Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0462
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.51 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.1  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   3.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 12  FFTPSNSRQA---KDLVSVLQEANQIISPQL 95
           FF+P   R     K LV V +  NQ+ +PQL
Sbjct: 73  FFSPKIKRMVLLHKTLVRVAKSLNQVFAPQL 103


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 282 LRNANKNLIYSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVH 160
           ++ ++ N + +  ++  +  PF   C  C    + RHHLVH
Sbjct: 226 MKFSDSNQLKAHVLIHTNEKPF--ECDKCRGRFRRRHHLVH 264


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 342 VISKQDLQIITFIYITRIHPLRNANKNLIYSRQIV 238
           +++K   Q +T + IT+        KNL+YS+QIV
Sbjct: 65  ILAKYRQQDVTLLQITKA-------KNLLYSKQIV 92


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 303 YITRIHPLRNANKNLI 256
           Y+   HPL  +NKN I
Sbjct: 45  YVKHFHPLALSNKNAI 60


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 526 YMNLTTLFYLENFRVRMHYFANLG*NHNKKISQF*HNINS 407
           Y N   LFYL  F V + Y+A+L    N   +   +N N+
Sbjct: 321 YCNFIILFYLSVF-VILVYYASLDETPNPVTNGKLYNFNT 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,809
Number of Sequences: 336
Number of extensions: 2705
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)