Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0459
         (298 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   2.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   2.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   6.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   6.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   FCSRAMLICSIIWL 48
           F +  M++C I+WL
Sbjct: 283 FVTVPMIVCPIVWL 296


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 7   FCSRAMLICSIIWL 48
           F +  M++C I+WL
Sbjct: 283 FVTVPMIVCPIVWL 296


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 109 ATSCQRRTEPAEQQP 65
           AT  QRR EP   +P
Sbjct: 320 ATDHQRRNEPKRPRP 334


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 188 GIVLIDLHQLNVKTTSDNT 132
           G ++ ++   N+KTT DNT
Sbjct: 432 GSLVYNVQIENLKTTPDNT 450


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 5/23 (21%), Positives = 15/23 (65%)
 Frame = +3

Query: 105 VAPYSVSLICIV*SCFYVKLMQI 173
           + PY ++L+  +  C Y+ ++++
Sbjct: 185 ILPYFINLLMELQYCHYLNILRV 207


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 5/23 (21%), Positives = 15/23 (65%)
 Frame = +3

Query: 105 VAPYSVSLICIV*SCFYVKLMQI 173
           + PY ++L+  +  C Y+ ++++
Sbjct: 185 ILPYFINLLMELQYCHYLNILRV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,328
Number of Sequences: 336
Number of extensions: 957
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)