Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0464
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep: Trans...   127   2e-28
UniRef50_Q7QKM5 Cluster: ENSANGP00000017183; n=6; Anopheles gamb...    55   2e-06

>UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep:
           Transposase - Bombyx mori (Silk moth)
          Length = 346

 Score =  127 bits (306), Expect = 2e-28
 Identities = 67/84 (79%), Positives = 67/84 (79%)
 Frame = -2

Query: 254 APIQIFNILTNLNITKRFVYRTIKRYNEXXXXXXXXXXXXXXXXRTPAVIKAVKARIQRN 75
           APIQIFNIL NLNITKRFVYRTIKRYNE                RTPAVIKAVKARIQRN
Sbjct: 21  APIQIFNILKNLNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRN 80

Query: 74  PKRKQKLLALQMGLSRTTVKRVLN 3
           PKRKQKLLALQMGLSRTTVKRVLN
Sbjct: 81  PKRKQKLLALQMGLSRTTVKRVLN 104



 Score = 39.5 bits (88), Expect = 0.064
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -3

Query: 313 ME*TLKEDRVAVIALHRCG 257
           ME TLKEDRVAVIALHRCG
Sbjct: 1   MEWTLKEDRVAVIALHRCG 19


>UniRef50_Q7QKM5 Cluster: ENSANGP00000017183; n=6; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000017183 - Anopheles gambiae
           str. PEST
          Length = 280

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = -2

Query: 257 LAPIQIFNILTNLNITKRFVYRTIKRYNEXXXXXXXXXXXXXXXXRTPAVIKAVKARIQR 78
           L  IQ    L++LN+++ FVYRTIKRY E                RTPAVIKAVK R+ +
Sbjct: 18  LTNIQSKQKLSHLNLSQLFVYRTIKRYKETGTVVPNKKLGKKLSVRTPAVIKAVKERVGQ 77

Query: 77  NPKRK-QKLLALQMGLSRTTVKRV 9
           NP R  +K+  +Q  L +    RV
Sbjct: 78  NPARAGRKMAPMQSILKKDLGYRV 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,358,634
Number of Sequences: 1657284
Number of extensions: 9058964
Number of successful extensions: 17233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17231
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)