BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0468 (762 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical pr... 81 1e-15 U21324-13|AAA62558.1| 357|Caenorhabditis elegans Hypothetical p... 75 6e-14 Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 40 0.003 Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 40 0.003 X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 40 0.003 X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 40 0.003 Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 37 0.014 U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 36 0.041 U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 33 0.17 U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 33 0.17 AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 33 0.17 Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 32 0.39 Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 32 0.39 DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 32 0.39 AL034488-16|CAN99708.1| 317|Caenorhabditis elegans Hypothetical... 32 0.51 U78092-1|AAB36684.1| 297|Caenorhabditis elegans LIN-7 protein. 30 2.1 AL034488-17|CAA22459.2| 316|Caenorhabditis elegans Hypothetical... 30 2.1 AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 29 3.6 Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.3 Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical pr... 28 8.3 U50309-5|AAG24135.1| 339|Caenorhabditis elegans Seven tm recept... 28 8.3 AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 28 8.3 >Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical protein F44D12.4 protein. Length = 357 Score = 80.6 bits (190), Expect = 1e-15 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%) Frame = +2 Query: 494 FLYFKTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIK 673 FL K DMK + G + +D +FAH +G+ E+ +VK + G+T+TDNG G AFIK Sbjct: 104 FLTVNDFKPDMKNMFSGTLNFKDMLFAHVRGQATELRMVKDANVFGVTVTDNGLGNAFIK 163 Query: 674 RIKEGSIVSRI-PHIEVGDHIEKLNGENMV 760 I GS+ R+ P +VG IE +NGE+++ Sbjct: 164 VISPGSVFDRMRPATQVGQLIEAINGESVL 193 Score = 52.4 bits (120), Expect = 3e-07 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = +3 Query: 312 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 491 E+ S V N +L F CQ AHGSP+ +I +++++ELY+ IA+ + S +DI Sbjct: 43 EEPSSSIMPVVNPLMVAAKELKFPCQLAHGSPVAIIDKWNDMEELYQSIADFFAISKDDI 102 Query: 492 LFCTLKLTKWI*KNFSEG 545 +F T+ K KN G Sbjct: 103 IFLTVNDFKPDMKNMFSG 120 >U21324-13|AAA62558.1| 357|Caenorhabditis elegans Hypothetical protein C35D10.2 protein. Length = 357 Score = 74.9 bits (176), Expect = 6e-14 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Frame = +2 Query: 494 FLYFKTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIK 673 FL K DMK + G + +D +FAH +G+ E+ +VK G+TITDNG G AFIK Sbjct: 104 FLTVNDFKPDMKNMFTGTLNFKDMLFAHIRGQATELRVVKDAKNFGVTITDNGLGNAFIK 163 Query: 674 RIKEGSIVSRI-PHIEVGDHIEKLNGE 751 I S+ R+ P +VG IE +NGE Sbjct: 164 VISPDSVFDRMRPATQVGQLIEAVNGE 190 Score = 62.9 bits (146), Expect = 2e-10 Identities = 32/78 (41%), Positives = 46/78 (58%) Frame = +3 Query: 312 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 491 E++ S V N QL F CQ AHGSP+G+I ++N++ELY+ IA+C+ S +DI Sbjct: 43 EESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKWNNMEELYQSIADCFTISKDDI 102 Query: 492 LFCTLKLTKWI*KNFSEG 545 +F T+ K KN G Sbjct: 103 IFLTVNDFKPDMKNMFTG 120 >Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical protein F17E5.1b protein. Length = 620 Score = 39.5 bits (88), Expect = 0.003 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748 T++ +G+T+ N G F+ RI G ++ R + VGD I ++NG Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256 >Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein F17E5.1a protein. Length = 961 Score = 39.5 bits (88), Expect = 0.003 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748 T++ +G+T+ N G F+ RI G ++ R + VGD I ++NG Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597 >X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. Length = 620 Score = 39.5 bits (88), Expect = 0.003 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748 T++ +G+T+ N G F+ RI G ++ R + VGD I ++NG Sbjct: 212 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 256 >X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. Length = 961 Score = 39.5 bits (88), Expect = 0.003 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 614 TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748 T++ +G+T+ N G F+ RI G ++ R + VGD I ++NG Sbjct: 553 TQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREING 597 >Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein K01A6.2 protein. Length = 1092 Score = 37.1 bits (82), Expect = 0.014 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +2 Query: 566 IFAHRKGRP-KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKL 742 ++A K R EI+I K + G TI DN G +RIK+ S+ P++ GD I +L Sbjct: 564 VYAAAKSRDLHEIDIFKGSEGFGFTIADNLNG----QRIKKILFPSQCPNLMEGDTIVEL 619 Query: 743 NGENM 757 +G N+ Sbjct: 620 DGRNV 624 >U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily assigned gene nameprotein 117 protein. Length = 668 Score = 35.5 bits (78), Expect = 0.041 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +2 Query: 593 KEIEIVKTEDA-LGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757 K +E+VK ED+ LG T+ N + R+ +G IV ++ + GD + +LNG ++ Sbjct: 234 KVVEVVKDEDSYLGATVR-NENNKIIVGRVVKGGIVEKMNLFQEGDELLELNGSSL 288 >U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated protein 10, isoform b protein. Length = 1371 Score = 33.5 bits (73), Expect = 0.17 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757 TD G AFI ++K GS+ I + GD + + NG+++ Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706 >U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated protein 10, isoform a protein. Length = 1563 Score = 33.5 bits (73), Expect = 0.17 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757 TD G AFI ++K GS+ I + GD + + NG+++ Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706 >AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting molecule UNC-10 protein. Length = 1563 Score = 33.5 bits (73), Expect = 0.17 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 641 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM 757 TD G AFI ++K GS+ I + GD + + NG+++ Sbjct: 668 TDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSL 706 >Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical protein R01H10.8 protein. Length = 801 Score = 32.3 bits (70), Expect = 0.39 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +2 Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760 GL I + G I IKEGS I+ GD I +NG +V Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318 >Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical protein R01H10.8 protein. Length = 801 Score = 32.3 bits (70), Expect = 0.39 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +2 Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760 GL I + G I IKEGS I+ GD I +NG +V Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318 >DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. Length = 801 Score = 32.3 bits (70), Expect = 0.39 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +2 Query: 629 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 760 GL I + G I IKEGS I+ GD I +NG +V Sbjct: 275 GLNIQSSYRGVHVISEIKEGSPADACTKIDAGDEILMINGRTVV 318 >AL034488-16|CAN99708.1| 317|Caenorhabditis elegans Hypothetical protein Y54G11A.10a protein. Length = 317 Score = 31.9 bits (69), Expect = 0.51 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +2 Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736 F A P+ +E+ KT+ LG + + +I RI G + R ++ GD + Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248 Query: 737 KLNGENM 757 +NG N+ Sbjct: 249 AVNGVNV 255 >U78092-1|AAB36684.1| 297|Caenorhabditis elegans LIN-7 protein. Length = 297 Score = 29.9 bits (64), Expect = 2.1 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +2 Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736 F A P+ +E+ KT+ LG + + +I RI G + R ++ GD + Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248 Query: 737 KLNG 748 +NG Sbjct: 249 AVNG 252 >AL034488-17|CAA22459.2| 316|Caenorhabditis elegans Hypothetical protein Y54G11A.10b protein. Length = 316 Score = 29.9 bits (64), Expect = 2.1 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +2 Query: 563 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIE 736 F A P+ +E+ KT+ LG + + +I RI G + R ++ GD + Sbjct: 189 FAAAEGHAHPRIVELPKTDQGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLI 248 Query: 737 KLNG 748 +NG Sbjct: 249 AVNG 252 >AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical protein Y55B1BR.4 protein. Length = 567 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +2 Query: 593 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 748 K + IV+ + LG TI G ++ RI + R I+ GD + ++NG Sbjct: 129 KIVRIVRRGEPLGATIKCE-RGKVYVARIMANGVADRSGCIQEGDRVLEVNG 179 >Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical protein R03C1.3a protein. Length = 256 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 478 ENS*HSAIFSYNSLTLEKPEMRPNG 404 EN HS+ +S ++L LEK E P+G Sbjct: 20 ENRKHSSTYSISNLLLEKKESSPSG 44 >Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical protein F07A11.1 protein. Length = 537 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 518 VDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDA 625 ++MKK LE++IF H R +++E+ +DA Sbjct: 257 IEMKKRRPKSPVLENYIFRHESPRSRDVEVRTRKDA 292 >U50309-5|AAG24135.1| 339|Caenorhabditis elegans Seven tm receptor protein 90 protein. Length = 339 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 299 WYRWRRVFRRFLFK*DIVYEHFITAVFF 216 W+ W FLF +I +E +ITAV F Sbjct: 123 WFMWPHAIVWFLFCSEISFEWWITAVLF 150 >AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. Length = 256 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 478 ENS*HSAIFSYNSLTLEKPEMRPNG 404 EN HS+ +S ++L LEK E P+G Sbjct: 20 ENRKHSSTYSISNLLLEKKESSPSG 44 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,075,948 Number of Sequences: 27780 Number of extensions: 354094 Number of successful extensions: 782 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 735 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 781 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1819579054 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -