Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0467
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029492-1|AAH29492.1|  175|Homo sapiens TPRKB protein protein.        58   4e-08
AY157987-1|AAN76357.1|  142|Homo sapiens CGI-121 S1 isoform prot...    58   4e-08
AY157986-1|AAN76356.1|  214|Homo sapiens CGI-121 L1 isoform prot...    58   4e-08
AF151879-1|AAD34116.1|  175|Homo sapiens CGI-121 protein protein.      58   4e-08
AF060921-1|AAG43133.1|  175|Homo sapiens My019 protein protein.        58   5e-08

>BC029492-1|AAH29492.1|  175|Homo sapiens TPRKB protein protein.
          Length = 175

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGIEKSH-DLLVCFLVTNEIDCRPE-ILPEIKGE 428
           M TRT+  EI++NLS   NI+++L KFGI  +   +L+ ++   E     E ++ +++G 
Sbjct: 70  MKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGH 129

Query: 429 QCSITELCNFTNLKDVKSVYKLNN 500
           Q S+  L    N+ +VK +YKL++
Sbjct: 130 QVSLKNLPEIMNITEVKKIYKLSS 153



 Score = 37.1 bits (82), Expect = 0.071
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = +1

Query: 40  MKLEHFTCVLDPETKTTLKIYLYKNVQNIEEIRNHITNGEWNCAIIKPSLILDPFQ 207
           M+L H    L PE + TL   L+K+V+N  ++R     G  + ++I P++I+DPFQ
Sbjct: 1   MQLTH-QLDLFPECRVTL--LLFKDVKNAGDLRRKAMEGTIDGSLINPTVIVDPFQ 53


>AY157987-1|AAN76357.1|  142|Homo sapiens CGI-121 S1 isoform
           protein.
          Length = 142

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGIEKSH-DLLVCFLVTNEIDCRPE-ILPEIKGE 428
           M TRT+  EI++NLS   NI+++L KFGI  +   +L+ ++   E     E ++ +++G 
Sbjct: 37  MKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGH 96

Query: 429 QCSITELCNFTNLKDVKSVYKLNN 500
           Q S+  L    N+ +VK +YKL++
Sbjct: 97  QVSLKNLPEIMNITEVKKIYKLSS 120


>AY157986-1|AAN76356.1|  214|Homo sapiens CGI-121 L1 isoform
           protein.
          Length = 214

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGIEKSH-DLLVCFLVTNEIDCRPE-ILPEIKGE 428
           M TRT+  EI++NLS   NI+++L KFGI  +   +L+ ++   E     E ++ +++G 
Sbjct: 109 MKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGH 168

Query: 429 QCSITELCNFTNLKDVKSVYKLNN 500
           Q S+  L    N+ +VK +YKL++
Sbjct: 169 QVSLKNLPEIMNITEVKKIYKLSS 192


>AF151879-1|AAD34116.1|  175|Homo sapiens CGI-121 protein protein.
          Length = 175

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGIEKSH-DLLVCFLVTNEIDCRPE-ILPEIKGE 428
           M TRT+  EI++NLS   NI+++L KFGI  +   +L+ ++   E     E ++ +++G 
Sbjct: 70  MKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGH 129

Query: 429 QCSITELCNFTNLKDVKSVYKLNN 500
           Q S+  L    N+ +VK +YKL++
Sbjct: 130 QVSLKNLPEIMNITEVKKIYKLSS 153



 Score = 37.1 bits (82), Expect = 0.071
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = +1

Query: 40  MKLEHFTCVLDPETKTTLKIYLYKNVQNIEEIRNHITNGEWNCAIIKPSLILDPFQ 207
           M+L H    L PE + TL   L+K+V+N  ++R     G  + ++I P++I+DPFQ
Sbjct: 1   MQLTH-QLDLFPECRVTL--LLFKDVKNAGDLRRKAMEGTIDGSLINPTVIVDPFQ 53


>AF060921-1|AAG43133.1|  175|Homo sapiens My019 protein protein.
          Length = 175

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGIEKSH-DLLVCFLVTNEIDCRPE-ILPEIKGE 428
           M TRT+  EI++NLS   NI+++L KFGI  +   +L+ ++   E     E ++ +++G 
Sbjct: 70  MKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGH 129

Query: 429 QCSITELCNFTNLKDVKSVYKLNN 500
           Q S+  L    N+ +VK +YKL++
Sbjct: 130 QVSLKNLPEIMNITEVKRIYKLSS 153



 Score = 37.1 bits (82), Expect = 0.071
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = +1

Query: 40  MKLEHFTCVLDPETKTTLKIYLYKNVQNIEEIRNHITNGEWNCAIIKPSLILDPFQ 207
           M+L H    L PE + TL   L+K+V+N  ++R     G  + ++I P++I+DPFQ
Sbjct: 1   MQLTH-QLDLFPECRVTL--LLFKDVKNAGDLRRKAMEGTIDGSLINPTVIVDPFQ 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,752,580
Number of Sequences: 237096
Number of extensions: 1956656
Number of successful extensions: 3425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3425
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)