Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0460
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041812-1|AAH41812.1|  208|Homo sapiens chromosome 20 open read...    35   0.21 

>BC041812-1|AAH41812.1|  208|Homo sapiens chromosome 20 open reading
           frame 58 protein.
          Length = 208

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
 Frame = +3

Query: 198 VTGTFVGYLIIFAGAAAGY*CRL----LHTNGSTSSIRWSV-LPCSSLAVPLLLTDSNIM 362
           +   FV  +I+  G       RL    ++T  +   + W+V + C  L V  LL DS ++
Sbjct: 37  ILANFVHIIIVILGLFGTIQYRLRYVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELL 96

Query: 363 VRARSKTRTWLRPRWP 410
             + S+ R+W R RWP
Sbjct: 97  TFSLSRHRSWWRERWP 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,110,088
Number of Sequences: 237096
Number of extensions: 1833446
Number of successful extensions: 4201
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4201
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)