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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0468
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical pr...    81   1e-15
U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical p...    75   6e-14
Z50873-2|CAA90759.2|  620|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical pr...    40   0.003
X92565-1|CAA63315.1|  620|Caenorhabditis elegans LIN-2B protein.       40   0.003
X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.       40   0.003
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    37   0.014
U53147-4|AAA96115.1|  668|Caenorhabditis elegans Temporarily ass...    36   0.041
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p...    33   0.17 
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p...    33   0.17 
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact...    33   0.17 
Z36282-4|CAI06055.2|  801|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z31590-10|CAA83466.3|  801|Caenorhabditis elegans Hypothetical p...    32   0.39 
DQ104391-1|AAZ08414.1|  801|Caenorhabditis elegans CNK-1 protein.      32   0.39 
AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical...    32   0.51 
U78092-1|AAB36684.1|  297|Caenorhabditis elegans LIN-7 protein.        30   2.1  
AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical...    30   2.1  
AC024824-6|AAK85504.2|  567|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z82279-2|CAB05260.2|  256|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z66511-1|CAA91314.1|  537|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U50309-5|AAG24135.1|  339|Caenorhabditis elegans Seven tm recept...    28   8.3  
AY151209-1|AAN72826.1|  256|Caenorhabditis elegans COG-1A protein.     28   8.3  

>Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical
           protein F44D12.4 protein.
          Length = 357

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +2

Query: 494 FLYFKTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIK 673
           FL     K DMK +  G +  +D +FAH +G+  E+ +VK  +  G+T+TDNG G AFIK
Sbjct: 104 FLTVNDFKPDMKNMFSGTLNFKDMLFAHVRGQATELRMVKDANVFGVTVTDNGLGNAFIK 163

Query: 674 RIKEGSIVSRI-PHIEVGDHIEKLNGENMV 760
            I  GS+  R+ P  +VG  IE +NGE+++
Sbjct: 164 VISPGSVFDRMRPATQVGQLIEAINGESVL 193



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +3

Query: 312 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 491
           E+  S    V N       +L F CQ AHGSP+ +I  +++++ELY+ IA+ +  S +DI
Sbjct: 43  EEPSSSIMPVVNPLMVAAKELKFPCQLAHGSPVAIIDKWNDMEELYQSIADFFAISKDDI 102

Query: 492 LFCTLKLTKWI*KNFSEG 545
           +F T+   K   KN   G
Sbjct: 103 IFLTVNDFKPDMKNMFSG 120


>U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical
           protein C35D10.2 protein.
          Length = 357

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 494 FLYFKTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIK 673
           FL     K DMK +  G +  +D +FAH +G+  E+ +VK     G+TITDNG G AFIK
Sbjct: 104 FLTVNDFKPDMKNMFTGTLNFKDMLFAHIRGQATELRVVKDAKNFGVTITDNGLGNAFIK 163

Query: 674 RIKEGSIVSRI-PHIEVGDHIEKLNGE 751
            I   S+  R+ P  +VG  IE +NGE
Sbjct: 164 VISPDSVFDRMRPATQVGQLIEAVNGE 190



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = +3

Query: 312 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 491
           E++ S    V N       QL F CQ AHGSP+G+I  ++N++ELY+ IA+C+  S +DI
Sbjct: 43  EESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKWNNMEELYQSIADCFTISKDDI 102

Query: 492 LFCTLKLTKWI*KNFSEG 545
           +F T+   K   KN   G
Sbjct: 103 IFLTVNDFKPDMKNMFTG 120


>Z50873-2|CAA90759.2|  620|Caenorhabditis elegans Hypothetical
           protein F17E5.1b protein.
          Length = 620

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748
           T++ +G+T+  N  G  F+ RI  G ++ R   + VGD I ++NG
Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256


>Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical
           protein F17E5.1a protein.
          Length = 961

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748
           T++ +G+T+  N  G  F+ RI  G ++ R   + VGD I ++NG
Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597


>X92565-1|CAA63315.1|  620|Caenorhabditis elegans LIN-2B protein.
          Length = 620

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748
           T++ +G+T+  N  G  F+ RI  G ++ R   + VGD I ++NG
Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256


>X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.
          Length = 961

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748
           T++ +G+T+  N  G  F+ RI  G ++ R   + VGD I ++NG
Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597


>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
           protein K01A6.2 protein.
          Length = 1092

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +2

Query: 566 IFAHRKGRP-KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKL 742
           ++A  K R   EI+I K  +  G TI DN  G    +RIK+    S+ P++  GD I +L
Sbjct: 564 VYAAAKSRDLHEIDIFKGSEGFGFTIADNLNG----QRIKKILFPSQCPNLMEGDTIVEL 619

Query: 743 NGENM 757
           +G N+
Sbjct: 620 DGRNV 624


>U53147-4|AAA96115.1|  668|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 117 protein.
          Length = 668

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 593 KEIEIVKTEDA-LGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757
           K +E+VK ED+ LG T+  N      + R+ +G IV ++   + GD + +LNG ++
Sbjct: 234 KVVEVVKDEDSYLGATVR-NENNKIIVGRVVKGGIVEKMNLFQEGDELLELNGSSL 288


>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
           protein 10, isoform b protein.
          Length = 1371

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757
           TD G   AFI ++K GS+   I  +  GD + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706


>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
           protein 10, isoform a protein.
          Length = 1563

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757
           TD G   AFI ++K GS+   I  +  GD + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706


>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
           molecule UNC-10 protein.
          Length = 1563

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757
           TD G   AFI ++K GS+   I  +  GD + + NG+++
Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706


>Z36282-4|CAI06055.2|  801|Caenorhabditis elegans Hypothetical
           protein R01H10.8 protein.
          Length = 801

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760
           GL I  +  G   I  IKEGS       I+ GD I  +NG  +V
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318


>Z31590-10|CAA83466.3|  801|Caenorhabditis elegans Hypothetical
           protein R01H10.8 protein.
          Length = 801

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760
           GL I  +  G   I  IKEGS       I+ GD I  +NG  +V
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318


>DQ104391-1|AAZ08414.1|  801|Caenorhabditis elegans CNK-1 protein.
          Length = 801

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760
           GL I  +  G   I  IKEGS       I+ GD I  +NG  +V
Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318


>AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10a protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +2

Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736
           F  A     P+ +E+ KT+  LG  +       +  +I RI  G +  R   ++ GD + 
Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248

Query: 737 KLNGENM 757
            +NG N+
Sbjct: 249 AVNGVNV 255


>U78092-1|AAB36684.1|  297|Caenorhabditis elegans LIN-7 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736
           F  A     P+ +E+ KT+  LG  +       +  +I RI  G +  R   ++ GD + 
Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248

Query: 737 KLNG 748
            +NG
Sbjct: 249 AVNG 252


>AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10b protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736
           F  A     P+ +E+ KT+  LG  +       +  +I RI  G +  R   ++ GD + 
Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248

Query: 737 KLNG 748
            +NG
Sbjct: 249 AVNG 252


>AC024824-6|AAK85504.2|  567|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.4 protein.
          Length = 567

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 593 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748
           K + IV+  + LG TI     G  ++ RI    +  R   I+ GD + ++NG
Sbjct: 129 KIVRIVRRGEPLGATIKCE-RGKVYVARIMANGVADRSGCIQEGDRVLEVNG 179


>Z82279-2|CAB05260.2|  256|Caenorhabditis elegans Hypothetical
           protein R03C1.3a protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 478 ENS*HSAIFSYNSLTLEKPEMRPNG 404
           EN  HS+ +S ++L LEK E  P+G
Sbjct: 20  ENRKHSSTYSISNLLLEKKESSPSG 44


>Z66511-1|CAA91314.1|  537|Caenorhabditis elegans Hypothetical
           protein F07A11.1 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 518 VDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDA 625
           ++MKK       LE++IF H   R +++E+   +DA
Sbjct: 257 IEMKKRRPKSPVLENYIFRHESPRSRDVEVRTRKDA 292


>U50309-5|AAG24135.1|  339|Caenorhabditis elegans Seven tm receptor
           protein 90 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 299 WYRWRRVFRRFLFK*DIVYEHFITAVFF 216
           W+ W      FLF  +I +E +ITAV F
Sbjct: 123 WFMWPHAIVWFLFCSEISFEWWITAVLF 150


>AY151209-1|AAN72826.1|  256|Caenorhabditis elegans COG-1A protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 478 ENS*HSAIFSYNSLTLEKPEMRPNG 404
           EN  HS+ +S ++L LEK E  P+G
Sbjct: 20  ENRKHSSTYSISNLLLEKKESSPSG 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,075,948
Number of Sequences: 27780
Number of extensions: 354094
Number of successful extensions: 782
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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