Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0458
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.1  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   2.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.7  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -3

Query: 505 LFIAFAKSVVEKMKK 461
           LF A A+SVVEKM+K
Sbjct: 156 LFNANARSVVEKMRK 170


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 352 YNLRRTFEDKKEQCENI 302
           Y+L+R F+DK EQ + +
Sbjct: 19  YSLKRHFQDKHEQSDTL 35


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 669 VRKQLSYHCRTKNGLAVRSRR 607
           VRK LSY CR +    +  R+
Sbjct: 138 VRKDLSYACREEKSCIIDKRQ 158


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 669 VRKQLSYHCRTKNGLAVRSRR 607
           VRK LSY CR +    +  R+
Sbjct: 138 VRKDLSYACREEKSCIIDKRQ 158


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 438 GLRRSGSGLCFTVTF 394
           G++R  +G CFTV +
Sbjct: 722 GIQRFAAGFCFTVVY 736


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 110 RRRACELNAPPRRRVNLTSWV 172
           R + CEL+  PR++    SW+
Sbjct: 385 RMQHCELHMQPRKKNCCRSWL 405


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 110 RRRACELNAPPRRRVNLTSWV 172
           R + CEL+  PR++    SW+
Sbjct: 385 RMQHCELHMQPRKKNCCRSWL 405


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 587 RKNPPQGRRDLTAR 628
           + NPP+G  D TA+
Sbjct: 330 KNNPPKGAADFTAQ 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,877
Number of Sequences: 438
Number of extensions: 4343
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)