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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0467
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039041-3|AAB94192.1|  183|Caenorhabditis elegans Hypothetical ...    44   2e-04
AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical ...    30   2.1  
AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical ...    30   2.1  
AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z83230-10|CAL22704.2|  714|Caenorhabditis elegans Hypothetical p...    28   6.5  
AL021481-9|CAA16332.3|  714|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical ...    28   8.6  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     28   8.6  

>AF039041-3|AAB94192.1|  183|Caenorhabditis elegans Hypothetical
           protein W03F8.4 protein.
          Length = 183

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 MVTRTVFGEILYNLSLTKNITQSLSKFGI-EKSHDLLVCFLVTNEIDCRPEILPEIKGEQ 431
           M  R++  E++Y+LS ++NIT SL  FGI E S  ++      +      ++   IKG  
Sbjct: 77  MSCRSLAAELVYSLSPSRNITDSLVTFGIAEHSTAIIAAIFDDDSGKAMKKLAKAIKGTP 136

Query: 432 CSITE-LCNFTNLKDVKSVYKLNN 500
             + E L  F N+  +K VY++ N
Sbjct: 137 VPLMEGLPKFANVNMIKKVYQVGN 160



 Score = 35.9 bits (79), Expect = 0.032
 Identities = 13/41 (31%), Positives = 27/41 (65%)
 Frame = +1

Query: 82  KTTLKIYLYKNVQNIEEIRNHITNGEWNCAIIKPSLILDPF 204
           + T ++ L+K+V+N  E+   +  G+ + A+I+  L+L+PF
Sbjct: 19  RKTCRVCLFKDVKNAAELSQQLKEGKIDAALIRAELVLEPF 59



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 509 DEGLLDIIVSRMTTKNFVS 565
           +EGL D IVSRM +K+FVS
Sbjct: 165 EEGLSDHIVSRMVSKDFVS 183


>AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical
           protein Y113G7B.7 protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 396 RPEILPEIKGEQCSITELCNFTNLKDVKSVYKLNNLKRTK 515
           +P +L EI G +C    L NFTN+ +V ++++L   K+ K
Sbjct: 178 KPRVLEEI-GIRC----LANFTNISEVSNLFELEQWKKAK 212


>AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical
           protein W08E12.7 protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 291 NLSLTKNITQSLSKFGIEKSHDLLVCFLVTNEIDCRPEIL 410
           N ++TKNI ++ ++FG+    ++L   L  NEID   +I+
Sbjct: 174 NTTITKNIDKTAAEFGLTPIENMLSHQLERNEIDGEKKII 213


>AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.5 protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -1

Query: 446 FCNRTLFTFYFGKYFRSAIYFICN*EAYE*IMAFFYS 336
           FC+  L  F+F ++   AI+F C  + +  ++AFF++
Sbjct: 351 FCS-ALLLFFFREHSPMAIFFFCLFQFFHVVIAFFFA 386


>Z83230-10|CAL22704.2|  714|Caenorhabditis elegans Hypothetical
           protein Y43F4B.3 protein.
          Length = 714

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 696 RRVANTDPSKSSASLNLPPDRKP 764
           RR++ TD ++SS ++N+  DRKP
Sbjct: 83  RRISATDATQSSRTMNVIEDRKP 105


>AL021481-9|CAA16332.3|  714|Caenorhabditis elegans Hypothetical
           protein Y43F4B.3 protein.
          Length = 714

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 696 RRVANTDPSKSSASLNLPPDRKP 764
           RR++ TD ++SS ++N+  DRKP
Sbjct: 83  RRISATDATQSSRTMNVIEDRKP 105


>Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 370 KHTSKSWLFSIPNLLKLCVIFLVSDKLYKISP 275
           K +S   L   PN+++LC  F+    +Y+I+P
Sbjct: 97  KESSNLRLMHHPNIIELCECFVYERSIYQITP 128


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
           protein K04B12.1 protein.
          Length = 1764

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 615 KGNWGVGSKNCMT*F**ETKFFVVILLTIISNNPSS 508
           K NW     +C +        F ++LLT ISNNP S
Sbjct: 532 KANWTTTGVSCPSEIFTSPNTFEILLLTSISNNPIS 567


>AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 370 KHTSKSWLFSIPNLLKLCVIFLVSDKLYKISP 275
           K +S   L   PN+++LC  F+    +Y+I+P
Sbjct: 97  KESSNLRLMHHPNIIELCECFVYERSIYQITP 128


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 615 KGNWGVGSKNCMT*F**ETKFFVVILLTIISNNPSS 508
           K NW     +C +        F ++LLT ISNNP S
Sbjct: 534 KANWTTTGVSCPSEIFTSPNTFEILLLTSISNNPIS 569


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,807,616
Number of Sequences: 27780
Number of extensions: 343933
Number of successful extensions: 945
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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