Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0462
         (622 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo...    49   1e-05
U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72 prot...    49   1e-05
CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.                49   1e-05
BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    49   1e-05
AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17...    49   1e-05
X52104-1|CAA36324.1|  614|Homo sapiens protein ( Human mRNA for ...    48   3e-05
X15729-1|CAA33751.1|  614|Homo sapiens protein ( Human mRNA for ...    48   3e-05
BT006943-1|AAP35589.1|  614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp...    48   3e-05
BC016027-1|AAH16027.1|  614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    48   3e-05
AF015812-1|AAB84094.1|  614|Homo sapiens RNA helicase p68 protein.     48   3e-05
BC066938-1|AAH66938.1|  648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    31   2.5  
AJ278110-1|CAB92442.1|  648|Homo sapiens DEAD-box protein protein.     31   2.5  
BC093081-1|AAH93081.1|  938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    31   4.3  
BC078667-1|AAH78667.1|  919|Homo sapiens DDX42 protein protein.        31   4.3  
BC015505-1|AAH15505.1|  819|Homo sapiens DDX42 protein protein.        31   4.3  
AF083255-1|AAC32396.1|  709|Homo sapiens RNA helicase-related pr...    31   4.3  
AB036090-1|BAC66466.1|  938|Homo sapiens RNA helicase-related pr...    31   4.3  
AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.     30   7.6  

>Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 650

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 110
           +Y FFTP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 439 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72
           protein.
          Length = 650

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 110
           +Y FFTP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 439 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.
          Length = 652

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 110
           +Y FFTP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 439 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474


>BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 729

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 110
           +Y FFTP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 518 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 553


>AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17
           isoform p82 variant protein.
          Length = 737

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 110
           +Y FFTP N +QA++L+ VL+EANQ I+P+L  + D
Sbjct: 520 AYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 555


>X52104-1|CAA36324.1|  614|Homo sapiens protein ( Human mRNA for p68
           protein. ).
          Length = 614

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQ-LQSMADR 113
           +Y FFTP+N +Q  DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 441 AYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDR 478


>X15729-1|CAA33751.1|  614|Homo sapiens protein ( Human mRNA for
           nuclear p68 protein. ).
          Length = 614

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQ-LQSMADR 113
           +Y FFTP+N +Q  DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 441 AYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDR 478


>BT006943-1|AAP35589.1|  614|Homo sapiens DEAD/H
           (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
           68kDa) protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQ-LQSMADR 113
           +Y FFTP+N +Q  DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 441 AYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDR 478


>BC016027-1|AAH16027.1|  614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 5 protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQ-LQSMADR 113
           +Y FFTP+N +Q  DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 441 AYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDR 478


>AF015812-1|AAB84094.1|  614|Homo sapiens RNA helicase p68 protein.
          Length = 614

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQ-LQSMADR 113
           +Y FFTP+N +Q  DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 441 AYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDR 478


>BC066938-1|AAH66938.1|  648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 43 protein.
          Length = 648

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 113
           S    T ++ R A +L+++L+ ANQ I  +L SMA+R
Sbjct: 587 SITTLTRNDWRVASELINILERANQSIPEELVSMAER 623


>AJ278110-1|CAB92442.1|  648|Homo sapiens DEAD-box protein protein.
          Length = 648

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 113
           S    T ++ R A +L+++L+ ANQ I  +L SMA+R
Sbjct: 587 SITTLTRNDWRVASELINILERANQSIPEELVSMAER 623


>BC093081-1|AAH93081.1|  938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 42 protein.
          Length = 938

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
           +Y   TP +S  A DLV  L+ ANQ +S +L  +A
Sbjct: 598 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 632


>BC078667-1|AAH78667.1|  919|Homo sapiens DDX42 protein protein.
          Length = 919

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
           +Y   TP +S  A DLV  L+ ANQ +S +L  +A
Sbjct: 579 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 613


>BC015505-1|AAH15505.1|  819|Homo sapiens DDX42 protein protein.
          Length = 819

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
           +Y   TP +S  A DLV  L+ ANQ +S +L  +A
Sbjct: 479 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 513


>AF083255-1|AAC32396.1|  709|Homo sapiens RNA helicase-related
           protein protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
           +Y   TP +S  A DLV  L+ ANQ +S +L  +A
Sbjct: 479 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 513


>AB036090-1|BAC66466.1|  938|Homo sapiens RNA helicase-related
           protein protein.
          Length = 938

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
           +Y   TP +S  A DLV  L+ ANQ +S +L  +A
Sbjct: 598 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 632


>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
          Length = 1575

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 285 PLRNANKNLIYSRQIVCNHCPP--FGYSCQNC 196
           P ++A   +  SR++VC HCPP   G  C+ C
Sbjct: 758 PGQSACTTIPESREVVCTHCPPGQRGRRCEVC 789


>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 285 PLRNANKNLIYSRQIVCNHCPP--FGYSCQNC 196
           P ++A   +  SR++VC HCPP   G  C+ C
Sbjct: 758 PGQSACTTIPESREVVCTHCPPGQRGRRCEVC 789


>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 285 PLRNANKNLIYSRQIVCNHCPP--FGYSCQNC 196
           P ++A   +  SR++VC HCPP   G  C+ C
Sbjct: 758 PGQSACTTIPESREVVCTHCPPGQRGRRCEVC 789


>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
          Length = 1619

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 285 PLRNANKNLIYSRQIVCNHCPP--FGYSCQNC 196
           P ++A   +  SR++VC HCPP   G  C+ C
Sbjct: 802 PGQSACTTIPESREVVCTHCPPGQRGRRCEVC 833


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,722,246
Number of Sequences: 237096
Number of extensions: 1426500
Number of successful extensions: 2364
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)