BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0465 (723 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535... 31 0.93 01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688... 30 1.6 01_06_0995 + 33661367-33661380,33661729-33661826,33662059-336622... 29 2.8 >01_06_0994 + 33653055-33653144,33653219-33653310,33653483-33653580, 33653758-33653913,33654009-33654628,33654721-33654794, 33654905-33655156,33655250-33655367,33655468-33655639, 33655729-33656270 Length = 737 Score = 31.1 bits (67), Expect = 0.93 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 627 SPPGVKWLLEP-IDIYN-VNAPHTWRNKF*GGWRIYFLDVYGSYGW 496 SPPGVK ++EP + +++ N HT++ F W++ +GS W Sbjct: 667 SPPGVKMVVEPSVLVFDAANKVHTFKVSFSPLWKLQGDYTFGSLTW 712 >01_06_0996 + 33667663-33667900,33668019-33668091,33668785-33668841, 33668970-33669067,33669482-33669637,33669744-33670366, 33670484-33670560,33671551-33671805,33671950-33672067, 33672174-33672345,33672434-33672975 Length = 802 Score = 30.3 bits (65), Expect = 1.6 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 627 SPPGVKWLLE-PIDIYN-VNAPHTWRNKF*GGWRIYFLDVYGSYGW 496 SPPGVK +E P+ ++N N HT++ K W++ +GS W Sbjct: 732 SPPGVKMDVEPPVLVFNAANKVHTFQVKLSPLWKLQGDYTFGSLTW 777 >01_06_0995 + 33661367-33661380,33661729-33661826,33662059-33662214, 33663307-33663926,33664020-33664090,33664176-33664427, 33664494-33664611,33664715-33664886,33664970-33665511 Length = 680 Score = 29.5 bits (63), Expect = 2.8 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = -1 Query: 624 PPGVKWLLEP-IDIYN-VNAPHTWRNKF*GGWRIYFLDVYGSYGW 496 PPGVK ++EP + +++ N HT++ F W++ +GS W Sbjct: 611 PPGVKMVVEPSVLVFDAANKVHTFKVSFSPLWKLQGDYTFGSLTW 655 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,389,033 Number of Sequences: 37544 Number of extensions: 372873 Number of successful extensions: 603 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 603 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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