Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0460
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical p...    30   1.2  
D38632-1|BAA07612.1|  672|Caenorhabditis elegans OSM-3 (kinesin ...    29   2.1  
D14968-1|BAA20996.1|  397|Caenorhabditis elegans kinesin-like pr...    29   2.1  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical...    28   6.3  
Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z68107-1|CAA92132.1|  264|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.          27   8.4  
AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical ...    27   8.4  

>U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical
           protein F42A10.6 protein.
          Length = 176

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 121 WSWHLRVRAWLSTTTVTMQMRISACSSPVP 210
           WSW++    W S  T  +   I AC++ VP
Sbjct: 88  WSWNMATCGWSSVPTFGLLNNIDACTNGVP 117


>D38632-1|BAA07612.1|  672|Caenorhabditis elegans OSM-3 (kinesin
           protein) protein.
          Length = 672

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +2

Query: 155 PLPQLQCRCGYRHARHRYLCRVPHHIRWCGRGLLMQTPSHKRIDIFYSLVGVALFVASGA 334
           PL  +   C     R+R  CR  + + W  RGLL+ T   K ++I   L+G    V+   
Sbjct: 8   PLTIISDTCLELWVRNRGNCRKLYKVFWGTRGLLLGTRDGKALEIDEFLLGTRENVSKFP 67

Query: 335 IIIDRFQHYGK 367
            I+    + G+
Sbjct: 68  AIVGMTPNVGQ 78


>D14968-1|BAA20996.1|  397|Caenorhabditis elegans kinesin-like
           protein protein.
          Length = 397

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +2

Query: 155 PLPQLQCRCGYRHARHRYLCRVPHHIRWCGRGLLMQTPSHKRIDIFYSLVGVALFVASGA 334
           PL  +   C     R+R  CR  + + W  RGLL+ T   K ++I   L+G    V+   
Sbjct: 8   PLTIISDTCLELWVRNRGNCRKLYKVFWGTRGLLLGTRDGKALEIDEFLLGTRENVSKFP 67

Query: 335 IIIDRFQHYGK 367
            I+    + G+
Sbjct: 68  AIVGMTPNVGQ 78


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
            C33B4.3a protein.
          Length = 1110

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 233  EYDEVPDKGTGDEHADIR 180
            +YD+ PD GTGD   +IR
Sbjct: 1017 DYDDDPDSGTGDSDGEIR 1034


>AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical
           protein Y71G12B.26 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 426 IAPLMMANEALAKFLSLISLLP*CWN 349
           + P +  ++AL  FL++++LLP  WN
Sbjct: 163 VTPSLEISQALCGFLAILTLLPVIWN 188


>Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 256 NADSFTQTDRHLLFAGRC 309
           N +SFT T++HL+FA  C
Sbjct: 402 NGESFTLTEKHLVFATDC 419


>Z68107-1|CAA92132.1|  264|Caenorhabditis elegans Hypothetical
           protein F48C5.1 protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 171 NADADIGMLVTGTFVGYLIIFAGAAAGY*CRLLHTNGSTSSIRW 302
           NA   I  L  GT  G  +I     +    R  H NG  +S+RW
Sbjct: 25  NAGEHILRLQEGTHTGTTLIGVEQGSSVLIRCEHPNGKVASLRW 68


>U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 256 NADSFTQTDRHLLFAGRC 309
           N +SFT T++HL+FA  C
Sbjct: 402 NGESFTLTEKHLVFATDC 419


>AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 256 NADSFTQTDRHLLFAGRC 309
           N +SFT T++HL+FA  C
Sbjct: 402 NGESFTLTEKHLVFATDC 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,642,300
Number of Sequences: 27780
Number of extensions: 281693
Number of successful extensions: 720
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)