Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0465
         (723 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g34220.1 68415.m04187 hypothetical protein contains Pfam prof...    29   4.1  
At2g25690.1 68415.m03079 senescence-associated protein-related s...    29   4.1  
At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ...    28   5.5  

>At2g34220.1 68415.m04187 hypothetical protein contains Pfam
           profiles PF04780: Protein of unknown function (DUF629),
           PF04781: Protein of unknown function (DUF627)
          Length = 718

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 650 PRCVDELTAHLVLSGYWNP 594
           P+CVDE+ A ++  G W P
Sbjct: 283 PKCVDEILADMICCGDWKP 301


>At2g25690.1 68415.m03079 senescence-associated protein-related
           similar to senescence-associated protein SAG102
           (GI:22331931) [Arabidopsis thaliana]
          Length = 324

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 402 TIDFHGERITSCNKNHISHDYNLRNYLGRLVTPHG--QVQNFCKKK 271
           T   +G+R+  C+KN +  D + +   G +        + NFC KK
Sbjct: 232 TTHIYGDRVLECHKNELKGDEDNKEKFGSVFPSDNFLGICNFCNKK 277


>At2g18700.1 68415.m02178 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein similar to
           trehalose-6-phosphate synthase SL-TPS/P [Selaginella
           lepidophylla] GI:4100325; contains Pfam profiles
           PF00982: Glycosyltransferase family 20, PF02358:
           Trehalose-phosphatase
          Length = 862

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 52  IGTFWPSTKLSCYFLNFINTFFYPVFVYLV 141
           + TF PS  L+ Y+  F   + +P+F YL+
Sbjct: 124 VPTFLPSDLLNKYYHGFCKHYLWPIFHYLL 153


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,013,734
Number of Sequences: 28952
Number of extensions: 306279
Number of successful extensions: 572
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)