BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0463 (708 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7LBR1 Cluster: Charged multivesicular body protein 1b;... 65 1e-09 UniRef50_Q7ZVB1 Cluster: Charged multivesicular body protein 1b;... 62 1e-08 UniRef50_Q15EU1 Cluster: Vacuolar assembly/sorting protein D1D2-... 61 2e-08 UniRef50_Q9TXI3 Cluster: Putative uncharacterized protein F23C8.... 54 5e-06 UniRef50_Q9FZ60 Cluster: F11A6.7 protein; n=11; Viridiplantae|Re... 44 0.003 UniRef50_O60074 Cluster: Vacuolar sorting protein Did2; n=1; Sch... 42 0.015 UniRef50_P69771 Cluster: Vacuolar protein-sorting-associated pro... 37 0.42 UniRef50_A2Q7C4 Cluster: Remark: RAD52 Inhibitor; n=9; Eurotiomy... 35 2.3 >UniRef50_Q7LBR1 Cluster: Charged multivesicular body protein 1b; n=55; Fungi/Metazoa group|Rep: Charged multivesicular body protein 1b - Homo sapiens (Human) Length = 199 Score = 65.3 bits (152), Expect = 1e-09 Identities = 35/50 (70%), Positives = 42/50 (84%) Frame = +3 Query: 6 VDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 155 VD LLQ++ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLARLR Sbjct: 149 VDMLLQEMADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLARLR 196 >UniRef50_Q7ZVB1 Cluster: Charged multivesicular body protein 1b; n=13; Coelomata|Rep: Charged multivesicular body protein 1b - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 199 Score = 62.1 bits (144), Expect = 1e-08 Identities = 32/50 (64%), Positives = 41/50 (82%) Frame = +3 Query: 6 VDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 155 VD L+ ++ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLA+LR Sbjct: 149 VDTLMMEMADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLAKLR 196 >UniRef50_Q15EU1 Cluster: Vacuolar assembly/sorting protein D1D2-like protein; n=4; Schistosoma|Rep: Vacuolar assembly/sorting protein D1D2-like protein - Schistosoma mansoni (Blood fluke) Length = 196 Score = 61.3 bits (142), Expect = 2e-08 Identities = 30/53 (56%), Positives = 39/53 (73%) Frame = +3 Query: 3 DVDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLRQA 161 +V L+ QVADE G+ELN ELP G TS+ A + ++E+D LTQRLARLRQ+ Sbjct: 145 EVQGLINQVADETGIELNYELP-GSTHTSVSVAPISAEEEDGLTQRLARLRQS 196 >UniRef50_Q9TXI3 Cluster: Putative uncharacterized protein F23C8.6; n=2; Caenorhabditis|Rep: Putative uncharacterized protein F23C8.6 - Caenorhabditis elegans Length = 205 Score = 53.6 bits (123), Expect = 5e-06 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +3 Query: 6 VDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 155 VD L+ + AD+AG+ELN ELPS VP T++ T T E +LT+RLA LR Sbjct: 155 VDALIAEAADKAGIELNQELPSNVP-TALPTGTQAVSEDKDLTERLAALR 203 >UniRef50_Q9FZ60 Cluster: F11A6.7 protein; n=11; Viridiplantae|Rep: F11A6.7 protein - Arabidopsis thaliana (Mouse-ear cress) Length = 222 Score = 44.4 bits (100), Expect = 0.003 Identities = 23/51 (45%), Positives = 36/51 (70%) Frame = +3 Query: 3 DVDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 155 +V++L+QQVAD+ GLE+++ LP +I T T E+D+LT+RLA L+ Sbjct: 151 EVNSLMQQVADDYGLEVSVGLPQPA-GHAIPTKTEEKVEEDDLTRRLAELK 200 >UniRef50_O60074 Cluster: Vacuolar sorting protein Did2; n=1; Schizosaccharomyces pombe|Rep: Vacuolar sorting protein Did2 - Schizosaccharomyces pombe (Fission yeast) Length = 178 Score = 41.9 bits (94), Expect = 0.015 Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = +3 Query: 3 DVDNLLQQVADEAGLELNMELPS--GVPSTSIGTATVVSQEQDELTQRLARLR 155 DVD L+Q VADEAGLE N + + VP+ S+ T E D L +RL LR Sbjct: 126 DVDLLMQTVADEAGLEFNQNMNNNLSVPAASVPT-PAAPVEDDNLQERLRALR 177 >UniRef50_P69771 Cluster: Vacuolar protein-sorting-associated protein 46; n=14; Eukaryota|Rep: Vacuolar protein-sorting-associated protein 46 - Saccharomyces cerevisiae (Baker's yeast) Length = 204 Score = 37.1 bits (82), Expect = 0.42 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +3 Query: 6 VDNLLQQVADEAGLELNMELP-SGVPSTSIGTATVVSQEQDELTQRLARLR 155 VD L+ +VADE G+EL VP V +++D+L QRL LR Sbjct: 153 VDELMSKVADENGMELKQSAKLDNVPEIKAKEVNVDDEKEDKLAQRLRALR 203 >UniRef50_A2Q7C4 Cluster: Remark: RAD52 Inhibitor; n=9; Eurotiomycetidae|Rep: Remark: RAD52 Inhibitor - Aspergillus niger Length = 211 Score = 34.7 bits (76), Expect = 2.3 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Frame = +3 Query: 3 DVDNLLQQVADEAGLELNMEL---PSGVPSTSIGTATVVSQE-QDELTQRLARLR 155 DVD L++Q+AD+AG++L M L + P + V E +D L RL LR Sbjct: 154 DVDRLMEQLADDAGVDLRMALEQDAAAAPKEEVKAPKQVDTELEDGLDARLRALR 208 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 625,822,643 Number of Sequences: 1657284 Number of extensions: 11809048 Number of successful extensions: 26129 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 25079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26115 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56611575523 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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