 165
GR + +P PA PP S P +R C D+L
Sbjct: 73 GRLSKTPSSTPAPPPPQPVVSTPAKAKRQCKFDNL 107
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = -1
Query: 488 TSCPTNCCRHIHCRSLLSRC*PACGVRRCSEGRRASPECHRIRLREDN 345
T C T CC CR C CG C G R +R+ + N
Sbjct: 104 TCCCTRCCTC--CRPCCCGCGCGCGCCGCGGGGRKRRSLQNLRIDDAN 149
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 171 MRGRTMYVIPFSMGPVGSPLSKIGVEITIRLTWFF 275
MRG T YV S P S ++ G + T+R+ W F
Sbjct: 293 MRGHTNYVFCCSFNPQSSLIASAGFDETVRV-WDF 326
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 1 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTS 123
P R TLP + + +P SP +P SPP T S
Sbjct: 191 PPPNRSTLPSVETSSGNSPQTPYPGSPEASPQPSPPKNTAS 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,653,143
Number of Sequences: 27780
Number of extensions: 350319
Number of successful extensions: 1216
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -