Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0465
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.72 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   2.2  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   6.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   8.9  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -1

Query: 444 KKNHSNVIST*QMFTIDFHGERITSCNKN--HISHDYNLRNYLGRLVTPHG 298
           K NH+ +       T   + E I   N +  +++HDYNL N L   +   G
Sbjct: 178 KANHALIFGKLDTKTSGKYKEYIIPANYSGWYLNHDYNLENKLNYFIEDIG 228


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -1

Query: 444 KKNHSNVIST*QMFTIDFHGERITSCNKN--HISHDYNLRNYL 322
           K NH+ +       T   + E I   N +  +++HDYNL N L
Sbjct: 178 KANHALIFGKLDTKTSGKYKEYIIPANYSGWYLNHDYNLENKL 220


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 324 SNYANYNHARYDFYYTMLFF 383
           +NY NYN+  Y+ Y   L++
Sbjct: 328 NNYNNYNNNNYNNYNKKLYY 347


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 324 SNYANYNHARYDFYY 368
           SNY NYN+     YY
Sbjct: 92  SNYNNYNNYNKKLYY 106


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 676 LFCYIFFYCLDVWTS 632
           L C++ F+C+++ TS
Sbjct: 282 LICWVPFFCVNIVTS 296


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 494  NHLTPDRVCARPP 456
            NH  P+R C  PP
Sbjct: 1693 NHCAPNRRCPPPP 1705


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 324 SNYANYNHARYDFYYTMLF 380
           +NY NYN+  Y+ Y  + +
Sbjct: 336 NNYNNYNNNNYNNYKKLYY 354


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 318 ALSNYANYNHARYDFYY 368
           +LSN  NYN+  Y + Y
Sbjct: 317 SLSNNYNYNNNNYKYNY 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,356
Number of Sequences: 438
Number of extensions: 4571
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)