Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0457
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.85 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.85 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -2

Query: 290 VLNSPKNVLRVIENAAAIQLCAFTTMIKNKTS 195
           + + P  V   ++    + +C++T +I+NK S
Sbjct: 161 IFDVPNFVNEYVQAIEVLYICSYTVLIRNKIS 192


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 226 AQS*MAAAFSITRNTFLGLFKTI 294
           AQ   A  F I+R+TFLG+  TI
Sbjct: 321 AQITAANFFDISRSTFLGILATI 343


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 279 P*KCITCDRKRCRHSALCFHY 217
           P +C+ C R     SAL  HY
Sbjct: 134 PNQCVICHRVLSCKSALQMHY 154


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 557 TVHRILICVISCILC 513
           T+H +  CV+  +LC
Sbjct: 223 TIHLLFYCVLIILLC 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,739
Number of Sequences: 336
Number of extensions: 1951
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)