Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0468
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.12 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.87 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.1  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 321 ESQSNGVDNSNGTQKSQLVFHCQQAH 398
           +S S+ VDNSN ++K   + H   AH
Sbjct: 249 KSPSHSVDNSNSSEKKSSIQHGDDAH 274


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 625 SIFCFNYFYFLWSTFSMR 572
           S++CFNY+  + +TF  R
Sbjct: 74  SLYCFNYYVIVVTTFYKR 91


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 443 FFDVRETRDEAQWTS 399
           F++ +  R EAQWTS
Sbjct: 674 FYENKFYRQEAQWTS 688


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 CSYTMSYLKRKRLNTRRHRYHPH 306
           CSY   Y    +++ RR+ + P+
Sbjct: 292 CSYATKYCHSLKIHLRRYGHTPN 314


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 334 MESIIATVRRSHNWSSTVSKLTEV 405
           + +I+ TVR+   W+  +  L  V
Sbjct: 79  ISTILTTVRKQQQWAQLIQNLKVV 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,668
Number of Sequences: 336
Number of extensions: 3681
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)