Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0462
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 47 2e-05
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 47 2e-05
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 47 2e-05
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 47 2e-05
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 47 2e-05
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 47 2e-05
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 47 2e-05
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 47 2e-05
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 47 2e-05
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 47 2e-05
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 45 1e-04
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 45 1e-04
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 42 5e-04
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 42 5e-04
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 35 0.077
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 29 3.8
AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p pro... 29 3.8
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 29 3.8
AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p pro... 29 5.1
AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein. 29 5.1
AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA... 29 5.1
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 630 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 489 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 489 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 489 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 489 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 489 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
S+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 630 SFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 504 AYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 504 AYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 591 AYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 107
+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 591 AYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 35.1 bits (77), Expect = 0.077
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 113
S +FFT + AK+L+ +LQEA Q + +L +MA R
Sbjct: 629 SISFFTREDWAMAKELIEILQEAEQEVPDELHNMARR 665
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 104
+Y F TP SR A D++ + + +I +LQ++
Sbjct: 857 AYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p
protein.
Length = 680
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 104
+Y F TP SR A D++ + + +I +LQ++
Sbjct: 313 AYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 346
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 3 SYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 104
+Y F TP SR A D++ + + +I +LQ++
Sbjct: 857 AYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p
protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 249 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 136
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 249 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 136
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA
protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 249 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 136
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,063,852
Number of Sequences: 53049
Number of extensions: 441374
Number of successful extensions: 952
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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