Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0456
(753 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 165 1e-39
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 163 4e-39
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 159 5e-38
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 159 7e-38
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 158 2e-37
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 151 1e-35
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 147 3e-34
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 133 5e-30
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 131 2e-29
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 130 4e-29
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 130 5e-29
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 128 1e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 126 6e-28
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 126 6e-28
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 124 2e-27
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 124 2e-27
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 124 3e-27
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 123 5e-27
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 122 1e-26
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 122 1e-26
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 120 5e-26
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 120 5e-26
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 118 1e-25
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 116 5e-25
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 116 8e-25
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 114 2e-24
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 114 3e-24
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 112 8e-24
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 111 2e-23
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 111 2e-23
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 110 3e-23
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 110 3e-23
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 109 5e-23
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 107 3e-22
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 107 4e-22
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 106 7e-22
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 106 7e-22
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 105 9e-22
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 105 9e-22
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 105 9e-22
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 105 1e-21
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 105 2e-21
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 105 2e-21
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 103 5e-21
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 103 6e-21
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 102 1e-20
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 101 1e-20
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 101 1e-20
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 101 2e-20
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 101 3e-20
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 101 3e-20
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 101 3e-20
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 101 3e-20
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 101 3e-20
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 100 3e-20
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 100 4e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 99 6e-20
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 99 6e-20
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 100 8e-20
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 99 1e-19
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 99 1e-19
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 1e-19
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 99 1e-19
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 99 1e-19
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 98 2e-19
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 98 2e-19
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 98 2e-19
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 97 5e-19
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 97 5e-19
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 96 7e-19
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 96 7e-19
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 96 7e-19
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 96 7e-19
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 96 9e-19
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 95 1e-18
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 95 1e-18
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 95 2e-18
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 95 2e-18
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 95 2e-18
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 3e-18
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 94 4e-18
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 93 5e-18
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 93 7e-18
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 92 1e-17
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 2e-17
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 91 3e-17
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 3e-17
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 91 4e-17
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 4e-17
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 90 5e-17
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 90 5e-17
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 90 6e-17
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 90 6e-17
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 90 6e-17
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 89 8e-17
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 89 8e-17
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 89 8e-17
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 89 8e-17
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 89 8e-17
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 89 1e-16
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 89 1e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 89 1e-16
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 88 3e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 88 3e-16
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 88 3e-16
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 88 3e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 87 3e-16
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 87 3e-16
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 87 3e-16
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 87 3e-16
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 87 4e-16
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 87 4e-16
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 87 6e-16
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 86 8e-16
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 86 8e-16
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 86 8e-16
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 86 1e-15
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 85 1e-15
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 85 1e-15
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 85 1e-15
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 85 1e-15
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 85 2e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 85 2e-15
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 85 2e-15
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 85 2e-15
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 84 3e-15
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 84 3e-15
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 84 3e-15
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 84 3e-15
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 84 3e-15
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 84 3e-15
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 3e-15
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 84 4e-15
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 84 4e-15
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 83 5e-15
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 83 7e-15
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 83 7e-15
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 83 9e-15
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 82 1e-14
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 82 1e-14
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 82 2e-14
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 82 2e-14
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 82 2e-14
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 82 2e-14
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 81 2e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 81 2e-14
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 81 2e-14
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 81 2e-14
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 81 2e-14
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 81 3e-14
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 81 3e-14
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 81 3e-14
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 81 3e-14
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 81 3e-14
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 81 4e-14
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 81 4e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 80 5e-14
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 80 5e-14
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 80 5e-14
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 80 7e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 7e-14
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 7e-14
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 80 7e-14
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 7e-14
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 79 9e-14
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 79 9e-14
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 79 9e-14
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 79 9e-14
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 79 9e-14
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 79 1e-13
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 79 1e-13
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 79 1e-13
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 79 1e-13
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 79 1e-13
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 79 2e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 79 2e-13
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 79 2e-13
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 79 2e-13
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 79 2e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 78 2e-13
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 78 2e-13
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 78 2e-13
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 78 2e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 78 2e-13
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 78 3e-13
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 78 3e-13
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 78 3e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 78 3e-13
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 4e-13
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 77 4e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 77 4e-13
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 77 4e-13
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 77 4e-13
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 77 5e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 77 5e-13
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 5e-13
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 77 5e-13
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 77 5e-13
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 77 5e-13
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 77 5e-13
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 77 5e-13
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 77 5e-13
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 77 6e-13
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 77 6e-13
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 77 6e-13
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 6e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 77 6e-13
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 76 8e-13
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 76 8e-13
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 76 8e-13
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 8e-13
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 76 8e-13
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 76 8e-13
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 76 1e-12
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 76 1e-12
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 76 1e-12
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 76 1e-12
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 76 1e-12
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 76 1e-12
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 75 1e-12
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 75 1e-12
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 75 1e-12
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 1e-12
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 75 2e-12
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 75 2e-12
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 75 2e-12
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 75 2e-12
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 75 2e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 75 2e-12
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 75 2e-12
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 75 2e-12
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 75 3e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 3e-12
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 75 3e-12
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 74 3e-12
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 74 3e-12
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 74 3e-12
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 3e-12
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 74 3e-12
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 74 4e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 74 4e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 74 4e-12
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 74 4e-12
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 74 4e-12
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 74 4e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 74 4e-12
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 4e-12
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 74 4e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 73 6e-12
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 73 6e-12
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 73 6e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 6e-12
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 73 8e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 8e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 73 8e-12
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 73 8e-12
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 73 8e-12
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 73 8e-12
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 73 8e-12
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 1e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 73 1e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 72 1e-11
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 72 1e-11
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 72 1e-11
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 72 1e-11
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 1e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 1e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 72 1e-11
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 72 1e-11
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 72 2e-11
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 2e-11
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 72 2e-11
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 71 2e-11
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 71 2e-11
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 71 2e-11
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 71 2e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 2e-11
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 71 3e-11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 3e-11
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 71 3e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 71 3e-11
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 3e-11
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 71 3e-11
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 71 3e-11
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 71 3e-11
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 71 3e-11
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 71 4e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 71 4e-11
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 4e-11
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 71 4e-11
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 71 4e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 70 5e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 70 5e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 70 5e-11
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 70 5e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 70 7e-11
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 70 7e-11
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 70 7e-11
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 70 7e-11
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 70 7e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 69 9e-11
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 69 9e-11
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q4SYP5 Cluster: Chromosome undetermined SCAF11993, whol... 69 1e-10
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 69 1e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 69 1e-10
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 69 1e-10
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 69 1e-10
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 69 2e-10
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 69 2e-10
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 2e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 68 2e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 68 2e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 68 2e-10
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 68 2e-10
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 68 3e-10
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 68 3e-10
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 68 3e-10
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 68 3e-10
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 3e-10
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 67 4e-10
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 67 4e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 67 4e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 67 4e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 67 4e-10
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 67 5e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 67 5e-10
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 67 5e-10
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 67 5e-10
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 67 5e-10
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 67 5e-10
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 67 5e-10
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 67 5e-10
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 66 7e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 66 7e-10
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 66 7e-10
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 66 7e-10
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 66 7e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 66 7e-10
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 66 7e-10
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 7e-10
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 66 7e-10
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 66 9e-10
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 66 9e-10
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 66 9e-10
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 66 9e-10
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 9e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 1e-09
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 1e-09
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 66 1e-09
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 66 1e-09
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 66 1e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 65 2e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 65 2e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 65 2e-09
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 65 2e-09
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 65 2e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 65 2e-09
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 65 2e-09
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 65 2e-09
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 65 2e-09
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 65 2e-09
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 65 2e-09
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 65 2e-09
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 64 3e-09
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 64 3e-09
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 64 3e-09
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 64 3e-09
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 64 3e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 64 4e-09
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 64 4e-09
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 64 4e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 64 4e-09
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 64 4e-09
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 64 5e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 5e-09
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 64 5e-09
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 64 5e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 64 5e-09
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 5e-09
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 64 5e-09
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 64 5e-09
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 64 5e-09
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 63 6e-09
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 63 6e-09
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 63 6e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 63 6e-09
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 63 6e-09
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 63 6e-09
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 63 6e-09
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 63 6e-09
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 63 6e-09
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 63 6e-09
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 63 6e-09
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 63 8e-09
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 63 8e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 63 8e-09
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 63 8e-09
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 63 8e-09
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 63 8e-09
UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain, p... 63 8e-09
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 63 8e-09
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 63 8e-09
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 63 8e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 63 8e-09
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 63 8e-09
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 63 8e-09
UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whol... 62 1e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 62 1e-08
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 62 1e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 62 1e-08
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 62 1e-08
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 62 1e-08
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 62 1e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 62 1e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 62 1e-08
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 62 1e-08
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 62 1e-08
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 62 1e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 62 1e-08
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 62 2e-08
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 62 2e-08
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 62 2e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 62 2e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 62 2e-08
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 2e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 61 2e-08
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 61 3e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 61 3e-08
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 165 bits (400), Expect = 1e-39
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFL G+TNL+RCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTLMWSATW
Sbjct: 410 ATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATW 469
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEVK+LAED+LG+YIQINIGSL+L
Sbjct: 470 PKEVKQLAEDFLGNYIQINIGSLEL 494
Score = 149 bits (360), Expect = 1e-34
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +SYVRN
Sbjct: 326 KTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRN 385
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TCVFGGAPK Q RDL+RG EIVI
Sbjct: 386 TCVFGGAPKGGQMRDLQRGCEIVI 409
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
SANHNI Q+VD+C E KE KL LL +I + E K IIFVETKR+ +N+ R IR +G
Sbjct: 495 SANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFG 554
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+HGDK+Q ERD VL +F
Sbjct: 555 VRCGAIHGDKSQSERDFVLREF 576
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 163 bits (396), Expect = 4e-39
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFLE+G TNL+RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ LMWSATW
Sbjct: 360 ATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 419
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEV+ LAED+L DYIQINIGSL L
Sbjct: 420 PKEVQALAEDFLHDYIQINIGSLNL 444
Score = 123 bits (296), Expect = 5e-27
Identities = 60/86 (69%), Positives = 69/86 (80%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS--YV 176
QTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG S +
Sbjct: 274 QTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLI 333
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R TC+FGGA K Q RDLERGVE+VI
Sbjct: 334 RYTCIFGGALKGPQVRDLERGVEVVI 359
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
+ SANHNI QIVD+C+E EKE KL LL+EI S + +K IIFVETK+K E++ +NI
Sbjct: 442 LNLSANHNIHQIVDVCEEGEKEGKLLSLLKEI--SSDVNSKIIIFVETKKKVEDLLKNIV 499
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
R G+ A +HGDK+Q ERD VL F
Sbjct: 500 RDGYGATSIHGDKSQSERDYVLQDF 524
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 159 bits (387), Expect = 5e-38
Identities = 74/94 (78%), Positives = 82/94 (87%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ +TPGRLIDFLE+G TNL+RCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 242 LERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDR 301
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
Q LMWSATWPKEV+ LAE++L DYIQINIGSL L
Sbjct: 302 QVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNL 335
Score = 136 bits (330), Expect = 4e-31
Identities = 66/84 (78%), Positives = 69/84 (82%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA DFG N
Sbjct: 167 QTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANN 226
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TCVFGGAPK Q RDLERG EIVI
Sbjct: 227 TCVFGGAPKGPQIRDLERGAEIVI 250
Score = 107 bits (258), Expect = 2e-22
Identities = 52/85 (61%), Positives = 64/85 (75%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
+ SANHNILQIVD+C+++EK+ KL LL EI E KTIIFVETKR+ ++I+RNI
Sbjct: 333 LNLSANHNILQIVDVCEDYEKDQKLMKLLTEISAENE--TKTIIFVETKRRVDDITRNIN 390
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
R GW AV +HGDK+QQERD VL F
Sbjct: 391 RNGWRAVSIHGDKSQQERDYVLNAF 415
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 159 bits (386), Expect = 7e-38
Identities = 70/85 (82%), Positives = 82/85 (96%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFLE+GTT+L+RCTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQ LMWSATW
Sbjct: 286 ATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATW 345
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEV++LAE++L +YIQ+NIGSL L
Sbjct: 346 PKEVRQLAEEFLNNYIQVNIGSLSL 370
Score = 153 bits (370), Expect = 6e-36
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG ++VRN
Sbjct: 202 QTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRN 261
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC+FGGAPK +QARDLERGVEIVI
Sbjct: 262 TCIFGGAPKGQQARDLERGVEIVI 285
Score = 100 bits (240), Expect = 3e-20
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
++ SANHNILQIVD+C E+EK KL LL +I E KTIIFVETK++ + I+RNI
Sbjct: 368 LSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENE--TKTIIFVETKKRVDEITRNIS 425
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
R GW A +HGDK+QQERD VL F
Sbjct: 426 RQGWRACAIHGDKSQQERDFVLSSF 450
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 158 bits (383), Expect = 2e-37
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFLE GTTNL+R TYLVLDEADRMLDMGFEPQIRKII QIRPDRQ LMWSATW
Sbjct: 230 ATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATW 289
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKE++KLAE++L +YIQINIGSL L
Sbjct: 290 PKEIRKLAEEFLREYIQINIGSLNL 314
Score = 134 bits (323), Expect = 3e-30
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG + N
Sbjct: 146 KTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMN 205
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC+FGGA K QA DL RGVEIVI
Sbjct: 206 TCIFGGASKHPQADDLRRGVEIVI 229
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
+ +AN NI+QI++ C+E+EKE +L LL E+ SQ+ +K+IIFVETKRK + I+ I+
Sbjct: 312 LNLAANENIMQIIECCEEYEKETRLFKLLTEL--SQQGDSKSIIFVETKRKVDQITNVIK 369
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
R GW +HGDKTQ++RD VL F
Sbjct: 370 RNGWRCDGIHGDKTQKDRDYVLNTF 394
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 151 bits (367), Expect = 1e-35
Identities = 71/94 (75%), Positives = 79/94 (84%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G +TPGRLID LE G TNL+R TYLVLDEADRMLDMGFEPQIRKII QIRPDR
Sbjct: 254 LSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 313
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
QTLMWSATWPKEV+ LA D+L D+IQ+NIGS++L
Sbjct: 314 QTLMWSATWPKEVRALASDFLQDFIQVNIGSMEL 347
Score = 119 bits (287), Expect = 7e-26
Identities = 56/84 (66%), Positives = 64/84 (76%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG +S +RN
Sbjct: 179 ETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRN 238
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TCV+GG PK Q RDL RGVE+ I
Sbjct: 239 TCVYGGVPKGPQIRDLSRGVEVCI 262
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ANH I QIV++ E EK +++ ++++ +++E K +IFV TKR A+ I+R +R+ G
Sbjct: 348 AANHRITQIVEVVTEMEKRDRMIKHMEKVMENKEN--KILIFVGTKRVADEITRFLRQDG 405
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
WPA+ +HGDK Q ERD VL QF
Sbjct: 406 WPALSIHGDKQQNERDWVLDQF 427
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 147 bits (356), Expect = 3e-34
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFL TNL+RC+YLVLDEADRMLDMGFEPQIR IIEQIRPD QTLMWSATW
Sbjct: 216 ATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSATW 275
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P V +L +DYL DYIQIN+GSL+L
Sbjct: 276 PDAVSRLVKDYLKDYIQINVGSLKL 300
Score = 124 bits (300), Expect = 2e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++N
Sbjct: 132 KTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKN 191
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC+FGG KR+Q DL+ GVEIVI
Sbjct: 192 TCLFGGGAKRQQGDDLKYGVEIVI 215
Score = 110 bits (265), Expect = 3e-23
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ANHNILQI+D+CQEHEKE KL++LL+EI +E KTIIF+ETK++ ++I+R + R G
Sbjct: 301 AANHNILQIIDVCQEHEKEAKLSILLREIMAEKE--CKTIIFIETKKRVDDITRKVLRDG 358
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
WPA+C+HGDK+Q+ER+ L F
Sbjct: 359 WPAMCIHGDKSQREREYTLNSF 380
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 133 bits (321), Expect = 5e-30
Identities = 62/82 (75%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 439
PGRLID LE+G TNL R TYLVLDEADRMLDMGFEPQIRK++ QIRPDRQTL+WSATWPK
Sbjct: 119 PGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPK 178
Query: 440 EVKKLAEDYLGDY-IQINIGSL 502
EV+KLA D + I IN+GS+
Sbjct: 179 EVQKLARDLCKEIPIHINVGSV 200
Score = 106 bits (254), Expect = 7e-22
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG +RN
Sbjct: 33 ETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRN 92
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T ++GG PKR Q + GVEI I
Sbjct: 93 TAIYGGVPKRPQQASIRNGVEICI 116
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/93 (39%), Positives = 59/93 (63%)
Frame = +1
Query: 475 LHSDQYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKA 654
+H + + A+HNI Q V++ +E EK+ +L + L ++ P K +IF ETKR A
Sbjct: 193 IHINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAP--KVLIFCETKRGA 250
Query: 655 ENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +++ +R GWPA+C+HGDK Q+ER VL +F
Sbjct: 251 DILTKELRLDGWPALCIHGDKKQEERTWVLNEF 283
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 131 bits (316), Expect = 2e-29
Identities = 62/84 (73%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 439
PGRLID LE+ TNL R TYLVLDEAD+MLDMGFE QIRKI++QIRPDRQTLMWSATWPK
Sbjct: 244 PGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPK 303
Query: 440 EVKKLAEDYLGDY-IQINIGSLQL 508
EV+ LA+D + IQ+N+GSL L
Sbjct: 304 EVQALAKDLCKEQPIQVNVGSLTL 327
Score = 107 bits (256), Expect = 4e-22
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F S +RN
Sbjct: 158 ETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRN 217
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC +GG PK Q L++GV I+I
Sbjct: 218 TCAYGGVPKSGQIYALKQGVHILI 241
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 130 bits (314), Expect = 4e-29
Identities = 60/85 (70%), Positives = 72/85 (84%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID +E TNL+R TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 196 ATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATW 255
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEV++LA ++L D ++ IGS +L
Sbjct: 256 PKEVEQLARNFLFDPYKVIIGSEEL 280
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 161
+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 138 ETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
Score = 77.4 bits (182), Expect = 4e-13
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 484 DQYRIITTS----ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 651
D Y++I S ANH I Q V+I E +K NKL LL++I G++ +IF++TK+
Sbjct: 269 DPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMD----GSRILIFMDTKKG 324
Query: 652 AENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ I+R +R GWPA+ +HGDK+Q ERD VL +F
Sbjct: 325 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 358
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 130 bits (313), Expect = 5e-29
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID LE G TNL+R TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATW
Sbjct: 380 ATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATW 439
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P+EV+ LA +L + ++ IGS L
Sbjct: 440 PREVESLARQFLQNPYKVIIGSPDL 464
Score = 121 bits (291), Expect = 2e-26
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG S R+
Sbjct: 296 QTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRS 355
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC++GGAPK Q RDL RGVEIVI
Sbjct: 356 TCIYGGAPKGPQIRDLRRGVEIVI 379
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
ANH+I QI+++ EHEK +L+ LL ++ G++ +IF +TK+ + ++R +R GW
Sbjct: 466 ANHSIQQIIEVISEHEKYPRLSKLLSDLMD----GSRILIFFQTKKDCDKVTRQLRMDGW 521
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
PA+ +HGDK Q ERD VL +F
Sbjct: 522 PALSIHGDKAQAERDYVLAEF 542
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 128 bits (310), Expect = 1e-28
Identities = 62/84 (73%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 439
PGRLIDFLE TNL+R TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWPK
Sbjct: 341 PGRLIDFLESSVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPK 400
Query: 440 EVKKLAEDYLG-DYIQINIGSLQL 508
EV L+ L + + +NIGSL L
Sbjct: 401 EVIALSRSLLSHEVVHVNIGSLDL 424
Score = 108 bits (260), Expect = 1e-22
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG +S ++
Sbjct: 255 ETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKT 314
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ +GG PKR Q L RGVEI+I
Sbjct: 315 SVAYGGVPKRFQTIALRRGVEILI 338
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +1
Query: 517 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 696
HNI Q V I +E EK KL LL+++ G K +IF ETK+ A+ ++R +R GWPA
Sbjct: 428 HNIEQNVFILEEREKRVKLKELLKKLMD----GGKILIFSETKKGADTLTRELRLDGWPA 483
Query: 697 VCMHGDKTQQERDEVLYQF 753
+C+HGDK Q+ER VL +F
Sbjct: 484 LCIHGDKKQEERTWVLNEF 502
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 126 bits (304), Expect = 6e-28
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG +S ++N
Sbjct: 141 ETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKN 200
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC++GG PK Q RDL++GVEIVI
Sbjct: 201 TCIYGGVPKGPQVRDLQKGVEIVI 224
Score = 97.5 bits (232), Expect = 3e-19
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID LE TNL+R T +VLDEADRMLDMGFEPQIRK I PDRQTL WSATW
Sbjct: 225 ATPGRLIDMLESNHTNLRRVT-IVLDEADRMLDMGFEPQIRKCISD-TPDRQTLYWSATW 282
Query: 434 PKEVKKLA 457
PK V ++
Sbjct: 283 PKNVNHVS 290
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
+K NKL LL++I G++ +IF T + + ++R +R GWPA+ +HGDK+Q ERD
Sbjct: 300 QKYNKLVKLLEDIMD----GSRILIF-RTLKGCDQVTRQLRMDGWPALSIHGDKSQAERD 354
Query: 736 EVLYQF 753
VL +F
Sbjct: 355 WVLSEF 360
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 126 bits (304), Expect = 6e-28
Identities = 61/99 (61%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Frame = +2
Query: 221 PGLGEGSRNSH---STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 391
P LG R H +TPGRLIDFL+ NL R TYLVLDEADRMLDMGFEPQ+RKI Q
Sbjct: 216 PQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQ 275
Query: 392 IRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
IRPDRQT+M+SATWP+E+++LA ++ +I+I++GS +L
Sbjct: 276 IRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTEL 314
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++ V
Sbjct: 147 KTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKV-IPGDVYC 205
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GGAPK Q L RGV I++
Sbjct: 206 GCVYGGAPKGPQLGLLRRGVHILV 229
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/81 (33%), Positives = 51/81 (62%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN ++ Q + QE K+++L L+QE + + ++F + KR A+ + R +RR+G+
Sbjct: 316 ANKDVTQRFILTQEFAKQDELRKLMQEHREE-----RVLVFCKMKRTADELERQLRRWGY 370
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
A+ +HGDK Q++R+ +L +F
Sbjct: 371 DAMAIHGDKEQRQREFILARF 391
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 124 bits (300), Expect = 2e-27
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRA 217
A +CAH+ W+ FG G ++ + SA R + H+ V C+ +
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 218 SPGLGEGSRNSHSTPGRLIDFLEKGTTN-LQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 394
+PG GE + H R L G + L+RCTYLVLDEADRMLDMGFEPQIRKI++QI
Sbjct: 233 NPGSGERCGDLHRH-ARASHRLPGGREDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI 291
Query: 395 RPDRQTLMWSATWPKE 442
RPDRQTLMWSATWPKE
Sbjct: 292 RPDRQTLMWSATWPKE 307
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 124 bits (299), Expect = 2e-27
Identities = 59/85 (69%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFLE +L+R TYLVLDEADRMLDMGFEP IRKI+ QIRPDRQTLM+SATW
Sbjct: 342 ATPGRLIDFLESNVIDLKRVTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATW 401
Query: 434 PKEVKKLAEDYL-GDYIQINIGSLQ 505
P+ V++LA D+ GD I I IG ++
Sbjct: 402 PQTVRRLALDFCHGDPIHIQIGDME 426
Score = 109 bits (262), Expect = 7e-23
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG + +
Sbjct: 258 QTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISS 317
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GGAPK Q ++L G +IVI
Sbjct: 318 VCVYGGAPKIYQEKELRNGCDIVI 341
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/82 (31%), Positives = 53/82 (64%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ N++I Q V+I + +K +++ +L + +S KTIIF +TK+ +++S+ ++
Sbjct: 428 NVNNDIDQQVEIIDKSQKYDRVKEILSTMTRSD----KTIIFTQTKKDCDDLSKALQTDN 483
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+C+HGDK+Q++RD+V+ F
Sbjct: 484 IRNICIHGDKSQRDRDKVMDLF 505
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 124 bits (298), Expect = 3e-27
Identities = 57/94 (60%), Positives = 73/94 (77%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L EG+ +TPGRLID ++G L R T+LVLDEADRMLDMGFEPQ+RKII + +R
Sbjct: 207 LHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANR 266
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
QTLMWSATWP+EV+ LAE Y+ +YIQ+ +G+ +L
Sbjct: 267 QTLMWSATWPREVRGLAESYMNEYIQVVVGNEEL 300
Score = 104 bits (249), Expect = 3e-21
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F +R+
Sbjct: 132 QTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRS 191
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T V+GGA + Q R L G E+VI
Sbjct: 192 TAVYGGASSQPQIRALHEGAEVVI 215
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N I QIV++C EKE+KL +L G K I+F KR +++ + R G+
Sbjct: 303 NSKIKQIVEVCSGREKEDKLIGVLDNF-----KGDKVIVFCNMKRTCDDLEYVLNRSGYG 357
Query: 694 AVCMHGDKTQQERDEVLYQF 753
A +HGDK+Q RD+VL F
Sbjct: 358 AAALHGDKSQNIRDKVLDDF 377
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 123 bits (296), Expect = 5e-27
Identities = 60/86 (69%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFLE TT L+R TYLVLDEADRMLDMGFE QIRKI+ QIRPDRQTLM+SATW
Sbjct: 230 ATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATW 289
Query: 434 PKEVKKLAEDYLGDY-IQINIGSLQL 508
PK V+ LA+DY + + + IG +L
Sbjct: 290 PKNVQNLAQDYCKNTPVYVQIGKHEL 315
Score = 107 bits (256), Expect = 4e-22
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG +S ++
Sbjct: 146 ETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKC 205
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C++GGA K Q L++GV++VI
Sbjct: 206 ACIYGGADKYSQRALLQQGVDVVI 229
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N I QIV + + +K N+L L + Q K +IF +TK+ E++SR + + G+
Sbjct: 318 NERIKQIVYVTDQSKKINQLIKQLDCLTQKD----KVLIFAQTKKGCESMSRILNKEGFK 373
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HGDK Q++RD V+ +F
Sbjct: 374 CLAIHGDKAQKDRDYVMNKF 393
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 122 bits (294), Expect = 1e-26
Identities = 57/95 (60%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ +TPGRL++FL GT L R +Y V+DEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 438 LQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDR 497
Query: 407 QTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQL 508
QTLM+SATWP E+K+LA ++ + I I +G L+L
Sbjct: 498 QTLMFSATWPSEIKRLASEFCKANSIYIQVGDLEL 532
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A + +R
Sbjct: 364 QTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYSRLLNLRL 422
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GGA K Q R+L+ G EI++
Sbjct: 423 VPIYGGASKFAQVRELQNGAEIMV 446
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN NI Q V+ +E +KL L I P K +IF + K A+ ++ +R
Sbjct: 533 TANPNIRQNVEFPNSYEVRDKLFDFLGSI----PPEKKVLIFSDLKSFADQLTSALRYRR 588
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ + +HG+KTQ +R+ +L F
Sbjct: 589 FKSASLHGNKTQAQRERILNMF 610
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 122 bits (293), Expect = 1e-26
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID LE TNL R TYL LDEADRMLDMGFE QIRKI QIR DRQTLM+SATW
Sbjct: 275 ATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRTDRQTLMFSATW 334
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P+E++ LA + D+++++IGS +L
Sbjct: 335 PREIRNLAASFQKDFVRVHIGSEEL 359
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVR 179
+TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ + +
Sbjct: 190 KTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIM 249
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
TCV+GG PK Q R L GV + I
Sbjct: 250 TTCVYGGTPKGPQQRALRAGVHVCI 274
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 120 bits (288), Expect = 5e-26
Identities = 51/85 (60%), Positives = 71/85 (83%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDF+++G T+L RCT+L+LDEADRML+MGFE Q++ II QIRPDRQT+MW+ATW
Sbjct: 282 ATPGRLIDFIKRGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATW 341
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P+ +++ A ++ +QINIG+ L
Sbjct: 342 PQAIQQFALGFMFHPLQINIGNPDL 366
Score = 77.0 bits (181), Expect = 5e-13
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN ++ QI+++CQE ++++K+N +++ IG + K +IFV+TKR A+N+ +R +
Sbjct: 368 ANESVKQIIEVCQERDRDSKMNEIVKRIGSEK----KVLIFVKTKRSADNLCYKLRDQRY 423
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
CMHGDK Q ERD L F
Sbjct: 424 RVACMHGDKVQAERDRALSDF 444
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F + ++
Sbjct: 198 ETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFTKGTAIKT 257
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
FGG P+ Q +D + G +I +
Sbjct: 258 VRCFGGVPQSSQMKDFQSGCDICV 281
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 120 bits (288), Expect = 5e-26
Identities = 53/82 (64%), Positives = 69/82 (84%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D LE +L + +YLVLDEADRMLDMGFEPQIRKI++Q++P RQTLM++ATW
Sbjct: 359 ATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATW 418
Query: 434 PKEVKKLAEDYLGDYIQINIGS 499
PKEV+K+A D L + +Q+NIG+
Sbjct: 419 PKEVRKIASDLLSNPVQVNIGN 440
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG +S + +
Sbjct: 276 KTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFGRSSRISS 334
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C++GGAPK Q RDLERG +IV+
Sbjct: 335 VCLYGGAPKGPQLRDLERGADIVV 358
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI-RRYG 687
AN +I Q VD+ EK +L+ +L+ SQEPG+K IIF TKR + ++RN+ R+YG
Sbjct: 446 ANKSITQYVDVITPPEKSRRLDQILR----SQEPGSKIIIFCSTKRMCDQLARNLARQYG 501
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
A +HGDK+Q ERD VL +F
Sbjct: 502 --ASAIHGDKSQAERDSVLSEF 521
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 118 bits (285), Expect = 1e-25
Identities = 56/95 (58%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G + + PGRLID L++G T L++ ++LVLDEADRMLDMGFEPQIRKI++QIRP R
Sbjct: 251 LRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQR 310
Query: 407 QTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQL 508
QT+++SATWPKEV+KLA D+ + + I IG+++L
Sbjct: 311 QTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVEL 345
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F S +
Sbjct: 179 QTGSGKTLAFLLPAIVHILAQA---RSHDPKCLILAPTRELTLQIYDQFQKFSVGSQLYA 235
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C++GG + Q L +G +I+I
Sbjct: 236 ACLYGGQDRYIQKSQLRKGPQILI 259
Score = 40.3 bits (90), Expect = 0.050
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
K +IF TK+ + + + + R G + +HGDK Q ERD V+ F
Sbjct: 396 KILIFCSTKKGCDQLQKTLDREGIRCLALHGDKKQTERDYVMSHF 440
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 116 bits (280), Expect = 5e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D +++G ++ TYL+LDEADRMLDMGFEPQIRK++ +RPDRQT+M SATW
Sbjct: 235 ATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATW 294
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P V++LA+ Y+ D IQ+ IG+L L
Sbjct: 295 PDGVRRLAQSYMHDPIQVYIGTLDL 319
Score = 82.6 bits (195), Expect = 9e-15
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A + +
Sbjct: 151 QTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG-I 208
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ C++GG +R Q + GVEI+I
Sbjct: 209 KAVCLYGGGDRRAQINVVRNGVEILI 234
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/79 (24%), Positives = 43/79 (54%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+A H + Q++++ E +K ++N ++++ +P K IIF K +A+++S
Sbjct: 320 AATHTVTQVIEVMDEEDKFQRINEFVRDM----QPTDKVIIFCGKKTRADDLSSEFILSN 375
Query: 688 WPAVCMHGDKTQQERDEVL 744
+HG++ Q +R++ L
Sbjct: 376 ISCQAIHGNREQSDREQAL 394
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 116 bits (278), Expect = 8e-25
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D LE +L++ +YLVLDEADRMLDMGFEPQIRKI+++I P RQTLM++ATW
Sbjct: 278 ATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATW 337
Query: 434 PKEVKKLAEDYLGDYIQINIGSL 502
PKEV+++AED L +Q+ IGS+
Sbjct: 338 PKEVRRIAEDLLVHPVQVTIGSV 360
Score = 96.3 bits (229), Expect = 7e-19
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG +S + +
Sbjct: 195 KTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFGRSSRISS 253
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC++GGAPK Q RDL+RGV++V+
Sbjct: 254 TCLYGGAPKGPQLRDLDRGVDVVV 277
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN I Q V++ EK +L +L+ SQ+ G+K +IF TKR + ++R + R +
Sbjct: 365 ANSAITQNVELITPSEKLRRLEQILR----SQDSGSKVLIFCTTKRMCDQLARTLTRQ-F 419
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
A +HGDK+Q ER++VL F
Sbjct: 420 GASAIHGDKSQSEREKVLSHF 440
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 114 bits (275), Expect = 2e-24
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFL+ G N R +LVLDEADRMLDMGFEPQIR II + DR+T M+SATW
Sbjct: 214 ATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDMGFEPQIRAIIASLTKDRETFMFSATW 273
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKE+++LA D+L + I +++G +L
Sbjct: 274 PKEIRQLASDFLSNPIHMHVGGEEL 298
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F ++
Sbjct: 130 KTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKH 189
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
C++GG + Q L EIV
Sbjct: 190 VCIYGGEDRHRQINKLRFHPEIV 212
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ N I Q V + QEHEK K +L+E QS+ K IIF +TKR + +S ++
Sbjct: 299 ATNERIQQNVLLLQEHEKGEKCVEILKE-NQSK----KIIIFAKTKRTVQQLSDFLKSKS 353
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ +HGDKTQQER L +F
Sbjct: 354 IRCLSIHGDKTQQERVVALDKF 375
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 114 bits (274), Expect = 3e-24
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDF+E G + R +LVLDEAD+MLDMGFEPQIRKII I DRQT+M+SATW
Sbjct: 254 ATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATW 313
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKE+++LA D+L D + + IG+ L
Sbjct: 314 PKEIQQLAADFLVDPVHMIIGNKDL 338
Score = 99 bits (238), Expect = 6e-20
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F +R
Sbjct: 170 KTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQ 229
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC+FGGA + QA DL +V+
Sbjct: 230 TCLFGGAGRGPQANDLRHLPSLVV 253
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ N NI Q++ C+E EK +K +L E K IIF +TKR +++ N+ G
Sbjct: 339 TTNSNIKQVITKCEEFEKLSKCLEVLNE-----HKDDKIIIFTKTKRTTDDLQENLNMKG 393
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ A +HGDK Q +RD VL +F
Sbjct: 394 FQAYSLHGDKAQNQRDFVLGKF 415
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 112 bits (270), Expect = 8e-24
Identities = 52/81 (64%), Positives = 65/81 (80%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D LE + Q+ + LVLDEADRMLDMGFEPQIRKI+ +I P RQTLM++ATW
Sbjct: 563 ATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATW 622
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
PKEV+K+A D L + +Q+NIG
Sbjct: 623 PKEVRKIASDLLVNPVQVNIG 643
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG +S +
Sbjct: 480 KTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFGRSSRISC 538
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TC++GGAPK Q ++LERG +IV+
Sbjct: 539 TCLYGGAPKGPQLKELERGADIVV 562
Score = 69.7 bits (163), Expect = 7e-11
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = +1
Query: 493 RIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 672
R+ +AN I Q V++ + EKE +L +L+ SQE G+K IIF TKR ++++R+
Sbjct: 644 RVDELAANKAITQYVEVVPQMEKERRLEQILR----SQERGSKVIIFCSTKRLCDHLARS 699
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ R+ + AV +HGDKTQ ERD VL QF
Sbjct: 700 VGRH-FGAVVIHGDKTQGERDWVLNQF 725
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 111 bits (267), Expect = 2e-23
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP----DRQTLMW 421
+TPGRL+DF+EK +L+ C Y+VLDEADRMLDMGFEPQIRKIIE+ +RQTLM+
Sbjct: 317 ATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMF 376
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+PKE++KLA D+L +YI + +G
Sbjct: 377 SATFPKEIQKLAADFLYNYIFMTVG 401
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A+++P I H+ NQ + P L+LAPTRELA QI + F +
Sbjct: 229 QTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNT 288
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+R+ V+GGA Q R+++ G +++
Sbjct: 289 PLRSCVVYGGADTHSQIREVQMGCHLLV 316
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 568 KLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLY 747
KLN L + I + P +IFVETK+ A++++R + G+P +HGD++Q ER+ L
Sbjct: 422 KLNYL-KNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALS 480
Query: 748 QF 753
F
Sbjct: 481 MF 482
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 111 bits (266), Expect = 2e-23
Identities = 51/83 (61%), Positives = 66/83 (79%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D LE +L + +YLVLDEADRMLDMGFEPQIRKI+ ++ RQTLM++ATW
Sbjct: 289 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 348
Query: 434 PKEVKKLAEDYLGDYIQINIGSL 502
PKEV+K+A D L + Q+NIG++
Sbjct: 349 PKEVRKIAADLLVNPAQVNIGNV 371
Score = 86.2 bits (204), Expect = 8e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG +S +
Sbjct: 206 KTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKSSKISC 264
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C++GGAPK Q +++ERGV+IV+
Sbjct: 265 ACLYGGAPKGPQLKEIERGVDIVV 288
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN +I Q +++ EK ++L +L+ SQEPG+K IIF TKR + ++RN+ R +
Sbjct: 376 ANKSITQTIEVLAPMEKHSRLEQILR----SQEPGSKIIIFCSTKRMCDQLARNLTR-TF 430
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
A +HGDK+Q ERD+VL QF
Sbjct: 431 GAAAIHGDKSQAERDDVLNQF 451
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 110 bits (265), Expect = 3e-23
Identities = 51/84 (60%), Positives = 64/84 (76%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL D + ++ TYLVLDEADRMLDMGFEPQIRK++ IRPDRQT+M SATWP
Sbjct: 413 TPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWP 472
Query: 437 KEVKKLAEDYLGDYIQINIGSLQL 508
V++LA+ Y+ + IQ+ +GSL L
Sbjct: 473 PGVRRLAQSYMKNPIQVCVGSLDL 496
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR--RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTG+GKTLA++LP ++H Q R RG G LVLAPTRELA QI+ + +
Sbjct: 328 QTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG-M 385
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ CV+GG + Q DLERG EI+I
Sbjct: 386 KAVCVYGGGNRNMQISDLERGAEIII 411
Score = 39.5 bits (88), Expect = 0.087
Identities = 19/80 (23%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 SANHNILQIVDICQEH-EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 684
+A H++ QI+ + ++ +K N + ++ + + K IIF K +A+++S +
Sbjct: 497 AATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD----KIIIFCGRKVRADDLSSELTLD 552
Query: 685 GWPAVCMHGDKTQQERDEVL 744
G+ C+HG++ Q +R++ +
Sbjct: 553 GFMTQCIHGNRDQMDREQAI 572
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 110 bits (265), Expect = 3e-23
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D + ++ TYLVLDEADRMLDMGFEPQIRK++ IRPDRQT+M SATW
Sbjct: 453 ATPGRLNDLVAANVIDITSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATW 512
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P V++LA+ Y+ + +Q+ +G+L L
Sbjct: 513 PPGVRRLAQSYMSNPVQVYVGTLDL 537
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++ +
Sbjct: 368 QTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFRD- 425
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
++ C++GG +R Q ++ GVEI+I
Sbjct: 426 IKAICLYGGGDRRTQINKVKGGVEIII 452
Score = 41.5 bits (93), Expect = 0.022
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+A H + Q +++ E +K ++ + +G P K IIF K +A+++S G
Sbjct: 538 AATHTVTQQIEVIDEEDKYMRVMNFVTNMG----PSDKVIIFCGRKTRADDLSSEFVLSG 593
Query: 688 WPAVCMHGDKTQQERDEVL 744
+HGD+ Q +R++ L
Sbjct: 594 INCTSLHGDREQADREQAL 612
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 109 bits (263), Expect = 5e-23
Identities = 53/95 (55%), Positives = 67/95 (70%)
Frame = +2
Query: 218 SPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
S L EG+ +TPGRLID ++ TNL R TYLV DEADRM DMGFEPQ+R I +R
Sbjct: 223 SKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVR 282
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
PDRQTL++SAT+ K+V+ L D L D +++ IG L
Sbjct: 283 PDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGEL 317
Score = 93.5 bits (222), Expect = 5e-18
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 151 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 210
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG K EQ++ L+ G EIV+
Sbjct: 211 VAVFGGGNKYEQSKALQEGAEIVV 234
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN ++ QIV I + +K L Q + G+ +IFV K +E ++ N+R+ +
Sbjct: 320 ANEDVTQIVHIF--NSMPSKWEWLTQNLVSFASAGS-VLIFVTKKLNSEELATNLRKNDF 376
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
+HGD Q ER +VL QF
Sbjct: 377 EVALLHGDMDQFERSKVLGQF 397
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 107 bits (257), Expect = 3e-22
Identities = 48/83 (57%), Positives = 64/83 (77%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID L+ + R +YLVLDEADRM D+GFEPQ+R I+ QIRPDRQTL++SAT
Sbjct: 357 ATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATM 416
Query: 434 PKEVKKLAEDYLGDYIQINIGSL 502
P +V+KLA + L D I++ +G +
Sbjct: 417 PWKVEKLAREILSDPIRVTVGEV 439
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F +R
Sbjct: 273 KTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRV 332
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ V+GG K EQ ++L+ G EIV+
Sbjct: 333 SAVYGGMSKHEQFKELKAGCEIVV 356
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 107 bits (256), Expect = 4e-22
Identities = 46/81 (56%), Positives = 64/81 (79%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLI+ +++G NL + T L+LDEADRMLDMGFEPQ+R I+ IR DRQT++ SATW
Sbjct: 205 ATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATW 264
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
P EV++L++++ D I + IG
Sbjct: 265 PNEVQQLSKEFCYDPILVKIG 285
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-----QQVAADFGHT 167
QTGSGKTLAY+LPA+VH+ I P L+L PTREL QI Q + +G+
Sbjct: 104 QTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQLIEFYYGNK 163
Query: 168 SY-----------VRNTCVFGGAP-KREQARDLERGVEIVI 254
++ C++GG P K++Q +++G+ +++
Sbjct: 164 KQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHVIV 204
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/65 (33%), Positives = 43/65 (66%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
++ KL+VL+ + K +IF ETK++ E++S+++ + G+ + +HGDK+Q +RD
Sbjct: 299 QKEKLHVLMNVLDDLIYTD-KVLIFAETKKRCEDLSQSLTKQGYFCISLHGDKSQDQRDA 357
Query: 739 VLYQF 753
++ QF
Sbjct: 358 IMKQF 362
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 106 bits (254), Expect = 7e-22
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D NL+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQT+M SATW
Sbjct: 371 ATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATW 430
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLPQITT 523
P V +LA+ YL + + + +G+L L +++
Sbjct: 431 PHSVHRLAQSYLKEPMIVYVGTLDLVAVSS 460
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ + + +R
Sbjct: 287 QTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LR 345
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ CV+GG + EQ +L++GV+I+I
Sbjct: 346 SVCVYGGGNRDEQIEELKKGVDIII 370
Score = 37.5 bits (83), Expect = 0.35
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
++ Q + + E EK + + LQ + + K I+FV K A+++S ++
Sbjct: 460 SVKQNIIVTTEEEKWSHMQTFLQSMSSTD----KVIVFVSRKAVADHLSSDLILGNISVE 515
Query: 700 CMHGDKTQQERDEVLYQF 753
+HGD+ Q++R++ L F
Sbjct: 516 SLHGDREQRDREKALENF 533
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 106 bits (254), Expect = 7e-22
Identities = 52/92 (56%), Positives = 67/92 (72%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L EG+ TPGRLID ++K TNLQR +YLV DEADRM DMGFE Q+R I +RPDR
Sbjct: 373 LQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
QTL++SAT+ K+++KLA D L D I++ G +
Sbjct: 433 QTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG +R+
Sbjct: 298 KTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG EQA+ L+ G EIV+
Sbjct: 358 VAVYGGGSMWEQAKALQEGAEIVV 381
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN ++ QIV+I H +K N L + + + G+ ++FV K AE ++ N+++ G
Sbjct: 467 ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS-VLLFVTKKANAEELANNLKQEGH 523
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
+HGD Q ER++V+ F
Sbjct: 524 NLGLLHGDMDQSERNKVISDF 544
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 105 bits (253), Expect = 9e-22
Identities = 46/86 (53%), Positives = 66/86 (76%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR ID L++G T+L R +Y+VLDEADRMLDMGFEPQIR+I+ + QTL++SAT
Sbjct: 248 ATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATM 307
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLP 511
P E++ LA++YL + +Q+ +G + P
Sbjct: 308 PVEIEALAKEYLANPVQVKVGKVSSP 333
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVR 179
+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F + ++
Sbjct: 163 ETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLK 222
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
N V GG +Q +L GVEI +
Sbjct: 223 NCIVVGGTNIEKQRSELRAGVEIAV 247
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +1
Query: 505 TSANHNILQ-IVDICQEHEKENKLNVLLQEIGQSQEPGAK---TIIFVETKRKAENISRN 672
+S N+ Q +V + + + L++L++E Q+++ G + TI+FVE K + + ++
Sbjct: 331 SSPTTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEA 390
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ G AV +HG +Q ER+ L F
Sbjct: 391 LVAQGLSAVSLHGGHSQNEREAALQNF 417
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 105 bits (253), Expect = 9e-22
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+DFLE G NL +C Y+V+DEADR+LDMGFE Q+RKI+ Q+ ++Q L +ATW
Sbjct: 257 ATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATW 316
Query: 434 PKEVKKLAEDYLG-DYIQINIGSLQL 508
P++V+KLA D+ D ++I IG +L
Sbjct: 317 PEQVRKLAYDFCAYDPVKIQIGKNEL 342
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN NI Q V I + + KL L+E ++ K +IF +TKR +N+ + +R +
Sbjct: 343 TANKNIEQNVIISSSIDMKKKLLDWLKENYENN----KILIFCDTKRNCDNLGKELRYHQ 398
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ A+ +HGDK Q+ERD +L +
Sbjct: 399 YNALSIHGDKQQRERDRILNNY 420
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 78 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
R L+L PTREL Q+ F +++ V+GG PK Q +L++G +I++
Sbjct: 198 RASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIV 256
Score = 32.7 bits (71), Expect = 10.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI 56
+TGSGKTLA++LP +HI
Sbjct: 106 ETGSGKTLAFVLPCFMHI 123
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 105 bits (253), Expect = 9e-22
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+IDF+E G +L+ ++LV+DEADR+++MGFE QI I IRPDRQ L WSATWP
Sbjct: 269 TPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWP 328
Query: 437 KEVKKLAEDYLGDYIQINIGSLQL 508
K+V AE ++ I++ IGS QL
Sbjct: 329 KKVSSFAEKHIRTPIRLQIGSSQL 352
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A + +
Sbjct: 184 KTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEI 243
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GGAP+R Q L R +IV+
Sbjct: 244 ATIYGGAPRRSQQLQLSRRPKIVV 267
Score = 35.1 bits (77), Expect = 1.9
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQ--SQEPGAKTIIFVETKRKAENISRNIRR 681
+AN NI Q I +K++ L+ +G+ S + A+T+IF TK+ A+ + I+
Sbjct: 353 TANKNISQKFKIVPTDA--DKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQS 410
Query: 682 YG--WPAVCMHGDKTQQERDEVLYQF 753
G +HGD Q R+ ++ F
Sbjct: 411 NGDNVRIDTLHGDVDQNRRERIVQDF 436
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 105 bits (252), Expect = 1e-21
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +2
Query: 209 KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 388
++A G G+ +TPGRL DF+E+G L R T LVLDEADRMLD+GFEP+IR I
Sbjct: 142 QKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAG 201
Query: 389 QIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
R DRQT+M+SATWP+ V+ LA +++ + I++ IG+
Sbjct: 202 ATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGA 238
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G S VR
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGEASGVRCV 131
Query: 186 CVFGGAPKREQARDLERG 239
CV+GGAPK EQ ++ G
Sbjct: 132 CVYGGAPKYEQKAQMKAG 149
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKL-NVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
A+ +I QIV++ + +K+ L V+ Q +G+ +E +T+IF K++ N+ + + R
Sbjct: 243 ASQSITQIVEVVEPQDKDRHLARVMKQYLGKGKEV-PRTLIFGLYKKECANLHQRLSRE- 300
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
WPAVC+HGD +Q +R++ + F
Sbjct: 301 WPAVCIHGDMSQHDREKSVDAF 322
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 105 bits (251), Expect = 2e-21
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLIDFL+ TNL TYLVLDEADRMLDMGFE Q+RKI IR DRQT+ +SATW
Sbjct: 197 ATPGRLIDFLDAQVTNLHNVTYLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATW 256
Query: 434 PKEVKKLAEDYL-GDYIQINIGSLQL 508
PK V+ LA D + I + IGS ++
Sbjct: 257 PKTVQNLACDLCHNEPINLYIGSQEV 282
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F + +
Sbjct: 116 QTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSEAYNMNS 172
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C++GGA KR Q L R +IV+
Sbjct: 173 ACIYGGADKRPQEMALARDPDIVV 196
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/80 (36%), Positives = 49/80 (61%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N NI Q ++EK+ +L +L+E+ K +IFVETK+ E+++ + +G+
Sbjct: 285 NKNITQETICLYQNEKQEELLYILEELSNKD----KVLIFVETKKDCEDLASYLSEHGFF 340
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HGDKTQQ+RD V+ +F
Sbjct: 341 CMSLHGDKTQQQRDYVMKEF 360
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 105 bits (251), Expect = 2e-21
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ--IRPD--RQTLMW 421
+TPGRL+D +E+G L C YLVLDEADRMLDMGFEPQIR+I+EQ + P R T+M+
Sbjct: 322 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 381
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+PKE++ LA D+L +YI + +G
Sbjct: 382 SATFPKEIQMLARDFLDEYIFLAVG 406
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRELAQQIQQ 143
QTGSGKT A++LP + I + P RR PI+LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 144 VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
A F + S VR V+GGA +Q RDLERG +++
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 321
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +1
Query: 463 LLGRLHSDQYRIITT----SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTII 630
+L R D+Y + S + NI Q V +E +K + L LL G+ + T++
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKD----SLTLV 446
Query: 631 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
FVETK+ A+++ + G+ +HGD++Q++R+E L+QF
Sbjct: 447 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQF 487
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 103 bits (247), Expect = 5e-21
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL D L K +L YLVLDEADRMLDMGF PQI +I+QI +RQTLM+SATWP
Sbjct: 241 TPGRLNDLLRKH--HLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWP 298
Query: 437 KEVKKLAEDYLGDYIQINIGSLQL 508
KEVK LA +L D I+I +GS +L
Sbjct: 299 KEVKLLASKFLKDPIKITVGSQEL 322
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V + +R
Sbjct: 156 TGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQ 215
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GG K +Q+R L GV+IVI
Sbjct: 216 LCAYGGLGKIDQSRILRNGVDIVI 239
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 103 bits (246), Expect = 6e-21
Identities = 45/81 (55%), Positives = 64/81 (79%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL++ ++K TNL+RCTY+V+DEAD+M MGFE QIR I++QIRPDRQTL+++AT
Sbjct: 191 ATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFTATL 250
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
K+++ L D L + + I IG
Sbjct: 251 KKKIQNLVMDVLRNPVTIKIG 271
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + + +
Sbjct: 107 KTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISV 166
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG K EQ + L+ GVEI+I
Sbjct: 167 GALLGGENKHEQWKMLKAGVEILI 190
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 102 bits (244), Expect = 1e-20
Identities = 45/73 (61%), Positives = 59/73 (80%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+Y+LPA++ I+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++N
Sbjct: 43 KTGSGKTLSYLLPALMPIDEQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAIKIKN 102
Query: 183 TCVFGGAPKREQA 221
C+FGG+ KR +
Sbjct: 103 ICLFGGSAKRRSS 115
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 102 bits (244), Expect = 1e-20
Identities = 48/81 (59%), Positives = 63/81 (77%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLI+ ++K TNLQRCTY+VLDEAD+M +GFE QIR II QIRPD+Q L+++AT
Sbjct: 317 ATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRPDKQILLFTATM 376
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
K++++L D L D I I IG
Sbjct: 377 KKKIRQLCVDMLIDPIVITIG 397
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ + +
Sbjct: 233 KTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISV 292
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ + GG K Q ++L GV+I+I
Sbjct: 293 SALLGGENKHHQWKELRAGVDIII 316
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 101 bits (243), Expect = 1e-20
Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR--- 397
+ +G +TPGRL D LE+ L YLVLDEADRMLDMGFEPQIRKI+EQ
Sbjct: 338 ISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIVEQTNMPP 397
Query: 398 -PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
RQTLM+SAT+P+E++ LA D+L DY+ + +G +
Sbjct: 398 PGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKV 433
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQQVAADFG 161
QTGSGKT A+++P + + P + + P+AL+LAPTRELA QI A F
Sbjct: 256 QTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFS 315
Query: 162 HTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ S VR V+GG R Q +D+ +G +++
Sbjct: 316 YRSLVRPCVVYGGRDIRGQLQDISQGCNMLV 346
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI Q + E+EK + L +L +I + + ++FVETKR A+ + + G
Sbjct: 435 STSQNITQRIVYVDENEKRDHLLDILTDI----DSDSLILVFVETKRGADALEGFLHTEG 490
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+HGD++Q +R+ L F
Sbjct: 491 SCVASIHGDRSQSDRELALQSF 512
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 101 bits (243), Expect = 1e-20
Identities = 48/97 (49%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
L +G++ TPGR+ID L + TNLQR TYLVLDEADRM DMGFEPQ+ K+ ++R
Sbjct: 437 LKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVR 496
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
PDRQT+++SAT+P++++ LA+ L + ++I +G + +
Sbjct: 497 PDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISV 533
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F + +
Sbjct: 362 KTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISS 421
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C FGG+ Q +L++G +I++
Sbjct: 422 CCCFGGSSIESQIAELKKGAQIIV 445
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 729
E K +KL L + G ++ K +IFVE + A+ + + +P + +HG K Q +
Sbjct: 554 EEAKFSKLLSTLNDYGD-KDAECKILIFVEKQIAADELLVKLLTEKYPCLAIHGGKDQID 612
Query: 730 RDEVLYQF 753
R + +F
Sbjct: 613 RKHAIREF 620
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 101 bits (242), Expect = 2e-20
Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+DFL +G T L +YLV+DEADR+L++GFE IR+I++QIR DRQT+ +SATW
Sbjct: 229 ATPGRLLDFLREGATTLANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATW 288
Query: 434 PKEVKKLAED---YLGDYIQINIGSLQL 508
PK VK LA D Y Y+QI +L +
Sbjct: 289 PKAVKDLAFDFCQYSPIYVQIGKSNLTI 316
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVAADFGHT 167
QTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+ F
Sbjct: 139 QTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFTQN 198
Query: 168 SYVRNTCVFGGAPKRE-QARDLERGVEIVI 254
++ C++GG R+ Q +L R I++
Sbjct: 199 YRLKTLCIYGGINNRKNQFYNLGRFPNILV 228
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N NI Q + + +K KL +L + S K +IF E K++ E +S N+ G+
Sbjct: 317 NKNIDQEIICLFQKDKLQKLLDILDTLKISD----KVLIFSEQKQRCEQLSINMADKGYY 372
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HGDKTQ +RDE++ F
Sbjct: 373 TIALHGDKTQPQRDEIMKAF 392
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 101 bits (241), Expect = 3e-20
Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWS 424
+TPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+S
Sbjct: 279 ATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFS 338
Query: 425 ATWPKEVKKLAEDYLGD-YIQINIG 496
AT+PKE++ LA+D+L D YI + +G
Sbjct: 339 ATFPKEIQVLAKDFLKDNYIFLAVG 363
Score = 62.5 bits (145), Expect = 1e-08
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 152
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 153 DFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVI 254
F + S ++ ++GG R+Q L G I+I
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILI 278
Score = 37.1 bits (82), Expect = 0.46
Identities = 27/82 (32%), Positives = 40/82 (48%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI Q + E EK + L EI ++ ++FVETKR A ++ + R
Sbjct: 367 STSENIEQRLLWVNEMEKRSNL----MEILMNEHSENLVLVFVETKRGANELAYFLNRQQ 422
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+V +HGD Q ER+ L F
Sbjct: 423 IRSVSIHGDLKQIERERNLELF 444
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 101 bits (241), Expect = 3e-20
Identities = 48/85 (56%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQTLMW 421
+TPGRL D LE+G +LQ +L LDEADRMLDMGFEPQIRKI++Q+ P RQT+++
Sbjct: 280 ATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLF 339
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P+E+++LA D+L +YI + +G
Sbjct: 340 SATFPREIQRLASDFLSNYIFLAVG 364
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQVAADFGHT 167
QTGSGKT A+ P I I I R G P+A++L+PTRELA QI A F +
Sbjct: 191 QTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQ 250
Query: 168 SYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ V+ +GG P +Q R+LERGV+I++
Sbjct: 251 TGVKVVVAYGGTPVNQQIRELERGVDILV 279
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLL--QEIGQSQEPGAKTIIFVETKRKAENISRNIRR 681
S+ I+Q V+ + +K + L LL Q +Q A T++FVETK+ A+++ +
Sbjct: 368 SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCI 427
Query: 682 YGWPAVCMHGDKTQQERDEVLYQF 753
G+PA +HGD++QQER+ L F
Sbjct: 428 NGFPATTIHGDRSQQEREVALRSF 451
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 101 bits (241), Expect = 3e-20
Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L + TNL+R TYLV+DEADRM DMGFEPQI +I++ IRPDRQT+++SA
Sbjct: 526 TPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSA 585
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P++V+ LA L ++I +G
Sbjct: 586 TFPRQVETLARKVLNKPVEIQVG 608
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +
Sbjct: 441 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIIC 500
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ +Q +L+RG EIV+
Sbjct: 501 VPVYGGSGVAQQISELKRGTEIVV 524
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 101 bits (241), Expect = 3e-20
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL RCTYLVLDEADRM D+GFEPQ+ +II IRPDRQT+++SA
Sbjct: 548 TPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSA 607
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P+ ++ LA L ++I +G
Sbjct: 608 TFPRAMEALARKVLKKPVEITVG 630
Score = 93.1 bits (221), Expect = 7e-18
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F +R
Sbjct: 463 KTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRA 522
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GGAP ++Q DL+RG EIV+
Sbjct: 523 CCAYGGAPIKDQIADLKRGAEIVV 546
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
QIV++ E K ++L LL E+ +Q +T++FV+ + A+ + ++ + G+ + +H
Sbjct: 641 QIVEVRPEESKFSRLLELLGELYNNQLD-VRTLVFVDRQESADALLSDLMKRGYTSNSIH 699
Query: 709 GDKTQQERDEVLYQF 753
G K Q +RD + +
Sbjct: 700 GGKDQHDRDSTISDY 714
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 101 bits (241), Expect = 3e-20
Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMW 421
+TPGRL D + +G L+ +LVLDEADRMLDMGFEPQIR+I+EQ+ RQTLM+
Sbjct: 434 ATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMF 493
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+PK++++LA D+L +YI + +G
Sbjct: 494 SATFPKQIQELASDFLSNYIFLAVG 518
Score = 66.9 bits (156), Expect = 5e-10
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQQIQQVAA 152
QTGSGKT A+++P + + + PP RR P+ LVLAPTRELA QI + A
Sbjct: 340 QTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAK 399
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
F + S +R ++GG EQ R+L+RG +++
Sbjct: 400 KFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIV 433
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEI--GQSQEPGAKTIIFVETKRKAENISRNIRR 681
S + NI Q + E +K + L LL I G + T+IFVETK+ A+++ + +
Sbjct: 522 STSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQ 581
Query: 682 YGWPAVCMHGDKTQQERDEVLYQF 753
P +HGD+TQ+ER+E L F
Sbjct: 582 CNHPVTSIHGDRTQKEREEALRCF 605
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 100 bits (240), Expect = 3e-20
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
L G+ TPGR+ID L G+ TNL+R TY+VLDEADRM DMGFEPQI +I+ +R
Sbjct: 237 LKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRILANLR 296
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
PDRQT+M+SAT+P ++ LA L + I+I IG
Sbjct: 297 PDRQTVMFSATFPHTMEALARAALDNPIEIQIG 329
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 162 KTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFSA 221
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
V+GG+ Q DL+RG EIV
Sbjct: 222 VSVYGGSGIAAQIGDLKRGAEIV 244
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 100 bits (239), Expect = 4e-20
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D NL+ TYLVLDEAD+MLD+GFE QI KI+ +RPDRQT+M SATW
Sbjct: 434 ATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILLDVRPDRQTVMTSATW 493
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLPQITT 523
P +++LA YL + + + +G+L L + T
Sbjct: 494 PHTIRQLARSYLKEPMIVYVGTLDLVAVHT 523
Score = 79.8 bits (188), Expect = 7e-14
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++ + + + ++
Sbjct: 350 QTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LK 408
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ CV+GG ++EQ + + +GV+I+I
Sbjct: 409 SVCVYGGGNRKEQIQHITKGVDIII 433
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
A H + Q + + E EK L+QE ++ P K IIFV K A+++S ++ G
Sbjct: 520 AVHTVKQDIIVTTEEEKRT----LIQEFLRNLAPEDKAIIFVSRKLVADDLSSDLSIQGV 575
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
P +HG++ Q +R++ L F
Sbjct: 576 PVQSLHGNREQFDREQALDDF 596
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 99 bits (238), Expect = 6e-20
Identities = 46/94 (48%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI---- 394
L +G+ TPGRL+DF+ KG NL + YL+LDEADRMLDMGFEP+IRK++
Sbjct: 396 LEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTFDMPE 455
Query: 395 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
+ RQTLM+SAT+ E+++LA+++L +Y+ + +G
Sbjct: 456 KGQRQTLMFSATFAAEIQQLAKEFLSEYVFVTVG 489
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQVAADFGH 164
QTGSGKT A++LP + I I G G P A+++ PTREL QI A F
Sbjct: 315 QTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYLEARKFAS 374
Query: 165 TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
++ VR V+GG QAR+LE+G +V+
Sbjct: 375 STCVRPVVVYGGTSVGYQARELEKGAHVVV 404
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN +I Q V ++EK KL +L + G +T++F+ETKR A+ ++ + + +
Sbjct: 494 ANSDITQEVHQVTKYEKREKLVEILNQAGTD-----RTLVFLETKRSADFLAAYLSQEQY 548
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
PA +HGD+ Q+ER+E L F
Sbjct: 549 PATSIHGDRLQREREEALLDF 569
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 99 bits (238), Expect = 6e-20
Identities = 44/86 (51%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D LE G +L RC Y+V+DEADR+LDMGFE Q++KI+ Q+ ++Q L ++ATW
Sbjct: 457 ATPGRLLDLLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATW 516
Query: 434 PKEVKKLAEDYLG-DYIQINIGSLQL 508
P++V+KLA + D ++I IG +L
Sbjct: 517 PEQVRKLAYQFSSFDPVKIQIGKSEL 542
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN NI Q V I + + KL L + Q+ E G K +IF +TKR +++ + +R +
Sbjct: 543 TANKNIQQSVVISSSIDLKKKL---LDWLKQNYE-GNKILIFCDTKRNCDSLCKELRYHQ 598
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ A+ +HGDK Q+ERD +L +
Sbjct: 599 YNALAIHGDKEQRERDRILSNY 620
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 99 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
L+L PTREL Q+ F ++R+ V+GG PK Q +L++G +IV+
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVV 456
Score = 36.3 bits (80), Expect = 0.81
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
+TGSGKTLA+ LPA++HI Q R G + L RE +++Q D G S
Sbjct: 322 ETGSGKTLAFALPALMHILKQREGERKSGRES-GLENARE--HRLEQNQEDMGEEPSQEW 378
Query: 180 NTCVFGGAPKREQARD---LERGVEIVILL 260
N GA +R D ER V +ILL
Sbjct: 379 NNEPTQGATQRSSGNDTHEAERTVYGLILL 408
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 99.5 bits (237), Expect = 8e-20
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP 400
+G+G +TPGRL+ F EK +L YL+ DEADRMLDMGFEPQIR+I E ++ P
Sbjct: 259 MGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREICEDNEMPP 318
Query: 401 --DRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQTLM+SAT+PK++++LA D+L DY+ I +G
Sbjct: 319 VGKRQTLMFSATFPKQIQRLAADFLDDYVFITVG 352
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQIQQVAADF 158
QTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI + A F
Sbjct: 176 QTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRF 235
Query: 159 GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ +R+ CV+GG+ Q +++ +G +I++
Sbjct: 236 TEDTPIRSVCVYGGSDSYTQIQEMGKGCDILV 267
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 484 DQYRIITTS-ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAEN 660
D Y IT A + I I E+E K +L +G+ G KT+IFVETKR A+
Sbjct: 344 DDYVFITVGRAGSTVESIQQIILWVEEEIKQEAILDVLGEFAGKGQKTVIFVETKRGADI 403
Query: 661 ISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ + +G+ +HGD++Q +RD L +F
Sbjct: 404 LENYLYDHGYKVDSIHGDRSQADRDFSLKRF 434
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 99.1 bits (236), Expect = 1e-19
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
L G+ TPGR+ID L G TNL+R TY+VLDEADRM DMGFEPQI +I+ +R
Sbjct: 450 LKRGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLR 509
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
PDRQT+M+SAT+P ++ LA L + ++I IG
Sbjct: 510 PDRQTVMFSATFPHTMEALARAALENPVEIQIG 542
Score = 86.2 bits (204), Expect = 8e-16
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 375 KTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNA 434
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
V+GG+ Q +L+RG EIV
Sbjct: 435 VSVYGGSGIAAQIGELKRGAEIV 457
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N +I Q+V+I E E++ +L+ +G+ E G K IIFV ++ KA++ + + + G+P
Sbjct: 548 NSDIDQVVEIRPE---EDRFLRVLELLGEWCERG-KIIIFVASQDKADSTFKELLKSGYP 603
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HG K Q +R + F
Sbjct: 604 CLSLHGSKEQSDRHSTISDF 623
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 99.1 bits (236), Expect = 1e-19
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L + TNL+R TY+VLDEADRM DMGFEPQ+ +II+ +RPDRQT+M+SA
Sbjct: 640 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 699
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P++++ LA L I++ +G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVG 722
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F + +R
Sbjct: 555 KTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRP 614
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GG EQ +L+RG EI++
Sbjct: 615 VCVYGGTGISEQIAELKRGAEIIV 638
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LL+ +G QE G+ I+FV+ + A+ + R++ + +P + +HG Q +RD + F
Sbjct: 747 LLELLGIYQEAGS-IIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDF 803
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGRLID L + TNL R TYLVLDEADRM DMGFEPQ+ KI+ IRPDRQT+++S
Sbjct: 605 ATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFS 664
Query: 425 ATWPKEVKKLAEDYLGDY-IQINIG 496
AT+PK+++ LA L + ++I +G
Sbjct: 665 ATFPKQMESLARKVLKNKPLEITVG 689
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F +R
Sbjct: 521 KTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRA 580
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GGAP EQ ++++ +IV+
Sbjct: 581 ACVYGGAPISEQIAEMKKTADIVV 604
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/77 (33%), Positives = 49/77 (63%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I QIV++ E K ++L +L E+ ++E A+T+IFV+ + A+++ +++ R G+ +
Sbjct: 698 IEQIVEVRSEDTKFHRLLEILGEL-YNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMS 756
Query: 703 MHGDKTQQERDEVLYQF 753
+HG K Q +RDE + F
Sbjct: 757 LHGGKDQVDRDETISDF 773
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 98.7 bits (235), Expect = 1e-19
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Frame = +2
Query: 149 CRFWTHILCS*HVC-VWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGT---TNLQRCT 316
CR++T IL VC V L G+ TPGR+ID L TNL+R T
Sbjct: 597 CRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVT 656
Query: 317 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
Y+V+DEADRM D+GFEPQI KII+ IRPDRQ +M+SAT+PK V++LA+ L I+ +G
Sbjct: 657 YVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAKRVLRKPIECIVG 716
Score = 86.6 bits (205), Expect = 6e-16
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI F +
Sbjct: 549 ETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFTSILNLNV 608
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C GGA Q DL+RG EIV+
Sbjct: 609 VCCVGGAGIAGQLSDLKRGTEIVV 632
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
A NI QI++ E +K KL +L QE +IFVE + +A+++ + + +YG+
Sbjct: 721 AGGNIEQIIEFMDESDKLYKLLLLFQEWYTK----GSILIFVEKQTEADDLFKELLKYGY 776
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
+ +HG Q+R+ ++ F
Sbjct: 777 KSFVLHGGMDPQDREFTIHDF 797
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/85 (56%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMW 421
+TPGRL D LE+G +L YLVLDEADRMLDMGFEPQIR I+E+ +RQTLM+
Sbjct: 293 ATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMF 352
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P +++ LA D+L +YI +++G
Sbjct: 353 SATFPVDIQHLARDFLDNYIFLSVG 377
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQQIQQVAA 152
QTGSGKT ++ P + P R P ALVLAPTRELA QI + A
Sbjct: 199 QTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEAR 258
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
F + S+VR V+GGAP Q R+++RG ++++
Sbjct: 259 KFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLV 292
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI Q + + +K++ L LL S E T+IFVETKR A+ ++ +
Sbjct: 381 STSENITQRILYVDDMDKKSALLDLL-----SAEHKGLTLIFVETKRMADQLTDFLIMQN 435
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ A +HGD+TQ ER+ L F
Sbjct: 436 FKATAIHGDRTQAERERALSAF 457
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/90 (51%), Positives = 64/90 (71%)
Frame = +2
Query: 233 EGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 412
EG+ TPGR+ID ++ G TN R T+LV DEADRM DMGFE Q++ I + +RPDRQ
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 413 LMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
LM+SAT+ ++V++LA D L D ++I G +
Sbjct: 448 LMFSATFKQKVERLARDALVDPVRIVQGEV 477
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 183 TCVFGGAPKREQARDLE-RGVEIVI 254
C +GG K EQ+ +L+ G E+V+
Sbjct: 370 ICAYGGGSKWEQSNELQNEGAEMVV 394
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN +I Q V + Q + KL+ L++ + + G K +IFV K +E++++ ++ +
Sbjct: 480 ANADIEQKVFVMQNQDV--KLHWLIRNLVEFASLG-KVLIFVTKKLDSEDVAKKLKMKDF 536
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
V +HGD Q ER+E L +F
Sbjct: 537 DIVLLHGDMLQAERNENLLKF 557
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L + TNL+R T+LV+DEADRM DMGFEPQI +II+ IRP+RQT+++SA
Sbjct: 659 TPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSA 718
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P++V+ LA L ++I +G
Sbjct: 719 TFPRQVETLARKVLNKPVEIQVG 741
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +R
Sbjct: 574 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRC 633
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ +Q +L+RG EIV+
Sbjct: 634 VPVYGGSGVAQQISELKRGTEIVV 657
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/80 (27%), Positives = 48/80 (60%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N +I Q+V++ E ++ +L L+ +G+ E G K ++FV+++ K + + R++ + +P
Sbjct: 747 NKDITQLVEVRPESDRFLRL---LELLGEWSEKG-KILVFVQSQEKCDALYRDMIKSSYP 802
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HG K Q +R+ + F
Sbjct: 803 CLSLHGGKDQTDRESTISDF 822
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 98.3 bits (234), Expect = 2e-19
Identities = 47/88 (53%), Positives = 68/88 (77%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGRLID L T L+R T++VLDEADRM DMGFEPQI+KI QIRPD+QT+++S
Sbjct: 517 ATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFS 576
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSLQL 508
AT+P+++++LA+ L + I+I +G + +
Sbjct: 577 ATFPRKLEQLAKKVLHNPIEIIVGGVSV 604
Score = 83.0 bits (196), Expect = 7e-15
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F T ++
Sbjct: 433 KTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKV 492
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GG+ Q +L+RGV +++
Sbjct: 493 CCCYGGSNIENQISELKRGVNVIV 516
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 496 IITTSANHNILQIVDICQ-EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 672
++ + + I+ D Q + K KL +L + K ++FVE + A+ +
Sbjct: 604 VVASEISQEIILFEDTDQLMNHKIQKLEDILSRFFDLGKNTGKVLVFVEKQTDADKLVSV 663
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ + P + +HG K Q +R + +F
Sbjct: 664 LLKKAIPCIAIHGGKDQIDRKHAIREF 690
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/85 (55%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 STPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
+TPGRL+D L K +TNL+R TYL LDEADRMLDMGFE +R I + +RPDRQ +M+SAT
Sbjct: 186 ATPGRLVDVLCMKNSTNLRRVTYLALDEADRMLDMGFEKIVRSICQAVRPDRQCVMFSAT 245
Query: 431 WPKEVKKLAEDYLG-DYIQINIGSL 502
P +++LA D L D + ++IG++
Sbjct: 246 MPAAMQRLARDVLARDAVTVSIGNV 270
Score = 86.2 bits (204), Expect = 8e-16
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYV 176
+TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F S
Sbjct: 100 KTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSGA 159
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R +FGG KR+Q + L G EIV+
Sbjct: 160 RCCAIFGGVSKRDQFKKLRAGAEIVV 185
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
AN ++ Q+V + ++ + + L + +G + + G + I+FV K E + + G
Sbjct: 273 ANEDVRQVVYVFEDDAR--RAAWLFENLGDAVDEG-QAIVFVNHKSSVEELVNELATRGI 329
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
AV +HGD Q +R + F
Sbjct: 330 KAVALHGDLDQAQRQFAMKAF 350
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 5/86 (5%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMW 421
+TPGRL+D +E+G L+ C YLVLDEADRMLDMGFEPQIR+++E R +R T M+
Sbjct: 300 ATPGRLLDVMEQGLIGLEGCRYLVLDEADRMLDMGFEPQIRQVVEFNRMPPKEERVTAMF 359
Query: 422 SATWPKEVKKLAEDYL-GDYIQINIG 496
SAT+PKE++ LA+D+L +Y+ + +G
Sbjct: 360 SATFPKEIQLLAQDFLKQNYVFLAVG 385
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI+Q + +E EK + L LL G S + T++FVETKR A +++ + R
Sbjct: 389 STSENIMQKIVWVEEDEKRSYLMDLLDATGDS----SLTLVFVETKRGASDLAYYLNRQN 444
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ V +HGD Q ER++ L F
Sbjct: 445 YQVVTIHGDLKQFEREKHLDLF 466
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 96.3 bits (229), Expect = 7e-19
Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMW 421
+TPGRL D + +G L +LVLDEADRMLDMGFEPQIR+I+E+ R +RQTLM+
Sbjct: 439 ATPGRLEDMIGRGKVGLDNIRFLVLDEADRMLDMGFEPQIRRIVEESRMPVTGERQTLMF 498
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+PK +++LA D+L YI + +G
Sbjct: 499 SATFPKAIQELASDFLYRYIFLAVG 523
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEI---GQSQEPGAKTIIFVETKRKAENISRNIR 678
S + NI Q + +E+ K + L LL I + T+IFVETK+ A+++ +
Sbjct: 527 STSVNITQTIFWVEENIKRSHLLDLLSNITKQNDGDDENCLTLIFVETKKAADSLEEFLY 586
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
+ +P +HGD+TQ ER+E L F
Sbjct: 587 NHNFPVTSIHGDRTQAEREEALRLF 611
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 96.3 bits (229), Expect = 7e-19
Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 5/95 (5%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR--- 397
L GS +TPGRL D +++G NL+ +L+LDEADRMLDMGF PQIR+I+E
Sbjct: 331 LDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGFAPQIREIVEDSEMPH 390
Query: 398 --PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQT+M+SAT+P+E+++LA+D+L +YI + +G
Sbjct: 391 SLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVG 425
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQQIQQVAA 152
QTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA Q + +
Sbjct: 246 QTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESR 305
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
F + +R ++GG+ R Q DL+RG +I++
Sbjct: 306 KFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIV 339
Score = 50.4 bits (115), Expect = 5e-05
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I+Q V +E K L LL E G+ T++FVE KR+A+ I + +PAV
Sbjct: 433 SIVQRVVYAEEDHKPRLLVKLLLEQGEGL-----TVVFVEMKRRADQIEDFLIDQNFPAV 487
Query: 700 CMHGDKTQQERDEVLYQF 753
+HGD++QQER+ L F
Sbjct: 488 SIHGDRSQQEREHALRLF 505
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 96.3 bits (229), Expect = 7e-19
Identities = 48/85 (56%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQTLMW 421
+TPGRL D + +G L+ +LVLDEADRMLDMGFEPQIR IIE + P RQTLM+
Sbjct: 406 ATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMF 465
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+PK +++LA D+L +YI + +G
Sbjct: 466 SATFPKNIQELASDFLSNYIFLAVG 490
Score = 69.3 bits (162), Expect = 9e-11
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 152
QTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA QI + A
Sbjct: 312 QTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAK 371
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
F + S +R ++GG EQ R+L+RG +++
Sbjct: 372 KFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIV 405
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQ---EPGAKTIIFVETKRKAENISRNIR 678
S + NI Q + E+EK + L LL + + P + T+IFVETK+ A+ + +
Sbjct: 494 STSENITQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFLY 553
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
+ P +HGD++Q+ER++ L F
Sbjct: 554 QNKHPVTSIHGDRSQREREDALKCF 578
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 96.3 bits (229), Expect = 7e-19
Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 439
PGRL DFL++G +L + TYLV+DEADR+LDMGFE +R I+++ R DRQT+ +SATWPK
Sbjct: 235 PGRLKDFLQEGILDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPK 294
Query: 440 EVKKLAEDYLG-DYIQINIGSLQL 508
V+ L+ D+ D I + +G L
Sbjct: 295 AVRNLSLDFCAEDPIYVQVGRSNL 318
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
+TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI Q + F +
Sbjct: 145 ETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVSLFMKPN 204
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+ +GG + +QA+ ++R +I++
Sbjct: 205 NLTVATAYGGQNRDQQAQQIKRNPDILV 232
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ N NI Q + IC + + KL LL + Q + K +IF ET+ E +S ++ + G
Sbjct: 319 TVNKNIDQEI-ICLYNNQ--KLQTLLDILDQLKI-NDKVLIFAETRISCEQLSVDMTQEG 374
Query: 688 WPAVCMHGDKTQQERDEVL 744
+ AV +HG+KTQ +RD ++
Sbjct: 375 YYAVALHGNKTQGQRDSIM 393
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 95.9 bits (228), Expect = 9e-19
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +2
Query: 236 GSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 415
GS +TPGR ID L N+++ +YLV+DEADRM D+GFEPQ+ +I E++R DRQTL
Sbjct: 223 GSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTL 282
Query: 416 MWSATWPKEVKKLAEDYLGDYIQINIG 496
M+SAT+P V+++A L + I+I +G
Sbjct: 283 MFSATFPHTVERIARKLLQNSIEIVVG 309
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q ++
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQTHIECQKIFSLMDKKSA 205
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
C+ GG Q R ++ G ++I
Sbjct: 206 CLVGGNDIENQLRAIKNGSNVII 228
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L + TNL+R TYLVLDEADRM D GFEPQI K++ IRPD+QT+++SA
Sbjct: 434 TPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSA 493
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P+ ++ LA L ++I +G
Sbjct: 494 TFPRHMEALARKVLDKPVEILVG 516
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GG EQ DL+RG EIV+
Sbjct: 409 ACTYGGVGISEQIADLKRGAEIVV 432
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I Q IC EH+K KL L+ +G E G+ +I+FV+ + KA++I + R G+ +V
Sbjct: 524 DITQNAVICAEHQKFLKL---LELLGMYYEEGS-SIVFVDKQEKADDIVDQLMRTGYNSV 579
Query: 700 C-MHGDKTQQERDEVLYQF 753
+HG Q +RD + F
Sbjct: 580 APLHGGIDQHDRDSSIADF 598
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/83 (53%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII-EQIRPDRQTLMWSAT 430
+TPGRL+D L++G+ +L + YLVLDEADRML+ GFE I+ II E RQTLM++AT
Sbjct: 237 ATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTAT 296
Query: 431 WPKEVKKLAEDYLGDYIQINIGS 499
WPKEV++LA ++ + I+++IG+
Sbjct: 297 WPKEVRELASTFMNNPIKVSIGN 319
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN I QIV++ KE KL LL++ + K +IF K++A + RN++ G
Sbjct: 324 TANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNG 383
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ +HGD +QQ+R + L +F
Sbjct: 384 YNVAAIHGDLSQQQRTQALNEF 405
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+ +PAI H+ N R G LV++PTRELA QI ++
Sbjct: 157 ETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLTDKVGMQC 213
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
CV+GG PK EQ L++ +V
Sbjct: 214 CCVYGGVPKDEQRIQLKKSQVVV 236
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D G +L TY+VLDEADRMLDMGFE IR+I+ +IRPDR + SATW
Sbjct: 218 ATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATW 277
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL---PQITTFFK 532
P+ V+KL + Y + + GSL L +T FF+
Sbjct: 278 PEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFE 313
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGH 164
QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + +
Sbjct: 129 QTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSY 188
Query: 165 TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
Y ++ C++GG + EQ GVEIVI
Sbjct: 189 NGY-KSVCLYGGGSRPEQVEACRGGVEIVI 217
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/86 (48%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWS 424
TPGRLIDF+ +G N C +LVLDEADRMLDMGF +++K++ ++ +R TLM+S
Sbjct: 438 TPGRLIDFMNRGVFNFSACKFLVLDEADRMLDMGFMGEVKKVVYHGTMPVKVERNTLMFS 497
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSL 502
AT+P EV++LA ++L +YI + +G++
Sbjct: 498 ATFPNEVQELAAEFLENYIFVTVGTV 523
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT AY++P I + + P A+V+ PTRELA QI + A F + +
Sbjct: 349 QTGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDT 408
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
++ V+GG R Q+ ++ G I++
Sbjct: 409 IIKPVVVYGGVAPRYQSDKVKSGCNILV 436
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/68 (29%), Positives = 43/68 (63%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 729
E + +++++ LL+ + +++ G KT++F +K+ A+ ++ + PA +HGD+ Q +
Sbjct: 536 EIDAKSRIDRLLEIL--TEKEGVKTLVFASSKKTADFLAALLSTKNLPATSIHGDRFQYQ 593
Query: 730 RDEVLYQF 753
R+EVL F
Sbjct: 594 REEVLRDF 601
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+I+ L + TNLQR TY+VLDEADRM DMGFEPQ+ K+ IRP+RQT+++SA
Sbjct: 684 TPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSA 743
Query: 428 TWPKEVKKLAEDYLGDYIQINIG--SLQLPQIT 520
T P+ + LA+ L ++I +G S+ P+IT
Sbjct: 744 TMPRIMDALAKKTLQSPVEIVVGGRSVVAPEIT 776
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F +R
Sbjct: 599 KTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRA 658
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GGA ++Q DL+RG EI++
Sbjct: 659 VCAYGGAIIKDQIADLKRGAEIIV 682
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/77 (37%), Positives = 51/77 (66%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I QIV++ +E EK ++L LL E+ + E A+T+IFV+ + KA+++ +++ R G+P +
Sbjct: 775 ITQIVEVREEKEKFHRLLELLGELYNTDED-ARTLIFVDRQEKADDLLKDLMRKGYPCMS 833
Query: 703 MHGDKTQQERDEVLYQF 753
+HG K Q +RD + F
Sbjct: 834 IHGGKDQVDRDSTIDDF 850
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/105 (42%), Positives = 64/105 (60%)
Frame = +2
Query: 182 HVCVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 361
++C+ S K S + G +TPGRL+D L+K L C YLVLDEADRM+DMGF
Sbjct: 161 NLCIGGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGF 220
Query: 362 EPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
E +R I + RQTL++SAT PK+++ A+ L + +N+G
Sbjct: 221 EEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVG 265
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF------ 158
TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V F
Sbjct: 93 TGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRALEA 152
Query: 159 -GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
G S N C+ GG+ +EQ+ ++RGV +V+
Sbjct: 153 HGFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVV 184
Score = 39.5 bits (88), Expect = 0.087
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 535 VDICQEHE---KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCM 705
+D+ QE E +E K+ LL+ + ++ P +IF E K ++I + G AV +
Sbjct: 272 LDVIQEVEYVKQEAKVVYLLECLQKTPPP---VLIFAEKKSDVDDIHEYLLLKGVEAVAI 328
Query: 706 HGDKTQQERDEVLYQF 753
HGDK+Q+ER + +F
Sbjct: 329 HGDKSQEERVHAIREF 344
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F +R
Sbjct: 642 KTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRA 701
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GGAP REQ +L+RG EI++
Sbjct: 702 VCAYGGAPIREQIAELKRGAEIIV 725
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL+R TY+VLDEADRM DMGFEPQ+ KI +RPDRQT+++SA
Sbjct: 727 TPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSA 786
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T P+ + L + L + I++ +G
Sbjct: 787 TMPRIIDSLTKKVLKNPIEVTVG 809
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I QIV++ E K +++ LL E+ E A+T+IFVE + KA+++ + + G+P +
Sbjct: 818 IEQIVEVRDEPSKFHRVLELLGELYDRDED-ARTLIFVERQEKADDLLKELMMKGYPCMS 876
Query: 703 MHGDKTQQERDEVLYQF 753
+HG K Q +RD + F
Sbjct: 877 IHGGKDQIDRDSTISDF 893
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 93.9 bits (223), Expect = 4e-18
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFL--EKG-TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
L G+ TPGRLID L KG TNL+R T+LVLDEADRM DMGF PQI I+ IR
Sbjct: 488 LKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIR 547
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
PDRQT ++SAT+P ++ LA+ L +QI +G
Sbjct: 548 PDRQTALFSATFPIMIENLAKKILAKPLQIVVG 580
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F ++
Sbjct: 413 ETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKT 472
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GGA EQ L+RG EIVI
Sbjct: 473 LAIYGGAGIGEQLNALKRGAEIVI 496
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
+E KL LL+ +G+ E G IIFV T+ ++E++ ++ YG+ A +HG Q +R+
Sbjct: 598 EEKKLLKLLKLLGEWHEHG-NIIIFVNTQLESEHLFNDLLAYGYDAGILHGGVDQTDREF 656
Query: 739 VLYQF 753
L F
Sbjct: 657 TLNDF 661
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 93.5 bits (222), Expect = 5e-18
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFL---EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L + TNL+R T+LVLDEADRM DMGF PQI I++ IRPDRQT+M+SA
Sbjct: 639 TPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSA 698
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P +V+ +A+ L ++I G
Sbjct: 699 TFPPKVENVAKKILNKPLEIIAG 721
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F +R
Sbjct: 554 RTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRT 613
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GGA EQ +L+RG +IV+
Sbjct: 614 ACVYGGASISEQIAELKRGADIVV 637
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 93.1 bits (221), Expect = 7e-18
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
STPGRL+DF++ G L T +VLDEADRMLDMGFE QI +I+ +R DRQTL +SATW
Sbjct: 562 STPGRLLDFMKDGLP-LNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATW 620
Query: 434 PKEVKKLAEDYLG-DYIQINIG 496
P EV++LA D I I +G
Sbjct: 621 PNEVQRLANSLCNQDPIMIQLG 642
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/76 (50%), Positives = 46/76 (60%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ + + R
Sbjct: 477 ETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----QYELFTRT 528
Query: 183 TCVFGGAPKREQARDL 230
CV+GG K Q ++
Sbjct: 529 CCVYGGVFKNLQYSEI 544
Score = 38.7 bits (86), Expect = 0.15
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S N NI Q V I E++ E K L + G K +IF + K + + + +G
Sbjct: 647 SVNKNIQQEVIIVYENKFE-KFAELTDRL-----KGQKLLIFCQKKLDTQKLEYRLSIHG 700
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
A +HGD Q ERD+++ +F
Sbjct: 701 LKARYLHGDLKQAERDQIMVEF 722
>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/89 (48%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
STPGRLI+ +E G +L T LVLDEAD+ML G PQ+++I QIRPD Q +++SAT+
Sbjct: 348 STPGRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATF 407
Query: 434 PKEVKKLAEDYLGD-YIQINIGSLQLPQI 517
P +K++++D++ D I++ IGS +LP++
Sbjct: 408 PDSLKEVSKDWIKDPSIRLRIGSSELPKL 436
Score = 41.5 bits (93), Expect = 0.022
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Frame = +3
Query: 9 GSGKTLAYILPAIVH------------INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 152
GSGKTL Y+ P I H I + ++ G + LVL PTREL Q+
Sbjct: 253 GSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLVPTRELGLQVHSNTL 312
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLER 236
++ + ++GG K Q LE+
Sbjct: 313 IITQLFGIKTSVIYGGISKNLQIEQLEK 340
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Frame = +2
Query: 188 CVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 358
CV S + +G+ TPGR+ID L TN++R TY+V+DEADRM DMG
Sbjct: 510 CVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMG 569
Query: 359 FEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG--SLQLPQI 517
FEPQ+ KII +RP Q +++SAT+PK ++ LA L ++I +G S+ P+I
Sbjct: 570 FEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEI 624
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F +R
Sbjct: 448 KTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRA 507
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+C GG+ E +++G E+VI
Sbjct: 508 SCCVGGSSISEDIAAMKKGAEVVI 531
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQ--EPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
Q V++ K +L +L E+G+ E +T+IFV+ + A+++ R + + G+
Sbjct: 626 QRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCAS 685
Query: 703 MHGDKTQQERDEVLYQF 753
+HG K Q +RDE + F
Sbjct: 686 LHGGKEQVDRDEAIKNF 702
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL+R T++VLDEADRM DMGF PQI++IIE IRPD+Q +M+SA
Sbjct: 270 TPGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSA 329
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P V++ A ++L I+I G
Sbjct: 330 TFPISVEQHAREFLKKPIEIICG 352
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R+
Sbjct: 185 KTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIRS 244
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG Q L+RG EIV+
Sbjct: 245 VAVFGGTGISNQIGALKRGTEIVV 268
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/83 (22%), Positives = 41/83 (49%)
Frame = +1
Query: 505 TSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 684
+ ++ I QIV++ E + K+ L+ + + G + IIF ET++ + + +N+
Sbjct: 355 SQVSNTIEQIVEVI---ETKKKIERLISIVLEQNNKGGRIIIFTETQKNCDELYQNLMER 411
Query: 685 GWPAVCMHGDKTQQERDEVLYQF 753
+ +HG Q +R + +F
Sbjct: 412 NINCLLLHGGIDQIDRQNTIQEF 434
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 91.1 bits (216), Expect = 3e-17
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Frame = +2
Query: 254 STPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+T GRLID L+ + + +R TY+VLDEADRM DMGFEPQ+ KI+ IRPDRQT+++S
Sbjct: 639 ATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQTILFS 698
Query: 425 ATWPKEVKKLAEDYLGDYIQINIG--SLQLPQIT 520
AT+PK + LA L ++ IG S P+IT
Sbjct: 699 ATFPKTMAALARKALDKPAEVIIGGRSKVAPEIT 732
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+ QI F + S +
Sbjct: 554 KTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITI 613
Query: 183 TCVFGGAPKREQARDLERG 239
C +GG P +Q ++RG
Sbjct: 614 KCAYGGQPISDQIAMIKRG 632
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 90.6 bits (215), Expect = 4e-17
Identities = 40/80 (50%), Positives = 59/80 (73%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D +++ L +LVLDEAD+MLD+GF P +++II ++ DRQTL++SAT
Sbjct: 232 ATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATM 291
Query: 434 PKEVKKLAEDYLGDYIQINI 493
KE+KKL E YL D +Q+++
Sbjct: 292 SKEIKKLTETYLTDPVQVSV 311
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP I + P +G A++L+PTRELA QI + FG +
Sbjct: 148 QTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNF 207
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T GGAP R+Q RDL +GV+I++
Sbjct: 208 THAIGGAPIRKQMRDLSKGVDILV 231
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +1
Query: 481 SDQYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAEN 660
+D ++ T N + +I K+NK + LQ I S P + I+F TK ++
Sbjct: 304 TDPVQVSVTPENSTVDKIEQSLMHLSKQNK-GLALQRI-ISANPKKRVIVFSRTKHGSDK 361
Query: 661 ISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ + + A +HG+K+Q +R L F
Sbjct: 362 LVKWLGTQNIGADAIHGNKSQGQRQRALDDF 392
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
L +G+ TPGR+ID L +L R T+LV+DEADRM DMGFEPQ+ K+ + IR
Sbjct: 506 LKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVLKLTQSIR 565
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
PDRQT+++SAT+PK++++LA L ++G +++
Sbjct: 566 PDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGPIEI 602
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRR--------GDGPIALVLAPTRELAQQIQQVAADF 158
+TGSGKTLA++LP + HI ++ + P+ +++ PTREL QI + F
Sbjct: 423 KTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPF 482
Query: 159 GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ C +GG+P ++Q L++G I++
Sbjct: 483 LAALELTAVCAYGGSPIKDQIAALKKGTHIIV 514
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 610 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
P K +IFVE + A+++ + + + G+P + +HG K Q +RD+ + F
Sbjct: 663 PNPKCLIFVERQESADSLLKELIQSGYPCLSIHGGKEQADRDQAISDF 710
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ D +E G L +++VLDEADRMLDMGFEP++R I+ Q RQT+M+SATWP
Sbjct: 287 TPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWP 346
Query: 437 KEVKKLAEDYLG-DYIQINIGSLQL 508
V +LA++++ + I++ IGS L
Sbjct: 347 PAVHQLAQEFMDPNPIKVVIGSEDL 371
Score = 69.3 bits (162), Expect = 9e-11
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V + G +
Sbjct: 138 TGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLCEAGAPCGI 196
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ C++GG K Q L+ GV+IVI
Sbjct: 197 SSVCLYGGTSKGPQISALKSGVDIVI 222
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 90.2 bits (214), Expect = 5e-17
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWS 424
TPGRL DFL K +L YL+LDEADRMLDMGF P+I+ II + DR TLM+S
Sbjct: 488 TPGRLKDFLGKRKISLANLKYLILDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFS 547
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSL 502
AT+P E++ LA ++L +Y+ + IG +
Sbjct: 548 ATFPTEIQNLAAEFLNNYVYLTIGKV 573
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 167
QTGSGKT A+++P + + ++ + P+ALV+APTRELA QIQ+ A F
Sbjct: 398 QTGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQN 457
Query: 168 SYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ ++ ++GG R +++ +++
Sbjct: 458 TSIKPVVIYGGVQVAYHLRQVQQDCHLLV 486
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/78 (30%), Positives = 45/78 (57%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I Q + +E K +KL +L G + + ++FV+TKR A+ ++ + + G+
Sbjct: 579 DITQCIMEVEESAKRDKLIEILDTEGTN-----RNLVFVQTKRLADFLASYLCQNGFHTT 633
Query: 700 CMHGDKTQQERDEVLYQF 753
+HGD+ QQ+R+E L +F
Sbjct: 634 SIHGDRLQQQREEALAEF 651
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFNRAGVPARC 208
Query: 186 C-VFGGAPKREQARDLERGVEIVI 254
C +FGGA K EQ + L G EIV+
Sbjct: 209 CAIFGGASKHEQLKRLRAGAEIVV 232
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/36 (69%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = +2
Query: 254 STPGRLIDFLE-KGTTNLQRCTYLVLDEADRMLDMG 358
+TPGRLID L K + +L+R TYL LDEADRMLDMG
Sbjct: 233 ATPGRLIDVLHVKNSIDLRRVTYLALDEADRMLDMG 268
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII--EQIRP--DRQTLMW 421
+TPGRL+DF+EKG +LVLDEADRMLDMGF P I K++ E + P +RQTLM+
Sbjct: 329 ATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMF 388
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P EV+ LA +L +Y+ + +G
Sbjct: 389 SATFPDEVQHLARRFLNNYLFLAVG 413
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +1
Query: 553 HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 732
++K++ L +L+ S G T++FVE K+KA+ I+ + +P +HGD+ Q++R
Sbjct: 432 NKKKDLLKEILERENDSGTLGG-TLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQR 490
Query: 733 DEVLYQF 753
+E L F
Sbjct: 491 EEALADF 497
Score = 41.5 bits (93), Expect = 0.022
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A+ +P I + + P ++++PTREL QI Q F S
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
++ +GG Q L G I++
Sbjct: 301 ILKTVVAYGGTSVMHQRGKLSAGCHILV 328
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 89.8 bits (213), Expect = 6e-17
Identities = 42/85 (49%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWS 424
TPGRL+D +++G L + YLVLDEADRMLDMGFEP +R+++ + +RQTL++S
Sbjct: 412 TPGRLLDVIQRGWIGLTKLRYLVLDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFS 471
Query: 425 ATWPKEVKKLAEDYL-GDYIQINIG 496
AT+P++++KLA D+L DY+ + +G
Sbjct: 472 ATYPQDIQKLAADFLKTDYLFLAVG 496
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRG----DGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A++LP + + P A+++APTREL QI A F + +
Sbjct: 323 QTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVAPTRELINQIFLEARKFAYGT 382
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIV 251
VR V+GG Q R++ +G IV
Sbjct: 383 CVRPVVVYGGVNTGFQLREISKGCNIV 409
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 729
++ K +L L+ IG +T++FVETKR+A+ I+ + + P +HGD+ Q+E
Sbjct: 514 KYSKREQLLDFLKTIGNE-----RTMVFVETKRQADFIATFLCQEELPTTSIHGDREQRE 568
Query: 730 RDEVLYQF 753
R++ L F
Sbjct: 569 REQALADF 576
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 89.4 bits (212), Expect = 8e-17
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +2
Query: 323 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
VLDEADRMLD+GFEPQI KI+ +RPDRQT+M SATWP V+++A YL D + + +GSL
Sbjct: 253 VLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSATWPASVRRMATSYLKDPMMVYVGSL 312
Query: 503 QLPQITT 523
L +++
Sbjct: 313 DLTAVSS 319
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ + + Y +
Sbjct: 120 QTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-K 178
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ CV+GG ++ Q +ERGV+IVI
Sbjct: 179 SVCVYGGGDRKAQIHKVERGVDIVI 203
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
+I+ + E +K LN L ++ EP K +IFV K A+++S ++ YG C+H
Sbjct: 323 KILIVSAEEKKPYLLNFL-----KNMEPQDKVLIFVGRKLTADDLSSDLCLYGESVQCLH 377
Query: 709 GDKTQQERDEVLYQF 753
G Q +R+E L F
Sbjct: 378 GGHEQCDREEALKDF 392
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 89.4 bits (212), Expect = 8e-17
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL DF+ +G NL L+LDE+DRMLDMGF P I++II + +RQTL++SAT
Sbjct: 128 ATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATL 187
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLP 511
VK+L E ++ + ++I +GS+ P
Sbjct: 188 ESSVKQLVETHVRNAVRIELGSISKP 213
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKTLA++LP I ++ +P R G AL+L PTRELA QI + + +R
Sbjct: 47 QTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQIARGTGIRA 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
GG +R Q RD+ G IV+
Sbjct: 104 AVAVGGLNERSQLRDIRGGANIVV 127
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 89.4 bits (212), Expect = 8e-17
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 254 STPGRLIDFLEK--GTT---NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 418
+TPGRL DFLE G T + + Y+VLDEADRMLDMGFEPQI+KI + RQT+M
Sbjct: 228 ATPGRLNDFLEPPPGFTAPVSAVKAAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVM 287
Query: 419 WSATWPKEVKKLAEDYLGDYIQINIGS 499
++ATWPK V+K+A+ + I I IGS
Sbjct: 288 FTATWPKGVQKIADAFTTKPIHIQIGS 314
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRELAQQIQQ 143
+TGSGKT ++LPA+ I P ++ DG P +VLAPTRELA QI
Sbjct: 131 KTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELAIQIHD 190
Query: 144 VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
A F + R+ ++GGA K +Q R L G ++V+
Sbjct: 191 ECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVV 227
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENK-LNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 684
+AN +I Q V++ +E EK ++ + +L +E+G+++ I+F TKR+ + + R +++
Sbjct: 320 TANKSITQTVEVVEEEEKFDRCVAILKKELGKNET----CIMFAGTKRRCDFLDRRLKQV 375
Query: 685 GWPAV-CMHGDKTQQERDEVLYQF 753
G+ + +HGDK Q ER+ VL F
Sbjct: 376 GFSSAGSIHGDKDQYEREMVLDNF 399
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 89.4 bits (212), Expect = 8e-17
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA++LP + HI +QPP+ GDGPI L++APTREL QQI F +
Sbjct: 529 KTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISC 588
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ +Q +L+RG E+V+
Sbjct: 589 VPVYGGSGVAQQISELKRGAEVVV 612
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRPD--RQTLMW 421
+TPGRL DF+++G N Q YL+LDEAD+M+DMGF PQI IIE + P R TLM+
Sbjct: 585 ATPGRLEDFIKRGKVNFQNLKYLILDEADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMF 644
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P +++ LA +L DY+ + +G
Sbjct: 645 SATFPDQIQHLAAQFLNDYLFLTVG 669
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGH 164
QTGSGKT +++LP I ++ N+ I DG P+A +LAPTREL Q+ A F +
Sbjct: 495 QTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFTEARKFSY 554
Query: 165 TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
S ++ ++GG QA L G +++
Sbjct: 555 NSSLKPVVLYGGVAVAHQADRLRMGCHLLV 584
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
+K L LLQ G Q T++FVE KR A+ ++ + + +P + D+T+++R+
Sbjct: 689 KKRETLENLLQTSGTDQ-----TLVFVEKKRDADFLANFLSQKNFPPTILFADRTREKRE 743
Query: 736 EVLYQF 753
L F
Sbjct: 744 SALRDF 749
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI---RPDRQTLMWSA 427
TPGR +D + G +L +YLVLDEADRMLD GFE IR+II + RQT+M+SA
Sbjct: 312 TPGRTLDLADSGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSA 371
Query: 428 TWPKEVKKLAEDYLGDYIQINIGSLQL 508
TWP+ V++LA +L + ++I +GS +L
Sbjct: 372 TWPESVRRLASTFLNNPLRITVGSDEL 398
Score = 67.3 bits (157), Expect = 4e-10
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQIQQVAADF 158
+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ + + F
Sbjct: 218 ETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSAF 277
Query: 159 GHTSYVRNTCVFGGAPKREQARDL-ERGVEIVI 254
G +++ C+FGG K QAR+L ++ +V+
Sbjct: 278 GEQVGLKSVCIFGGVGKDGQARELSQKDTRVVV 310
Score = 40.7 bits (91), Expect = 0.038
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +1
Query: 508 SANHNILQIVDICQE-HEKE----NKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 672
SAN I QIV++ +K+ + L L+ S+ + ++F K++A+ +
Sbjct: 399 SANKRIEQIVEVLDNPRDKDFRLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLEYT 458
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
IRR G+ +HGD TQ+ R + L F
Sbjct: 459 IRRAGYAVGALHGDMTQEARFKALEAF 485
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E+GT L LVLDE DRMLDMGF P +++I++Q RQTL +SAT
Sbjct: 257 ATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSATL 316
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLPQIT 520
P E+ +LA L D ++I IG + P T
Sbjct: 317 PPELAQLASWALRDPVEIKIGQRRSPAET 345
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + + R LVL PTRELA Q+++ + + +
Sbjct: 178 QTGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVEEAFQKYSKYTDLTA 232
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
T V+GG +Q DL+RGV++V
Sbjct: 233 TVVYGGVGYGKQREDLQRGVDVV 255
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
IIF TK A+ I+ ++R G +H D+ Q+ER E L F
Sbjct: 375 IIFTRTKMGADRIAHRLQREGHTVGVIHSDRNQRERVEALEGF 417
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 TPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
TPGRL D + ++G +L++ + +VLDEADRMLDMGFEPQI+ I RQTL++SATW
Sbjct: 173 TPGRLTDLMSQEGVLSLEKLSVIVLDEADRMLDMGFEPQIKTIFGATPASRQTLLFSATW 232
Query: 434 PKEVKKLAEDYL 469
PK V+KLA YL
Sbjct: 233 PKSVRKLAACYL 244
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN I Q ++HEK+ L L+ E+ ++ +IF TKR+ EN+++ G
Sbjct: 266 AANKAITQRFVEARDHEKDEHLYNLICELPDD----SRVVIFANTKRRVENLAKTFSAEG 321
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ V +HGDK+Q +R+ L +F
Sbjct: 322 FGVVSVHGDKSQADREASLRKF 343
Score = 42.7 bits (96), Expect = 0.009
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+ H +++ G LV+APTRELA QIQ FG +
Sbjct: 98 KTGSGKTLAF------H-----GMKKHGGVEGLVVAPTRELAIQIQAECEKFGAERGFHS 146
Query: 183 TCVFGGAPKREQARDLERGVEIVIL 257
V+GGA EQ L +++
Sbjct: 147 VVVYGGASAYEQKNALRSKKPCIVI 171
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFL--EKG-TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGRLI+ L G TNL+R T++V+DEADRM D+GF PQI I++ IRPDRQT ++SA
Sbjct: 518 TPGRLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSA 577
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P ++ LA+ L +QI +G
Sbjct: 578 TFPPTIEALAKKILTKPLQIIVG 600
Score = 86.2 bits (204), Expect = 8e-16
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++ +R
Sbjct: 433 ETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRT 492
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
V+GG+P EQ L+RGVEIV
Sbjct: 493 KAVYGGSPIGEQLNALKRGVEIV 515
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/65 (26%), Positives = 36/65 (55%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
+ K+ LL+ +G+ E G+ I+FV + A+++ + ++G+ +HG + Q +R+
Sbjct: 618 ERQKMYALLKLLGEWHEHGS-IIVFVNRQLDADSMYAELIKHGYDCAVLHGGQDQTDREF 676
Query: 739 VLYQF 753
L F
Sbjct: 677 TLQDF 681
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 87.8 bits (208), Expect = 3e-16
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGRLID L TNL+R T +V+DEADRM D+GFEPQI KI+ RPD+QT+++S
Sbjct: 836 ATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTVLFS 895
Query: 425 ATWPKEVKKLAE 460
AT+PK V+ LA+
Sbjct: 896 ATFPKNVENLAK 907
Score = 86.6 bits (205), Expect = 6e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 752 ETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYEI 811
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG + Q +L+RG EIV+
Sbjct: 812 VAVFGGTGIKGQLSELKRGCEIVV 835
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMW 421
+TPGRL+DF+ +G L +++LDEADRMLDMGFE +IRK+ + DR TLM+
Sbjct: 446 ATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIRKLASSPGMPSKSDRHTLMF 505
Query: 422 SATWPKEVKKLAEDYL-GDYIQINIG 496
SAT+P E+++LA D+L D++ + +G
Sbjct: 506 SATFPDEIQRLAHDFLREDFLFLTVG 531
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A++LP + I N P A+V+ PTREL QI A F +
Sbjct: 358 QTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGT 417
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
VR +GG Q RDL+RG I+I
Sbjct: 418 VVRPVVAYGGTSMNHQIRDLQRGCHILI 445
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
++++K LL+ I E ++T++FVETKR A+ ++ + + G P +HGD+ QQER+
Sbjct: 548 DQDDKRAKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQERE 607
Query: 736 EVLYQF 753
+ L F
Sbjct: 608 QALRDF 613
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 87.8 bits (208), Expect = 3e-16
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A + +R
Sbjct: 714 ETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRI 773
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ Q L+RGVEI++
Sbjct: 774 LAVYGGSNIGTQLNTLKRGVEILV 797
Score = 79.8 bits (188), Expect = 7e-14
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 799 TPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISA 858
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P ++ LA+ L I+I +G
Sbjct: 859 TFPNYIQNLAKKLLYKPIEIIVG 881
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N+NI Q V++ E K+ LL+ +G+ G +IFV + +A+ + + +Y +
Sbjct: 887 NNNIYQFVEVL---EGGKKIYRLLKLLGEWSSYGL-ILIFVNRQLEADLLYLELFKYDYK 942
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HG + Q +R+ L F
Sbjct: 943 TLVLHGGQDQADREFTLQTF 962
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 87.8 bits (208), Expect = 3e-16
Identities = 38/83 (45%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSA 427
+TPGRL+DF+++ + ++VLDEADRMLDMGF +R+I+ + RP+ QTLM+SA
Sbjct: 374 ATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSA 433
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P+E++++A ++L +Y+ + IG
Sbjct: 434 TFPEEIQRMAGEFLKNYVFVAIG 456
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT A++LP + + P P ++++PTRELA QI A F SY++
Sbjct: 290 QTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKI 349
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG R Q + RG +VI
Sbjct: 350 GIVYGGTSFRHQNECITRGCHVVI 373
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
I A ++ Q + ++ K +KL +L E Q G TI+FVETKR A+ ++ +
Sbjct: 457 IVGGACSDVKQTIYEVNKYAKRSKLIEILSE----QADG--TIVFVETKRGADFLASFLS 510
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
+P +HGD+ Q +R++ L F
Sbjct: 511 EKEFPTTSIHGDRLQSQREQALRDF 535
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D L + T +L + +VLDEAD MLDMGF I KI++ +RQTL++SAT P
Sbjct: 131 TPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFSATMP 190
Query: 437 KEVKKLAEDYLGDYIQINIGSLQL--PQITTFF 529
E+++LA Y+ D I I++ QL PQI +F
Sbjct: 191 PEIRRLAGRYMRDPITISVTPQQLTVPQIDQYF 223
Score = 52.8 bits (121), Expect = 9e-06
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + + P +R ALVL PTRELA Q+ + G + V+
Sbjct: 51 QTGTGKTAAFGVPIVERL---VPGQRAVQ--ALVLTPTRELAIQVAEEITKIGRHARVKT 105
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q R L GV++VI
Sbjct: 106 IAIYGGQSIERQIRSLRFGVDVVI 129
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D L K NL+ C YLVLDEADRMLDMGFE +I+ I + RQTL++SAT
Sbjct: 328 ATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATM 387
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
P++++ A+ L I +N+G
Sbjct: 388 PRKIQFFAKSALVKPIVVNVG 408
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----FGH 164
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + + G
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK 295
Query: 165 TSY--VRNTCVFGGAPKREQARDLERGVEIVI 254
+R GG P EQA+D+ G+ IV+
Sbjct: 296 AGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVV 327
Score = 32.7 bits (71), Expect = 10.0
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 535 VDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGD 714
+++ QE E N L++ + Q+ K +IF E K +NI + G +HG
Sbjct: 415 LNVLQELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGG 474
Query: 715 KTQQER 732
K Q +R
Sbjct: 475 KDQSDR 480
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR---PDRQTLMWSA 427
TPGR++D G+ +L TYLVLDEADRMLD GFEP IR II + R T M+SA
Sbjct: 298 TPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSREEGRHTSMFSA 357
Query: 428 TWPKEVKKLAEDYLGDYIQINIGSLQL 508
TWP V+ LAE ++ +++ +GS +L
Sbjct: 358 TWPPAVRGLAESFMNGPVRVTVGSDEL 384
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADFG 161
+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q ++ A G
Sbjct: 204 ETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLG 263
Query: 162 HTSYVRNTCVFGGAPKREQARDLERGVEIVILL 260
+ + C++GG K+EQ R L + + I++
Sbjct: 264 KSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVV 296
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 SANHNILQIVDICQE-HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 684
SAN + Q V++ + + KE +LN L+ + +Q K +IF K++A+ I + +RR
Sbjct: 385 SANRRVEQTVEVLADGYAKERRLNDFLRSVN-AQRSKDKILIFALYKKEAQRIEQTLRRG 443
Query: 685 GWPAVCMHGDKTQQERDEVLYQF 753
G+ +HGD Q ER L +F
Sbjct: 444 GFKVSGIHGDLGQNERIASLERF 466
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP--DRQTLMWSA 427
+TPGRL DFL +G+ +L ++ VLDEADRMLD GF I+ I+ P RQTLM++A
Sbjct: 315 ATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTA 374
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
TWP +++KLAE Y+ + Q+ IG
Sbjct: 375 TWPLDIQKLAESYMINPAQVTIG 397
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQVAADFGHT 167
+TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q +
Sbjct: 224 ETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAALSGLASL 283
Query: 168 SYVRNTCVFGGAPKREQARDL--ERGVEIV 251
+ C+FGG+ K EQ L GV+I+
Sbjct: 284 VGLSAVCIFGGSDKNEQRNLLYKNNGVDII 313
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D E+G L C LV+DEADRMLDMGF P I I ++ RQTL++SAT
Sbjct: 128 ATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLFSATM 187
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P +KKLA+ +L + QI I
Sbjct: 188 PPAIKKLADRFLSNPKQIEI 207
Score = 56.4 bits (130), Expect = 7e-07
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT +++LP I + + R P +L+L PTRELA Q+ + +G +
Sbjct: 46 QTGTGKTASFVLPMIDILAHGRC--RARMPRSLILEPTRELAAQVAENFEKYGKYHKLSM 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ + GG P EQ LE+GV+++I
Sbjct: 104 SLLIGGVPMAEQQAALEKGVDVLI 127
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 87.0 bits (206), Expect = 4e-16
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D L K NL C YL LDEADR++D+GFE IR++ + + RQTL++SAT
Sbjct: 320 ATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATM 379
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
PK+++ A+ L + +N+G
Sbjct: 380 PKKIQNFAKSALVKPVIVNVG 400
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ----IQQVAADFGH 164
TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q I+Q
Sbjct: 228 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 287
Query: 165 TSY--VRNTCVFGGAPKREQARDLERGVEIVI 254
Y +R GG R Q +++GV IV+
Sbjct: 288 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVV 319
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 535 VDICQEHE--KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
+D+ QE E KE+ + L E Q P ++F E K + I + G AV +H
Sbjct: 407 LDVIQEVEYVKEDARIIYLLECLQKTPP--PVLVFCENKADVDYIHEYLLLKGVEAVAIH 464
Query: 709 GDKTQQERDEVLYQF 753
G K Q+ER+ + F
Sbjct: 465 GGKDQEERENAIEFF 479
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 86.6 bits (205), Expect = 6e-16
Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII--EQIRP--DRQTLMW 421
+TPGRL+D + KG ++VLDEADRMLDMGF P + K++ + ++P +RQTLM+
Sbjct: 437 ATPGRLLDLVGKGKITFDAIEFVVLDEADRMLDMGFLPDVEKVLRHDTMKPPGERQTLMF 496
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P+E+++LA +L +Y+ + +G
Sbjct: 497 SATFPQEIQQLAAKFLNNYVFVTVG 521
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 158
QTGSGKT A+++P I+H +++ + + P AL+++PTREL QI A F
Sbjct: 347 QTGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTRELTIQIFDEARKF 404
Query: 159 GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
S ++ ++GG Q + + +GV+I++
Sbjct: 405 SKDSVLKCHIIYGGTSTSHQMKQIFQGVDILV 436
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLL-QEIGQSQEPGAKTIIFVETKRKAENISRNI 675
I SA +I Q ++ +K KL LL +EI Q+ G ++FV K+ A+ I+ +
Sbjct: 522 IVGSACTDIEQSFFEVKKSDKRTKLKELLNEEIEQNMLNGI--LVFVSEKKTADFIAALL 579
Query: 676 RRYGWPAVCMHGDKTQQERDEVLYQF 753
+P +HGD+ Q+ER+E LY F
Sbjct: 580 SEDNFPTTSIHGDRLQREREEALYDF 605
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 86.2 bits (204), Expect = 8e-16
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMW 421
+TPGRL+DF+++G + ++VLDEADRMLDMGF P I K++ + RQTLM+
Sbjct: 305 ATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMF 364
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P E+++LA +L +YI + +G
Sbjct: 365 SATFPAEIQELAGKFLHNYICVFVG 389
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTGSGKT A++LP I H+ + + + R P +++APTRELA QI F H + +
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKL 278
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ +GG + Q + + G +++
Sbjct: 279 KVCVSYGGTAVQHQLQLMRGGCHVLV 304
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
I A ++ Q + + ++ +K KL +EI P T++FVETKR A+ ++ +
Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-TLVFVETKRNADYLASLMS 444
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
+P +HGD+ Q+ER+ LY F
Sbjct: 445 ETQFPTTSIHGDRLQREREMALYDF 469
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 86.2 bits (204), Expect = 8e-16
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD------RQTLM 418
TPGRL+D + G+ + + YLVLDEADRMLD GFE IR II PD RQT+
Sbjct: 292 TPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISH-TPDPTRNGSRQTVF 350
Query: 419 WSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
+SATWP+ V+ LA +L D ++I IGS +L
Sbjct: 351 FSATWPESVRALAATFLKDPVKITIGSDEL 380
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q + + ++
Sbjct: 210 ETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENLNSLIQGTNLKA 267
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
V+GGAPK EQAR + I+
Sbjct: 268 VVVYGGAPKSEQARAAKNASVII 290
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L+K L C YL +DEADRM+DMGFE +R I + RQTL++SAT
Sbjct: 315 ATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATM 374
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
PK+++ A L + IN+G
Sbjct: 375 PKKIQNFARSALVKPVTINVG 395
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTS- 170
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++ + H
Sbjct: 223 TGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQA 282
Query: 171 ----YVRNTCVFGGAPKREQARDLERGVEIVI 254
+R+ GG P E + RGV IV+
Sbjct: 283 CGMPEIRSCLAMGGLPVSEALDVISRGVHIVV 314
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G+ +TPGRL+ L+ GT NL++ +LVLDEADRMLDMGF I ++I + +R
Sbjct: 120 LTDGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTER 179
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINI 493
QT+M+SAT P +++ LA + D QINI
Sbjct: 180 QTIMFSATMPTKMRALANKLMKDPQQINI 208
Score = 50.0 bits (114), Expect = 6e-05
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT AY+LP + I D LVL PTRELA QI Q F + V +
Sbjct: 46 QTGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSS 101
Query: 183 TCVFG---GAPKREQARDLERGVEIVI 254
V+G GA +Q + L G IVI
Sbjct: 102 IAVYGGGDGATWDQQRKALTDGANIVI 128
Score = 35.1 bits (77), Expect = 1.9
Identities = 25/89 (28%), Positives = 40/89 (44%)
Frame = +1
Query: 487 QYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENIS 666
Q I + ILQ + E +K N L++ I S + IIF TK + +
Sbjct: 205 QINIAISKPAEGILQQAYLVYEEQK----NKLIKHILSSGNFNS-IIIFSSTKEHVKKLE 259
Query: 667 RNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
R++ G+ H D Q+ER+E++ F
Sbjct: 260 RDLSNMGFSLKGFHSDLEQEEREEIMRAF 288
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +++ T NL + LVLDEADRMLDMGF P +++I+ + +RQTL++SAT+
Sbjct: 143 ATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATF 202
Query: 434 PKEVKKLAEDYL 469
E+KKLA YL
Sbjct: 203 SPEIKKLASTYL 214
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKT ++ LP I + Q P+ AL+L PTRELA Q+ + +
Sbjct: 56 QTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTP 115
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+R+ VFGG Q +L RGVEI+I
Sbjct: 116 LRSAVVFGGVDMNPQMAELRRGVEILI 142
Score = 37.9 bits (84), Expect = 0.27
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +1
Query: 502 TTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRR 681
+ +A + QIV E +K+ + L+++ Q I+F +K A ++R I R
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQ-----VIVFCNSKIGASRLARQIER 279
Query: 682 YGWPAVCMHGDKTQQERDEVLYQF 753
G A +HGD++Q ER + L F
Sbjct: 280 DGIIAAAIHGDRSQSERMQALDAF 303
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQTLMW 421
+TPGRL+D +E+ +L+ YL LDEADRMLDMGFEPQIRKI+EQ+ P RQT+++
Sbjct: 252 ATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLF 311
Query: 422 SATWPKEVKKLAEDYLGDYIQI 487
SAT+P E++ L D+L Y +
Sbjct: 312 SATFPNEIQIL--DHLEFYAAV 331
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSY 173
QTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A F + +
Sbjct: 165 QTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTG 224
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
++ +GGAP +Q R+LERGV+I++
Sbjct: 225 LKVVVAYGGAPISQQFRNLERGVDILV 251
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG--AKTIIFVETKRKAENISRNIRR 681
S+ I+Q V+ ++ +K L LLQ ++ P A T++FVETKR + + + +
Sbjct: 495 SSTDLIVQRVEFVEDTDKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCM 554
Query: 682 YGWPAVCMHGDKTQQERDEVLYQF 753
G A +HGDK Q ER+ + F
Sbjct: 555 NGLAATAIHGDKVQMERERAMKSF 578
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL++FL+ T N Q CTY+V+DEADR+ + GF Q+R I++ IRPDRQTL++ AT P
Sbjct: 243 TPGRLMNFLK--TVNWQFCTYVVVDEADRIFETGFLRQLRSIMDYIRPDRQTLLFGATLP 300
Query: 437 KEVKKLAEDYLGDYIQINIGSLQLPQ 514
++++L+ + L ++ IG PQ
Sbjct: 301 PQIEELSMNSLKFSTRVQIGKTGAPQ 326
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TG+GKTL +++P + H+ Q + +GP AL+L+PT LA+Q V ++ ++
Sbjct: 162 TGTGKTLCFLIPLLYHVLAQG---KQEGPTALILSPTELLARQTTLVCHQLIKSTDIKCV 218
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
+ G K +Q L +G +++I
Sbjct: 219 ELTGNQMKHKQQSSLMKGADVII 241
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQTLMW 421
+TPGRLID L++ L +L+LDEADRMLDMGFEPQ++++I + P DRQT+++
Sbjct: 247 ATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQMQEVINGWDMPPADDRQTMLF 306
Query: 422 SATWPKEVKKLAEDYL-GDYIQINIGSLQLPQ 514
SAT+P V+ LA D++ Y +I++G P+
Sbjct: 307 SATFPDAVRNLARDFMRPKYCRISVGMQDAPK 338
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT A++LP I + P + L PTRELA QI + F + ++
Sbjct: 166 QTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKT 222
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
TCVFGGAP EQ R+L RG++IVI
Sbjct: 223 TCVFGGAPITEQIRNLSRGIDIVI 246
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D + +GT NL+ Y +LDEAD ML+MGF + KI+ D++ L++SAT P
Sbjct: 130 TPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSATMP 189
Query: 437 KEVKKLAEDYLGDY 478
+E+ LA+ Y+GDY
Sbjct: 190 REILNLAKKYMGDY 203
Score = 38.7 bits (86), Expect = 0.15
Identities = 27/96 (28%), Positives = 47/96 (48%)
Frame = +1
Query: 466 LGRLHSDQYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETK 645
L + + Y I N NI Q E+E+ L LL+ + G ++F +TK
Sbjct: 195 LAKKYMGDYSFIKAKINANIEQSYVEVNENERFEALCRLLKN---KEFYG---LVFCKTK 248
Query: 646 RKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
R + ++ +R G+ A +HGD +Q +R++V+ F
Sbjct: 249 RDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLF 284
Score = 37.9 bits (84), Expect = 0.27
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT ++ +P I +N +G A++L PTRELA Q+ ++
Sbjct: 52 RTGSGKTASFAIPLIELVNEN------NGIEAIILTPTRELAIQVADEIESLKGNKNLKI 105
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
++GG Q + L+ +V
Sbjct: 106 AKIYGGKAIYPQIKALKNANIVV 128
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/78 (48%), Positives = 56/78 (71%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E+ N + LVLDEADRMLDMGF P I++++ + P RQ+LM+SAT+
Sbjct: 137 ATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSATF 196
Query: 434 PKEVKKLAEDYLGDYIQI 487
E++KLA+ L ++I
Sbjct: 197 SGEIRKLADSLLKQPVRI 214
Score = 56.4 bits (130), Expect = 7e-07
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKT + LP + + + P+ AL++APTRELA QI + +G
Sbjct: 50 QTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLA 109
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+R VFGG Q L+ GVEI++
Sbjct: 110 LRTAVVFGGINIEPQIAALQAGVEILV 136
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +1
Query: 562 ENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEV 741
++K +LL I Q A +IFV+TK A ++++ + R+ AV +HGD+ QQ+R +
Sbjct: 236 DSKFALLLHLIRQQNLKQA--LIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQA 293
Query: 742 LYQF 753
L +F
Sbjct: 294 LAEF 297
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII--EQIRP--DRQTLMW 421
+TPGRL+DFLEKG YLVLDEADRMLDMGF I+ +I + + P +R TLM+
Sbjct: 394 ATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINHKTMTPTAERITLMF 453
Query: 422 SATWPKEVKKLAEDYLGDYIQINIGSL 502
SAT+P E+++LA +L +Y+ + +G++
Sbjct: 454 SATFPHEIQELASAFLNNYLFVVVGTV 480
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A++LP + +I NN P P LV+ PTRELA QI + A F H+S
Sbjct: 306 QTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHSS 365
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+ +GGA Q + + G I++
Sbjct: 366 VAKCCVAYGGAAGFHQLKTIHSGCHILV 393
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN ++ Q V + EK+ KL + +EI S + K ++FVE KR A+ + +
Sbjct: 482 AANTDVKQEVLCVPKFEKKAKLVEMCEEILISADD-EKILVFVEQKRVADFVGTYLCEKK 540
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ A MHGD+ Q +R++ L +F
Sbjct: 541 FRATTMHGDRYQAQREQALSEF 562
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR D ++K N+ C Y+VLDEADR+LDM FE +IR II+ + RQTL++S+T P
Sbjct: 291 TPGRTSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIRNIIDHVPGARQTLLFSSTMP 350
Query: 437 KEVKKLAEDYLGDYIQINIG 496
K+V+ A+ L D I +N+G
Sbjct: 351 KKVQDFAKQALIDPIIVNVG 370
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 TGSGKTLAYILPAIV----HINNQPPIRRGDGPIALVLAP-TRELAQQIQQVAADFGHTS 170
TG GKT+ ++LPA+V H N P+ RG+GP+A+++ P T ELA Q + G+
Sbjct: 182 TGQGKTIVFLLPALVMAIEHEMNM-PLFRGEGPLAIIIVPSTYELACYYSQKLQEAGYPQ 240
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIV 251
+R + GG +Q + GV ++
Sbjct: 241 -IRCSLSIGGMDMMQQIAQVREGVHLI 266
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N N++Q V+ ++ EK L L+ + +++ P +IF + ++I + G
Sbjct: 376 NLNVIQEVEYVKQEEK---LQYLISCLQKTKPP---VLIFCDKSNDVDDIHEYLLLKGID 429
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+HG K Q+ER + + +F
Sbjct: 430 VTSLHGGKKQEERTKAMKEF 449
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQTLMW 421
+TPGRL+D + K L++ YLVLDEADRMLDMGF P+++K+I + RQTLM+
Sbjct: 421 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 480
Query: 422 SATWPKEVKKLAEDYL-GDYIQINIGSL 502
SAT+P+E+++LA ++L +Y+ + +G +
Sbjct: 481 SATFPEEIQRLAAEFLKSNYLFVAVGQV 508
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A++LP + H+ + + P +++APTREL QI A F +
Sbjct: 333 QTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT 392
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIV 251
VR ++GG R + +G I+
Sbjct: 393 CVRAVVIYGGTQLGHSIRQIVQGCNIL 419
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +1
Query: 511 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 690
A ++ Q V + K KL +L+ IG +T++FVETK+KA+ I+ + +
Sbjct: 511 ACRDVQQTVLQVGQFSKREKLVEILRNIGDE-----RTMVFVETKKKADFIATFLCQEKI 565
Query: 691 PAVCMHGDKTQQERDEVLYQF 753
+HGD+ Q+ER++ L F
Sbjct: 566 STTSIHGDREQREREQALGDF 586
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L+K L C YL +DEADRM+DMGFE +R I RQTL++SAT
Sbjct: 317 ATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSATM 376
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
PK+++ A L + IN+G
Sbjct: 377 PKKIQNFARSALVKPVTINVG 397
Score = 56.4 bits (130), Expect = 7e-07
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF------ 158
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q + +
Sbjct: 225 TGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRH 284
Query: 159 GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
H +R GG P E + RGV I++
Sbjct: 285 HHCPEIRCCLAIGGVPVSESLDVISRGVHIMV 316
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G + TPGR+ID L + T L ++LDEAD MLDMGF I I+ Q++ +R
Sbjct: 120 LKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNER 179
Query: 407 QTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLPQITTFF 529
QTL++SAT P +KKL+ Y+ D + IN + P I F+
Sbjct: 180 QTLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFY 222
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + ++ ++ AL+L PTRELA Q+ +R
Sbjct: 51 QTGTGKTAAFGIPVVEKVSTGRHVQ------ALILTPTRELAIQVSGEIQKLSKHKKIRT 104
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q + L++GV++VI
Sbjct: 105 LPIYGGQSIVHQIKALKQGVQVVI 128
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
+ NKL+ L + I Q I+F TK+ ++ ++ G+ A +HGD TQ +RD
Sbjct: 227 ERNKLDSLCRIIDSEQIDLG--ILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDA 284
Query: 739 VLYQF 753
V+ +F
Sbjct: 285 VMRKF 289
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/79 (46%), Positives = 57/79 (72%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D +EKGT +L+R YLV+DEAD ML+MGF Q+ II+++ R T+++SAT P
Sbjct: 129 TPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLP 188
Query: 437 KEVKKLAEDYLGDYIQINI 493
++V++L+ Y+ I I
Sbjct: 189 EDVERLSRTYMNAPTHIEI 207
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT ++ +P + + + P ALVL PTRELA Q+++ + G ++
Sbjct: 49 QTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELAVQVKEDITNIGRFKRIKA 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++G +P Q +L++ IV+
Sbjct: 104 AAIYGKSPFARQKLELKQKTHIVV 127
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 729
E +E KL+ LL+++ + P + IIF T+ +++ R + R +P +HG Q++
Sbjct: 223 EVREEEKLS-LLKDVTTIENPDS-CIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQED 280
Query: 730 RDEVLYQF 753
R V+ F
Sbjct: 281 RFGVMDDF 288
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/97 (44%), Positives = 61/97 (62%)
Frame = +2
Query: 224 GLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 403
G+ G+ +TPGRLI L G+ +L +Y VLDEADRMLDMGF I +I +Q+
Sbjct: 121 GMAMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSS 180
Query: 404 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLPQ 514
QT+M+SAT P +++KLA L D I++ I + P+
Sbjct: 181 CQTVMFSATMPPKIRKLAASILRDPIEVEIAISRPPE 217
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT AY+LP + ++ D A+++APTRELAQQI Q F + V
Sbjct: 46 QTGTGKTAAYLLPILDRLSAGE--FASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSA 103
Query: 183 TCVFGGAPK---REQARDLERGVEIVI 254
++GG +Q R + G +IVI
Sbjct: 104 VAIYGGTDGVAWEQQRRGMAMGADIVI 130
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I+Q IC E +K L L + Q +TIIF K K ++ +R+ G+
Sbjct: 218 SIMQSAYICHEAQKLPILRKLFE-----QSAPKRTIIFASAKLKVRELTSTLRKMGFNVA 272
Query: 700 CMHGDKTQQERDEVLYQF 753
MH D Q +R++V+ F
Sbjct: 273 DMHSDLEQSQREQVMRDF 290
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD--RQTLMWSA 427
+TPGR+ D LEK T L +C+Y++LDEADRM+D+GF+ + I++QI P+ R T M+SA
Sbjct: 278 ATPGRMQDCLEKTLTVLVQCSYVILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSA 337
Query: 428 TWPKEVKKLAEDYLGDYIQINIGSL 502
T KE++ +A+ YL I + IG +
Sbjct: 338 TMQKELENIAKRYLNSPINVTIGDI 362
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A + ++
Sbjct: 187 ETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQKLLNKTH 246
Query: 174 ----VRNTCVFGGAPKREQARDLERGVEIVI 254
+R + GG +QA L +GVEI+I
Sbjct: 247 ELKRIRTLSIVGGRNIDQQAFSLRKGVEIII 277
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I QI++ E++K++ L+ + + I+F+ K+ + + R I +G+ A
Sbjct: 368 SIQQILNFISENKKKS---TLINTLNNKELAVPPIIVFLNQKKMVDIVCREIVSHGFKAT 424
Query: 700 CMHGDKTQQERDEVLYQF 753
+HG K Q+ R+ L F
Sbjct: 425 SLHGGKMQEVRENSLNLF 442
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL D +E L +++VLDEADRMLDMGFE +R I+ RQ +M+SATWP
Sbjct: 248 TPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWP 307
Query: 437 KEVKKLAEDYLG-DYIQINIGSLQL 508
+V KLA++++ + I++ IGS+ L
Sbjct: 308 LDVHKLAQEFMDPNPIKVIIGSVDL 332
Score = 70.1 bits (164), Expect = 5e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTS 170
+TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V + G
Sbjct: 159 KTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPC 218
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+++ CV+GG+ K Q + GV+IVI
Sbjct: 219 GLKSICVYGGSSKGPQISAIRSGVDIVI 246
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/85 (32%), Positives = 53/85 (62%)
Frame = +1
Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
+ +ANH+++QI+++ E ++ +L LL++ +SQ+ + ++F K +AE + R ++
Sbjct: 330 VDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKN--RVLVFALYKVEAERLERFLQ 387
Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
+ GW AV +HG+K Q ER L F
Sbjct: 388 QRGWKAVSIHGNKAQSERTRSLSLF 412
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/88 (44%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGR ID L + NL +R ++V+DEADR+ D+GFEPQ+ +I++ IRPD+Q +++S
Sbjct: 368 ATPGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFS 427
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSLQL 508
AT+P ++K A L D + I + S L
Sbjct: 428 ATFPNKLKSFASKILHDPVYITVNSKSL 455
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF--GHTSY 173
+TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI + F G S
Sbjct: 282 KTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDPS- 340
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+R+ C GG+ + Q D++RGVEIVI
Sbjct: 341 IRSLCCTGGSELKRQINDIKRGVEIVI 367
Score = 33.1 bits (72), Expect = 7.6
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 475 LHSDQYRIITTSA--NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKR 648
LH Y + + + N NI Q V+I E + K + + Q KTI+FV +++
Sbjct: 442 LHDPVYITVNSKSLINENIEQKVEIFSNEEDKFKSLIHWLALTQQNLNDEKTIVFVSSQQ 501
Query: 649 KAENISRNIRRYGWPAVCMHGDKTQQER 732
+ + + G+ +H K ER
Sbjct: 502 ICDILYNRLEANGFTTFAIHAGKIYTER 529
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D LE+G L LVLDEADRMLDMGF+PQ+ +I+ ++ RQTL++SAT
Sbjct: 127 ATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFSATM 186
Query: 434 PKEVKKLAEDYLGDYIQINI 493
EV A +L D +++ +
Sbjct: 187 AGEVADFARAHLRDPVRVEV 206
Score = 64.1 bits (149), Expect = 4e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TG+GKT A++LP I + +P R ALVLAPTRELA QI + FGH VR
Sbjct: 50 TGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERFGHARRVRGA 103
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
+ GG +QA L + EIVI
Sbjct: 104 VIIGGVGMAQQAEALRQKREIVI 126
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
Q V + +HEK L LL+ G S T+IF TKR+A+ I ++I R G +H
Sbjct: 218 QQVFLADQHEKLPLLLTLLERDGDS------TLIFTRTKRRADKIWKHIGRAGHKVARIH 271
Query: 709 GDKTQQERDEVLYQF 753
D++Q +R L F
Sbjct: 272 ADRSQAQRRMALDGF 286
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/85 (42%), Positives = 58/85 (68%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+ PGRL+DF+ + +V+DEAD+M+ FEPQ + +I + + QTLM+SATW
Sbjct: 612 AAPGRLLDFIRNNNIKPESIGIVVIDEADKMVSNDFEPQCKAVISRCPKNIQTLMFSATW 671
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P EV+ +A++YLG+YI++ + S +L
Sbjct: 672 PDEVQFMAQNYLGEYIRVIVNSREL 696
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+ + V+
Sbjct: 531 QTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEILTKNTSVKV 587
Query: 183 TCVFGGA-PKREQARDLERGVEIV 251
+GG +R+Q RD+ G +I+
Sbjct: 588 AVAYGGENNRRQQIRDI-AGADII 610
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGRLID L + L +R T++V+DEADR+ DMGFEPQI +I++ +RPD+Q +++S
Sbjct: 408 ATPGRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFS 467
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSLQL 508
AT+P +++ A L D + + I S L
Sbjct: 468 ATFPNKLRSFAARILTDPLTVTINSNNL 495
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSY-V 176
+TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F +
Sbjct: 322 KTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSI 381
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R C GG+ ++Q DL+RGVEIV+
Sbjct: 382 RTICCTGGSEMKKQINDLKRGVEIVV 407
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/84 (44%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D +EKGT L R +YLV+DEAD ML+MGF Q+ II+ + +R T+++SAT P
Sbjct: 127 TPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLP 186
Query: 437 KEVKKLAEDYL--GDYIQINIGSL 502
++++KL+ Y+ ++I++ L
Sbjct: 187 QDIEKLSRQYMQNPEHIEVKAAGL 210
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT ++ +P + + N + P AL+L PTRELA Q+++ + G ++
Sbjct: 47 QTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELAVQVKEDITNIGRFKRIKA 101
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T VFG + +Q +L++ IV+
Sbjct: 102 TAVFGKSSFDKQKAELKQKSHIVV 125
Score = 37.1 bits (82), Expect = 0.46
Identities = 22/86 (25%), Positives = 45/86 (52%)
Frame = +1
Query: 496 IITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI 675
+ T + H ++Q+ +ENK + LL+++ ++ P + IIF TK ++ +
Sbjct: 210 LTTRNIEHAVIQV-------REENKFS-LLKDVLMTENPDS-CIIFCRTKEHVNQLTDEL 260
Query: 676 RRYGWPAVCMHGDKTQQERDEVLYQF 753
G+P +HG Q++R +V+ +F
Sbjct: 261 DDLGYPCDKIHGGMIQEDRFDVMNEF 286
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL+D + +GT +L Y+VLDEAD MLDMGF P I+KI+ Q +RQT ++SAT P
Sbjct: 128 TPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSATLP 187
Query: 437 KEVKKLAEDYL--GDYIQINIGSLQLPQITTFF 529
EV++L ++ + I I +P+I ++
Sbjct: 188 DEVRELGTKFMKQPEIILIESPERTVPEIEQYY 220
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++ +P + N+ + +G+G ALVL PTRELA Q+ + + ++
Sbjct: 49 QTGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQV 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q R L R EI++
Sbjct: 103 LAIYGGQSIELQLRSLRRNPEIIV 126
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +1
Query: 496 IITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI 675
I+ S + +I + K+ L + I Q P ++IF TKR A+ ++R +
Sbjct: 204 ILIESPERTVPEIEQYYYQVNSRRKIETLCRIIDAQQPP--ISLIFCRTKRNADELARVL 261
Query: 676 RRYGWPAVCMHGDKTQQERDEVLYQF 753
G+ A +HGD +Q+ERD V++ F
Sbjct: 262 TSRGYNADALHGDMSQRERDHVMHGF 287
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 403
L G + +TPGRL+D +G +L+LDEADRMLDMGFEPQIR I++ D
Sbjct: 283 LSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIRMIVQGPDSDM 342
Query: 404 -----RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQTL++SAT+P E+++LA +++ + + +G
Sbjct: 343 PRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVG 378
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGH 164
QTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI A F +
Sbjct: 202 QTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTY 261
Query: 165 TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ VR V+GGA R Q +L RG ++++
Sbjct: 262 HTPVRCVVVYGGADPRHQVHELSRGCKLLV 291
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S NI Q V ++ +K L LL+E G ++FVE KR A+ + R +R
Sbjct: 382 STTENITQDVRWIEDPDKRQALLTLLRE-----NEGKLVLVFVEKKRDADYLERFLRNSE 436
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
V +HGD+ Q+ER+E L F
Sbjct: 437 LACVSIHGDRVQREREEALRLF 458
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 82.6 bits (195), Expect = 9e-15
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++ + ++
Sbjct: 286 QTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LK 344
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ C++GG + Q +DL +G +I+I
Sbjct: 345 SVCIYGGGDRDGQIKDLSKGADIII 369
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G+ +TPGRL D L+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDR
Sbjct: 361 LSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDR 420
Query: 407 QTLMWS 424
QT+M S
Sbjct: 421 QTVMTS 426
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR +D+L +G +L R VLDEAD ML MGFE ++ ++ P RQTL++SAT
Sbjct: 126 ATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATL 185
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P K+LAE Y+ + + IN+
Sbjct: 186 PSWAKRLAERYMKNPVLINV 205
Score = 52.4 bits (120), Expect = 1e-05
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVR 179
+TG+GKTLA+ LP + P RG P ALVL PTRELA Q+ ++ A H V
Sbjct: 46 RTGTGKTLAFALPIAERL--APSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVV- 102
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GG +Q L RG + V+
Sbjct: 103 --AVYGGTGYGKQKEALLRGADAVV 125
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ ++F TK + E I++ + R G A +HGD +Q ER+ VL F
Sbjct: 240 RAMVFTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAF 284
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Frame = +2
Query: 227 LGEGSRNSHS---TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
+ + SR H+ TPGRL D ++G +L+ C LV+DEADRMLDMGFEPQIR+II +
Sbjct: 221 INDASRGCHALIATPGRLKDLTDRGIFSLKYCNKLVIDEADRMLDMGFEPQIREIINNLP 280
Query: 398 --PDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 496
R T M+SAT+PK V LA + ++ +I +G
Sbjct: 281 SVSKRHTSMFSATFPKSVMSLASKLMKPNFGEITVG 316
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQIQQVAA 152
+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL QI VA
Sbjct: 139 ETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQITSVAK 198
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+++R+ V GG R Q D RG +I
Sbjct: 199 TLLKLTHLRSVSVIGGVDARSQINDASRGCHALI 232
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D + G +L + +LVLDEADRMLDMGF +++I + +RQT ++SAT
Sbjct: 216 ATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALFSATM 275
Query: 434 PKEVKKLAEDYLGDYIQINI 493
PKE+ LAE L D +++ +
Sbjct: 276 PKEIASLAERLLRDPVRVEV 295
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q + ++++
Sbjct: 132 QTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHIST 191
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V GG K Q + + G++++I
Sbjct: 192 ALVLGGVSKLSQIKRIAPGIDVLI 215
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I Q+V EK L+ +L + I+F TK A+ + R++ R +
Sbjct: 305 ITQVVHPVPTKEKRRLLSAMLTDADMRS-----VIVFTRTKHGADAVVRHLERDRYDVAA 359
Query: 703 MHGDKTQQERDEVLYQF 753
+HG+K+Q R L F
Sbjct: 360 IHGNKSQNARQRALNGF 376
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D + + + L +LVLDEAD ML+MGF + +I++ ++ DRQTL++SAT P
Sbjct: 131 TPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMP 190
Query: 437 KEVKKLAEDYLGD---YIQINIGSLQLPQITTFF 529
++KKLA +Y+ + +I I SL + +I F+
Sbjct: 191 PQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFY 224
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ INN + P AL+LAPTRELA Q+ + G +
Sbjct: 49 QTGTGKTAAF---GCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSV 105
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG P Q R L+ GV+IV+
Sbjct: 106 LPIYGGQPIDRQIRALKNGVDIVV 129
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 607 EPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
EP A IIF +TK+ + + ++ G+ MHGD +Q R + L +F
Sbjct: 244 EPNA-AIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKF 291
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D E+G + +LV+DEADRMLDMGF P I +I + P +QTL +SAT
Sbjct: 129 ATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLFFSATM 188
Query: 434 PKEVKKLAEDYLGDYIQI 487
P E+ +L + +L D ++I
Sbjct: 189 PPEITRLTKQFLKDPVRI 206
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP I + N R P ALV+APTRELA Q+ + + +
Sbjct: 47 QTGTGKTAAFTLPLIDKLMNGRAKARM--PRALVIAPTRELADQVASSFEKYAKGTKLSW 104
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG +Q + L+RGV+++I
Sbjct: 105 ALLIGGVSFGDQEKKLDRGVDVLI 128
Score = 36.3 bits (80), Expect = 0.81
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQ-EPGAKTIIFVETKRKAENISRNIRRY 684
+ N NI Q++ + + K L I ++Q E G I+F K + + ++++++ +
Sbjct: 213 TTNENITQLMVKVPSSDPKAKRLALRALIEKAQIETG---IVFCNRKTEVDVVAKSLKSH 269
Query: 685 GWPAVCMHGDKTQQERDEVLYQF 753
G+ A +HGD Q +R + L F
Sbjct: 270 GFDAAAIHGDLDQSQRTKTLAAF 292
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/78 (46%), Positives = 55/78 (70%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID L + T +L YLVLDEADRMLDMGF + +II++ +++T ++SAT P
Sbjct: 145 TPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMP 204
Query: 437 KEVKKLAEDYLGDYIQIN 490
KE+ +A ++ +YI ++
Sbjct: 205 KEIVDIARKFMKEYIHVS 222
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + I+ + A+++ PTRELA QI + T V+
Sbjct: 64 QTGTGKTAAFGIPLLERID----FKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKI 119
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T ++GG +Q +DLE+GV+IV+
Sbjct: 120 TTLYGGQSLEKQFKDLEKGVDIVV 143
Score = 39.9 bits (89), Expect = 0.066
Identities = 22/68 (32%), Positives = 41/68 (60%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQE 729
E ++++KL +L + I + P I+F +TK + + IS+ + G+ A +HGD +Q +
Sbjct: 239 EVDEKDKLPLLCRIIDMN--PDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQ 296
Query: 730 RDEVLYQF 753
R+ VL +F
Sbjct: 297 RERVLDKF 304
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ D + K N+ C ++VLDEADRMLD FE +IR I+E RQT+++SAT P
Sbjct: 256 TPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEIRNILEHFTGPRQTMLFSATLP 315
Query: 437 KEVKKLAEDYLGDYIQINIG 496
K++++ + L D + IN+G
Sbjct: 316 KKIQEFTKQTLVDPLVINVG 335
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA----QQIQQVAADFGH 164
+G GKTL ++LPA++ + P+ RG+GP AL+L P+ ELA + +Q F
Sbjct: 163 SGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILTYELAKQYCQKFQK 222
Query: 165 TSYVRNTCV--FGGAPKREQARDLERGVEIVI 254
+ C+ GG Q + + GV IVI
Sbjct: 223 KGFPAIHCLLGIGGMDMSSQLQSIRNGVHIVI 254
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
++E KL+ LL + ++ P +IF E + ++I+ + G V +HG K Q++R
Sbjct: 352 KQEEKLHYLLDCLKKTTPP---VVIFSEHQNDVDDINEYLLIKGVEVVGLHGGKQQEDRT 408
Query: 736 EVLYQF 753
+ L QF
Sbjct: 409 KALKQF 414
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/93 (45%), Positives = 60/93 (64%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G+ TPGR+ D L KGT L+ LVLDEADRMLDMGF +I KI + +
Sbjct: 119 LAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQK 178
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 505
QTL++SAT+P +++ LA+ L D + I + ++Q
Sbjct: 179 QTLLFSATFPPKIESLAKALLKDPLTIKVDTVQ 211
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVR 179
+TGSGKTLA+ +PA++ + + + P +V+ PTRELA+Q+ ++ + + ++
Sbjct: 48 KTGSGKTLAFGIPAVMGTD-----VKSNKPQTIVITPTRELAEQVAMELRKIAAYKANLK 102
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GG P R QA L +G I+I
Sbjct: 103 ILTLYGGVPLRAQADSLAKGAHILI 127
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +1
Query: 553 HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 732
+E +K L IG S +P + +IF TK + +++ +++ G + +HGD Q+ER
Sbjct: 221 YETPDKFKTLNALIG-SYKPDS-LLIFCNTKAEVISLADRLQQRGHSVIDIHGDLDQRER 278
Query: 733 DEVLYQF 753
+E + F
Sbjct: 279 NEAVILF 285
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++ L K + +L LVLDEADRMLDMGF+ +I II+Q RQTL++SAT+P
Sbjct: 130 TPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFSATYP 189
Query: 437 KEVKKLAEDYLGDYIQINIGS 499
K++ +A+ + D ++I + S
Sbjct: 190 KKIATIAKRVMKDPLRIELDS 210
Score = 39.5 bits (88), Expect = 0.087
Identities = 14/43 (32%), Positives = 30/43 (69%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
++F TK++A++I +++ + G+ + +HGD Q++R E L +F
Sbjct: 248 VVFCNTKQEAKDICKDLSKVGFSTLALHGDLEQKDRQENLVRF 290
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYVR 179
+TG+GKT A+ L + + + L+L PTREL +Q+ + D ++
Sbjct: 49 KTGTGKTAAFGLGVLSKL-----VLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIK 103
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ GG P R Q + + G IV+
Sbjct: 104 LLSLGGGMPFRPQMKSVAHGAHIVV 128
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFL---EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 699 TPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISA 758
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P ++ LA+ L I+I +G
Sbjct: 759 TFPNYIQNLAKKLLYKPIEIIVG 781
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ + ++
Sbjct: 614 ETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYCKAVDLKI 673
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ Q L++GVEI++
Sbjct: 674 LAVYGGSNIGAQLNVLKKGVEIIV 697
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N+NI Q V++ +E + KL LL+ +G+ + G +IFV + +A+ + + +Y +
Sbjct: 787 NNNIYQFVEVLEE---KKKLFRLLKLLGEWIKYGL-ILIFVNKQLEADLLYLELFKYEYK 842
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HG + Q +R+ L F
Sbjct: 843 TLVLHGGQDQSDREHTLKSF 862
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII---EQIR 397
L EG+ +TPGRL+D ++G L + TYLV+DEADRML MG E Q+RKI+
Sbjct: 160 LREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTS 219
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQTL+WSAT P+ +++LA + + I I +G
Sbjct: 220 RARQTLLWSATLPESLERLARSAVLNPITIQVG 252
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ ++
Sbjct: 85 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPG 144
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V GG P Q L G ++V+
Sbjct: 145 NPVCGGVPVSTQTIALREGADVVV 168
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D L K +L C YL LDEADR++D+GFE IR++ + + RQTL++SAT
Sbjct: 284 ATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATM 343
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
P +++ A L + +N+G
Sbjct: 344 PTKIQIFARSALVKPVTVNVG 364
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ----IQQVAADFGH 164
TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q ++Q A
Sbjct: 192 TGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVE 251
Query: 165 TSY--VRNTCVFGGAPKREQARDLERGVEIVI 254
Y +R+ GG R Q ++RGV IV+
Sbjct: 252 AGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVV 283
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+AN +++Q V+ ++ E K+ LL+ + ++ P +IF E K ++I + G
Sbjct: 368 AANLDVIQEVEYVKQ---EAKIVYLLECLQKTSPP---VLIFCENKADVDDIHEYLLLKG 421
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
AV +HG K Q++R+ + F
Sbjct: 422 VEAVAIHGGKDQEDREYAISSF 443
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L + +L++ YLVLDEADRMLD+GF I+KI++ DRQTL+++AT
Sbjct: 132 ATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTATA 191
Query: 434 PKEVKKLAEDYLGDYIQINI 493
+ V+ LAE YL + +I +
Sbjct: 192 DESVEVLAEFYLNNPTKIKV 211
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G +R
Sbjct: 49 QTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMR 106
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GG P Q + L+RG +I++
Sbjct: 107 VISVYGGVPVENQIKRLKRGTDILV 131
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/87 (26%), Positives = 47/87 (54%)
Frame = +1
Query: 493 RIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 672
+I T N QI + + K ++L I + + +T++FV TK++ + +++
Sbjct: 208 KIKVTPRNSTAKQIRQFAYQVDYGQKADILSYLITEGK--WGQTLVFVRTKKRVDELTQY 265
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ + G A +HG+K+Q+ER +L +F
Sbjct: 266 LCKEGINAAAIHGEKSQRERVRMLNEF 292
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E+GT +L LVLDEADRMLDMGF + +II++ DRQT+M+SAT
Sbjct: 124 ATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFSATV 183
Query: 434 PKEVKKLAEDYLGD 475
K+++ L+ Y+ +
Sbjct: 184 SKDIQYLSSKYMNN 197
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKTLA+ I I +G+G ALVL PTRELA+Q+Q +F +R
Sbjct: 48 TGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVA 101
Query: 186 CVFGGAPKREQARDLERGVEIV 251
++GG Q R LER +V
Sbjct: 102 PIYGGVAINPQIRQLERADVVV 123
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LL + +S++ G ++F T+ + + +N+R+ A+ +HG TQ +R L +F
Sbjct: 227 LLVHLLKSEKSGL-VMVFCNTRSNVDFVQKNLRKNDIDAIAIHGGHTQAKRKSTLSKF 283
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP--DRQTLMWSA 427
+TPGRL+DF ++G +L +VLDEADRMLDMGF PQ+R+II Q P +RQTL++SA
Sbjct: 141 ATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSA 200
Query: 428 TWPKEVKKLAEDY 466
T+ +V LA+ +
Sbjct: 201 TFTDDVMNLAKQW 213
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIR-RGDG-PIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTG+GKT A+++ I + PP + R G P AL++APTREL QI + AA + +
Sbjct: 54 QTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGL 113
Query: 177 RNTCVFGGAPKREQARDLE-RGVEIVI 254
GG +Q + LE R +I++
Sbjct: 114 NVMSFVGGMDFDKQLKALEARHCDILV 140
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = +2
Query: 209 KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQ---RCTYLVLDEADRMLDMGFEPQIRK 379
K+ L G + +TPGR ID L NL R +++V+DEADR+ D GFEPQI
Sbjct: 367 KKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFEPQIAS 426
Query: 380 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
++ +RPDRQ +++SAT+P +V A +L +QI + +
Sbjct: 427 VLRTVRPDRQCVLFSATFPSKVSNFASRFLDSPLQITVNA 466
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
+TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI + +
Sbjct: 297 KTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDIS 356
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ C GG+ ++Q L+ GVEI I
Sbjct: 357 SICCTGGSDLKKQIDKLKTGVEIAI 381
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N I Q IC + + K + L ++ S+ KTIIFV +++ + I + + Y
Sbjct: 471 NERINQKFTICSDESDKFKELLSLLKVFNSETVDEKTIIFVSSQQICDIIEKRLTDYSEK 530
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+H + ER + L F
Sbjct: 531 LYSIHAGRPYNERRQNLELF 550
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 81.0 bits (191), Expect = 3e-14
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L+KGT +L LV+DEADRMLDMGF I +I RQTL++SATW
Sbjct: 128 ATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATW 187
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQ-LPQITTFF 529
P+ + ++ D + I I S LP I F
Sbjct: 188 PEAIAAISGRVQRDPLAIEIDSTDALPPIEQQF 220
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 547 QEHEKENKLNV-LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQ 723
Q +E +K + LLQ + +P + ++F TK+ + + + G A+ +HGD Q
Sbjct: 219 QFYETSSKGKIPLLQRLLSLHQPSS-CVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQ 277
Query: 724 QERDEVLYQF 753
++RD+ L +F
Sbjct: 278 RDRDQTLVRF 287
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G++ TPGR+ D L++GT +VLDEADRMLD+GF PQI +I+ + +R
Sbjct: 161 LENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNR 220
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQIN 490
QTL+ SAT P V++LAE Y+ + + I+
Sbjct: 221 QTLLLSATLPPVVRRLAESYMHEPVVID 248
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TG+GKT A+ +P + +++ R P A+V+ PTRELA Q+ A
Sbjct: 89 RTGTGKTAAFSIPILEQLDSLEDCR---DPQAIVIVPTRELADQVAAEAERLARGVPTEI 145
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG Q R LE G ++V+
Sbjct: 146 AVLSGGKNMNRQLRQLENGTQLVV 169
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNI-RRYGWPAVCMHGDKTQQERDEVL 744
LL+ + + ++P + IIF TKR + + R + YG +HGD Q+ERD VL
Sbjct: 274 LLESLLKREKP-EQAIIFCRTKRGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVL 328
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID L +G +L YLVLDEAD M++MGF+ +I +I++ +P L+++AT
Sbjct: 26 ATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAEIDEILKSCKPAITKLLFTATM 85
Query: 434 PKEVKKLAEDYL-GDYIQINIGSLQL 508
PK+VK L E+YL D +I I +L
Sbjct: 86 PKDVKLLIEEYLVADASEIRINKEEL 111
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID LE+GT +L LVLDEAD ML MGF + +++ ++ RQ ++SAT P
Sbjct: 141 TPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMP 200
Query: 437 KEVKKLAEDYLGDYIQINIGS 499
+++++A+ YL D I++ I +
Sbjct: 201 PQIRRIAQTYLQDPIEVTIAT 221
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVH-INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYV 176
QTG+GKT A+ LP + + NQ P LVLAPTRELA Q+ + + + S
Sbjct: 60 QTGTGKTAAFALPLLTRTVLNQVK------PQVLVLAPTRELAIQVAEAFQRYAASISGF 113
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R V+GG +Q L+RGV +++
Sbjct: 114 RVLPVYGGQSYGQQLAALKRGVHVIV 139
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQ 750
IIFV TK E ++ ++ G A ++GD Q +R+ ++Q
Sbjct: 258 IIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQ 299
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/89 (40%), Positives = 59/89 (66%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L EG+ +TPGRL+D L G N+ + LVLDEADRMLDMGF P +++I+ ++ D+
Sbjct: 124 LEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDK 183
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINI 493
Q +++SAT+ K +K +A + +++ +
Sbjct: 184 QIMLFSATFEKRIKTIAYKLMDSPVEVEV 212
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ + + +R
Sbjct: 52 QTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRI 108
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
CV+GG Q LE G +I+I
Sbjct: 109 VCVYGGTSIGVQKNKLEEGADILI 132
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL+D L + T NL + + LVLDEAD+ML MGF + I+ I RQ + +SAT P
Sbjct: 128 TPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSATMP 187
Query: 437 KEVKKLAEDYLGDYIQINIGS 499
+V+ LAE Y+ D +QI + S
Sbjct: 188 NQVRTLAEQYMKDPVQIQVQS 208
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKTLA+ILP + +N + P + AL++ PTRELA QI +
Sbjct: 48 QTGTGKTLAFILPILERVNVEKPTIQ-----ALIITPTRELAIQITAETKKLAEVKGINI 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+GG +Q R L+ + I+I
Sbjct: 103 LAAYGGQDVEQQLRKLKGSIHIII 126
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
IIF TKR+A ++ + G+ + +HGD TQ +R++V+ F
Sbjct: 245 IIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAF 287
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR I F+E G L YLVLDEAD ML+MGF + K+++ DR LM+SAT
Sbjct: 127 ATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFSATM 186
Query: 434 PKEVKKLAEDYLGDYIQINIGS 499
P +KK+AE Y+ + I I S
Sbjct: 187 PPRLKKIAESYMHNSITIKAKS 208
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ + F +
Sbjct: 48 QTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEIKSFCKGRGITT 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GGAP +Q R L++GV++V+
Sbjct: 103 VTLYGGAPIMDQKRALKKGVDLVV 126
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
IIF TK + E +S + G+ A +HGD Q+ R+ +L +F
Sbjct: 245 IIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRF 287
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 80.2 bits (189), Expect = 5e-14
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTN---LQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 424
+TPGRL+D +++ L L+LDEADRML +GF Q++KI EQIRPDRQTLM+S
Sbjct: 443 ATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKISEQIRPDRQTLMFS 502
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSLQLPQITT 523
AT+P+ ++ A+ +L + ++I + S Q +T
Sbjct: 503 ATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGST 535
Score = 43.2 bits (97), Expect = 0.007
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN---QPPIRRGD---------------------GPIALVLA 110
QTGSGKTL Y+LPAI +I Q IRR GP+ L++
Sbjct: 334 QTGSGKTLGYLLPAIPNILEHLRQRKIRRQQMTMQEKLENKKKSKLLKNTNMGPMVLIIV 393
Query: 111 PTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 218
PTRELA+Q++ + + ++GG EQ
Sbjct: 394 PTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQ 429
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 79.8 bits (188), Expect = 7e-14
Identities = 39/92 (42%), Positives = 60/92 (65%)
Frame = +2
Query: 236 GSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 415
G+R +TPGRL D++ + +L + LVLDEADRM+DMGF P I++I+ + D+QTL
Sbjct: 146 GARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPRDKQTL 205
Query: 416 MWSATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
+SAT V + +D L + +++ IGS+ P
Sbjct: 206 CFSATMGPAVSGIVQDCLYNAVRVEIGSILKP 237
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKTLA+I+PA+ + + P G L+L PTRELA Q+ V
Sbjct: 72 QTGTGKTLAFIIPALEMLRDTEPC----GVQVLILVPTRELAMQVHGVYEQLKGKKLKSA 127
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V GG +R Q + + G +V+
Sbjct: 128 ALVMGGTSERNQIQSIRSGARVVV 151
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 607 EPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
E KT++F TKR E +++ + R G+ A +HGD++Q +R+ L F
Sbjct: 263 EQEGKTLVFARTKRGTERLAKELIRDGFSAAMIHGDRSQSQRNAALAAF 311
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 79.8 bits (188), Expect = 7e-14
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 439
PGRL+D LE+GT L+ L+LDEAD+M DMGF P +R+I+ RQT+++SAT P
Sbjct: 128 PGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLFSATMPD 187
Query: 440 EVKKLAEDYLGDYIQINIG 496
++ LA + L + I IG
Sbjct: 188 AIRALAREALREPQTIQIG 206
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G + +R+
Sbjct: 46 QTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALGKYTGLRS 101
Query: 183 TCVFGGAPKREQARDLERGVEIVIL 257
++GG + Q + L RGVEI ++
Sbjct: 102 VTLYGGVGYQGQIQRLRRGVEIAVV 126
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID L++ L +LVLDEAD+MLD+GF +RKI + +RQT+++SAT
Sbjct: 200 ATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTMLFSATM 259
Query: 434 PKEVKKLAEDYLGDYIQINI 493
PK++++L+ YL D ++ +
Sbjct: 260 PKQMEELSRAYLTDPARVEV 279
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKT A+ LP A++ +P R G L+LAPTREL QI + F S+
Sbjct: 116 QTGTGKTAAFGLPLLDALMKAGTKPAPRTCRG---LILAPTRELVSQICESLRAFTEGSH 172
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
++ + GG Q + ERG ++++
Sbjct: 173 LKLQVIVGGVAIGPQIKRAERGADLIV 199
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 79.8 bits (188), Expect = 7e-14
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSA 427
+TPGRL+DF ++G +L +VLDEADRMLDMGF PQ+R+II Q + +RQTL++SA
Sbjct: 141 ATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSA 200
Query: 428 TWPKEVKKLAEDYLGD 475
T+ +V LA+ + D
Sbjct: 201 TFTDDVMNLAKQWTVD 216
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-NNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTG+GKT A+++ I + PP R G P AL++APTREL QI + AA + +
Sbjct: 54 QTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGL 113
Query: 177 RNTCVFGGAPKREQARDLE 233
GG +Q + LE
Sbjct: 114 NVMTFVGGMDFDKQLKQLE 132
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 79.8 bits (188), Expect = 7e-14
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = +2
Query: 209 KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNL---QRCTYLVLDEADRMLDMGFEPQIRK 379
K+ L G+ +TPGR ID L L +R T++V+DEADR+ D+GFEPQI +
Sbjct: 372 KKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQ 431
Query: 380 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
I++ +RPD+Q +++SAT+P +++ A L I I I S
Sbjct: 432 IMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINS 471
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHT-SYV 176
+TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F + +
Sbjct: 301 KTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSI 360
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R+ C GG+ ++Q DL+RG EIV+
Sbjct: 361 RSVCCTGGSEMKKQITDLKRGTEIVV 386
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 79.4 bits (187), Expect = 9e-14
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D ++ L +LVLDEADRMLDMGF IRKI+ ++ RQTL +SAT
Sbjct: 145 ATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATM 204
Query: 434 PKEVKKLAEDYLGDYIQINI 493
PK++ +LA+ L D ++ +
Sbjct: 205 PKDIAELADSMLRDPARVAV 224
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++ LP + + + LVL+PTREL+ QI +G + +
Sbjct: 61 QTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSS 120
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T GG P Q R L +GVE+++
Sbjct: 121 TLAIGGVPMGRQVRSLMQGVEVLV 144
Score = 39.9 bits (89), Expect = 0.066
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 607 EPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
EP + ++F TK A+ + + + + G A +HG+K+Q R+ L QF
Sbjct: 257 EPINRALVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQF 305
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + +G +L+ + VLDEADRMLDMGF IRKI+ ++ +Q+L +SAT
Sbjct: 211 ATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFFSATM 270
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P E+ +LA L + +++++
Sbjct: 271 PPEITRLAASILHNPVEVSV 290
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + +N + +L++ PTRELA QI + +G + + +
Sbjct: 127 QTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTS 186
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T +FGG + Q L++G++I+I
Sbjct: 187 TVIFGGVNQNPQTASLQKGIDILI 210
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E+G +L LVLDEADRMLDMGF P +R+I+ + +RQTL++SAT
Sbjct: 194 ATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLFSATL 253
Query: 434 PKEVKKLAEDYLGDYIQINI 493
+E D + D ++ I
Sbjct: 254 DEEAVGEITDLVSDPARVEI 273
Score = 52.8 bits (121), Expect = 9e-06
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Frame = +3
Query: 3 QTGSGKTLAYILPA---IVHINNQPPIRR----------------GDGPIALVLAPTREL 125
QTG+GKT A++LP + HI P+R G GP+ LV+ PTREL
Sbjct: 91 QTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTREL 150
Query: 126 AQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
AQQI +VA T +V T V GG + Q L+ G +I++
Sbjct: 151 AQQIDEVAGKIADVTGHVAVT-VVGGVSYKPQTAALKYGCDILV 193
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 574 NVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
N LL E + + P +TI+F+ TK +A++ R + R G A +HG+++Q +R+ L F
Sbjct: 296 NNLLPEFLKKEGP-ERTIVFMRTKHRADSCCRRLERKGIKAAAIHGNRSQAQRERALSAF 354
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 79.4 bits (187), Expect = 9e-14
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 170
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
++ V GGA + +Q L GVE+VI
Sbjct: 406 GIKTVSVIGGASREDQGMKLRMGVEVVI 433
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 26/112 (23%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---------- 403
+TPGRL+D LE L +CTY++LDEADRMLDMGFEP ++K++E + PD
Sbjct: 434 ATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEF 492
Query: 404 ----------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
RQT+M++AT +++LA YL ++IGS P
Sbjct: 493 DNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKP 544
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
Q+V + E K KL +L+ Q Q P IIFV K+ A+ +S+ + + G+ +H
Sbjct: 550 QVVYMVPEDRKRKKLVEVLES--QFQPP---IIIFVNQKKGADMLSKGLTKLGFKPTVLH 604
Query: 709 GDKTQQERDEVL 744
G K Q +R+ L
Sbjct: 605 GGKGQDQREYAL 616
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A + +
Sbjct: 768 ETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEI 827
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ Q + L++GVEI++
Sbjct: 828 LAVYGGSNIARQLKVLKKGVEILV 851
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL R +++VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 853 TPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISA 912
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P ++ +A+ L I+I +G
Sbjct: 913 TFPNYIQNMAKKLLYKPIEIIVG 935
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
N+NI Q V+I +E +K +L L+ +G+ + G +IFV + +A+ + + +Y +
Sbjct: 941 NNNIYQFVEIIEESKKVFRL---LKLLGEWIKYGL-VLIFVNKQIEADLLYLELYKYDYN 996
Query: 694 AVCMHGDKTQQERDEVLYQF 753
+ +HG + Q +R L +F
Sbjct: 997 LLVLHGGQDQTDRQFTLEKF 1016
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/86 (38%), Positives = 58/86 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D+++ G +L + +VLDEAD M+DMGF +++I+++ + ++Q +++SAT
Sbjct: 131 ATPGRLLDYIKSGKLSLSQVDTVVLDEADLMVDMGFIDDVKEILKRTKEEKQVMLFSATM 190
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLP 511
PK + L ED++G + I S P
Sbjct: 191 PKAIMNLVEDFMGKFELIQTESFAKP 216
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ + I I L+L PTREL+ Q+ + F + +
Sbjct: 46 QTGTGKTAAFGVSIINKILKNKKNNAKSSLTTLILVPTRELSVQVNENIKLFSSNLPITS 105
Query: 183 TCVFGGAPKREQARDL-ERGVEIVI 254
++GG RE + +RG++I++
Sbjct: 106 LAIYGGMRNRESHFSIFKRGLDIIV 130
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +1
Query: 487 QYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENIS 666
++ +I T + LQ ++ +K LLQ++ +E I+FV+TKR A+N+
Sbjct: 204 KFELIQTESFAKPLQNIEHLAYFYTSSKPVELLQQM-LKEEKIYSAIVFVKTKRDADNVE 262
Query: 667 RNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ + +HGDKTQ R +L F
Sbjct: 263 NLLSKMKLKIDSLHGDKTQASRSRILRSF 291
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E G N + VLDEAD MLDMGF ++ II ++ RQTL++SAT
Sbjct: 131 ATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATM 190
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P E++ LAE L D +I I
Sbjct: 191 PAEIEILAEAILTDPTKIQI 210
Score = 56.4 bits (130), Expect = 7e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP I + +L+L PTRELA QI Q D+ ++
Sbjct: 47 QTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKT 106
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG ++ Q +E G++I++
Sbjct: 107 KVVYGGVGRQAQVDSIELGLDILV 130
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
+K NK+ +L + ++ K +IF +TK A+ I + + + A +H KTQ R+
Sbjct: 228 DKSNKVPLLFNILTKADYE--KVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVRE 285
Query: 736 EVLYQF 753
E L F
Sbjct: 286 EALQNF 291
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D E+G +L L LDEADRMLDMGF P I I+E++ +QTL++SAT+P
Sbjct: 129 TPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFSATFP 188
Query: 437 KEVKKLAEDYLG--DYIQINIGSLQLPQITTF 526
+E+ A +++ D++ N L +P I +
Sbjct: 189 QEIIDAAHEFMNEPDFVLTNAEELDIPPIDLY 220
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+ LP + ++ ALVLAPTRELA Q+ Q + +
Sbjct: 50 RTGSGKTAAFGLPILERCQPSGKLQ------ALVLAPTRELANQVAQEFELLQGNAGLSI 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG +QA+ L +GV+I++
Sbjct: 104 VTVYGGTDLEKQAKTLAKGVDIIV 127
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G + +TPGRL+D +++G +L + VLDEADRMLDMGF P ++ I+ ++ R
Sbjct: 116 LKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQR 175
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINI 493
QT+ ++AT P +V +LA L + ++I +
Sbjct: 176 QTIFFTATMPPKVAQLASGLLNNPVRIEV 204
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G R
Sbjct: 41 QTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRL 100
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T +FGG + Q R L+RGV + I
Sbjct: 101 TTIFGGVGQNPQVRALKRGVHVAI 124
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LL+ Q++ G +T++F +TK A+ +++ + G +HG+KTQ +R+ L F
Sbjct: 229 LLEHSLQAEGVG-RTLVFTKTKHGADRLAKELNASGIRTDAIHGNKTQNKRNRALESF 285
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +++ NL LVLDEAD+MLD+GF +R+I + + +RQTL +SAT
Sbjct: 131 ATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQTLFFSATM 190
Query: 434 PKEVKKLAEDYLGDYIQINI 493
PK +K+L Y + +Q+++
Sbjct: 191 PKAIKELVSGYCNNPVQVSV 210
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A++LP+I + LVLAPTREL QI A D+G + ++
Sbjct: 47 QTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKV 106
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG + L RG +I+I
Sbjct: 107 QSIVGGTSVNKDRNKLHRGTDILI 130
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGA--KTIIFVETKRKAENISRNIRRYGWPAVC 702
Q + + Q+ EK++ L ++L G+ + PG + +IF TK A+ + + + R G PA
Sbjct: 222 QYLFMVQQDEKQSLLELILS--GRHKVPGEFERILIFTRTKHGADRVVKKLSRAGIPANA 279
Query: 703 MHGDKTQQERDEVLYQF 753
+HG+K+Q +R L +F
Sbjct: 280 IHGNKSQPQRQRALDEF 296
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 79.0 bits (186), Expect = 1e-13
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 7/100 (7%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-------RPDRQT 412
+TPGRL DFLE+ +L+ +VLDEAD+MLDMGFEPQIR ++ + +RQT
Sbjct: 103 ATPGRLKDFLERRCLSLKYVRVMVLDEADKMLDMGFEPQIRDLVYKFDMPGNGPNGNRQT 162
Query: 413 LMWSATWPKEVKKLAEDYLGDYIQINIGSLQLPQITTFFK 532
LM+SAT+ V+ +A+ YL + +I++G Q+ TT K
Sbjct: 163 LMFSATFGTGVQAMAKRYLHNEARIHVG--QIGSTTTMIK 200
Score = 47.2 bits (107), Expect = 4e-04
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN---QPPIRRGDG--------PIALVLAPTRELAQQIQQVA 149
QTGSGKT +++ P I + + + I D P+A++L+PTREL QQI +
Sbjct: 8 QTGSGKTFSFLSPIIAQLISSRAKDAISDDDKNMEQSMSFPLAVILSPTRELTQQIAFMC 67
Query: 150 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ + V+GG REQ L++G +IVI
Sbjct: 68 YQLTFKTNLIVRLVYGGEGAREQRGLLKKGCDIVI 102
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +1
Query: 472 RLHSDQYRIITTSANHNILQIVD--ICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETK 645
R+H Q TT + I ++ +KL +L+ G T+IFVETK
Sbjct: 186 RIHVGQIGSTTTMIKQQFEYFAETAIKSVDKRIDKLIHILKSPGSIPTASFLTLIFVETK 245
Query: 646 RKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ I + G MHGD Q+ER L F
Sbjct: 246 KDIGYIITKLLNAGLRVCEMHGDLEQRERQNNLKSF 281
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +2
Query: 224 GLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 403
GL G++ TPGR+ID LE+ T +L R +LVLDEAD ML MGF + +I+ +
Sbjct: 128 GLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEY 187
Query: 404 RQTLMWSATWPKEVKKLAEDYLGDYIQI 487
+Q ++SAT P ++KL+ YL D ++
Sbjct: 188 KQVALFSATMPPAIRKLSAKYLHDPFEV 215
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
QTG+GKT A+ +P + I+ + P ALVL PTRELA Q+ + +G + S +
Sbjct: 58 QTGTGKTAAFAIPMLSKIDITSKV-----PQALVLVPTRELALQVAEAFGRYGAYLSQLN 112
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GG+ Q L RG ++V+
Sbjct: 113 VLPIYGGSSYAVQLAGLRRGAQVVV 137
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ TPGR++D LE+ +L T LVLDEADRML+MGF+ + I++ I R
Sbjct: 137 LEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVKHIPKTR 196
Query: 407 QTLMWSATWPKEVKKLAE 460
QTL++SAT+PK + LAE
Sbjct: 197 QTLLFSATYPKNIAALAE 214
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY-VRN 182
TGSGKT A+ L + + + P ALVL PTRELA Q+ + ++
Sbjct: 67 TGSGKTTAFALTLLAKLE-----AKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKI 121
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG P R Q LE G +++
Sbjct: 122 LTLCGGEPSRIQTNSLEHGAHVLV 145
Score = 37.1 bits (82), Expect = 0.46
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
QI + E+ +++ +G Q ++F TK + ++I +R + + +H
Sbjct: 233 QIEQLFYAMNNEDSAQLVMNLLGDHQPENC--LVFCNTKNEVKDIFNTLRANKFSVLALH 290
Query: 709 GDKTQQERDEVLYQF 753
G+ Q++RD+ + QF
Sbjct: 291 GELEQKDRDQAIIQF 305
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/80 (45%), Positives = 58/80 (72%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + K +L+ LVLDEADRMLD+GF ++ I++Q + QTL++SAT+
Sbjct: 131 ATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATF 190
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P +VK+L E+ L + ++I++
Sbjct: 191 PDKVKELTEELLRNPVEISV 210
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT--SYV 176
+TGSGKT ++LP + +++ P + ALVL PTRELA Q+ Q + +
Sbjct: 46 ETGSGKTAGFVLPLLEKLHSIPA-PGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKI 104
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R+ ++GGA Q + L +G +IV+
Sbjct: 105 RSVAIYGGAAINPQMQSLSKGCDIVV 130
Score = 40.3 bits (90), Expect = 0.050
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 565 NKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 744
N +LL+ + + QE + +IFV +KR A NI + R G + +HGD TQ+ER L
Sbjct: 230 NNRTMLLKHLIK-QEKWQQLLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGAL 288
Query: 745 YQF 753
F
Sbjct: 289 EDF 291
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D LE + + LVLDEADR+LD+GF ++ +I+E + P RQ L +SAT+
Sbjct: 135 ATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLFFSATF 194
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P ++ LAE L D ++I +
Sbjct: 195 PPAIEVLAESMLHDPLRIEV 214
Score = 52.8 bits (121), Expect = 9e-06
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYV 176
QTGSGKT A+ LP + + N P L+L PTRELA Q+ + A F V
Sbjct: 50 QTGSGKTAAFALPMLQQLAN-APTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRV 108
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ VFGG Q +L G +IV+
Sbjct: 109 KVAVVFGGVSINPQMMNLRGGADIVV 134
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LL+ + Q+ E + ++FV TK AE ++ +R+ A HG+ +Q +R +VL F
Sbjct: 239 LLRHLVQT-EKWERALVFVATKHAAEIVADKLRKVHIEAEPFHGELSQGKRTQVLQDF 295
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP----------- 400
+TPGRL+DF+++G ++V DE DRMLDMGFEPQIR I+ ++ P
Sbjct: 276 ATPGRLLDFIKQGVVETTYVRFVVFDECDRMLDMGFEPQIRDILHELPPIHHSVQDPSNP 335
Query: 401 ------DRQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSL 502
+RQTL++SAT+PKE+K LA ++L + I +G +
Sbjct: 336 DITHQIERQTLLFSATFPKEIKNLAMEFLRQDRLVSITVGQI 377
Score = 38.3 bits (85), Expect = 0.20
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQP-------PIRRGDG------------PIALVLAPTREL 125
QTGSGKT A+I+P + I + P D P ++++PTREL
Sbjct: 173 QTGSGKTCAFIIPILHRIATEKLKLYTMSPGHHEDRDFRFNAKGSRAYPFCIIMSPTREL 232
Query: 126 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
QQ + + + + + +GG P Q L+ G +I++
Sbjct: 233 VQQTAKASWMLSYGTSILTRVAYGGDPSGPQRDALQMGCDILV 275
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+TI+F K +A+ I R + +HGD TQ+ER+ L F
Sbjct: 471 QTIVFTNFKSEADRIFRYFDDMRYRVAVIHGDMTQKERENNLKYF 515
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR--QTLMWSATW 433
PGRL DFL+ G ++LV DEADR+LDMGF+ Q+ I+ R QT+MWSATW
Sbjct: 244 PGRLKDFLQNGDVIFDEVSFLVFDEADRLLDMGFKVQLDDILGYFSSHRPAQTMMWSATW 303
Query: 434 PKEVKKLAEDYL 469
P V++LA++YL
Sbjct: 304 PPVVEQLAQEYL 315
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKT+A+ +PA+ P P +VLAPTREL QQ +V + VR
Sbjct: 164 TGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKVFHQLS-SGKVRVC 218
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
+GGAP+ QAR L G ++++
Sbjct: 219 EAYGGAPREAQARRLHNGCDVLV 241
Score = 36.3 bits (80), Expect = 0.81
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNI-RRYGW 690
N NI Q + E+ K V L + G+ E AK +IFVE + EN + + R G
Sbjct: 334 NENIKQHIFFADAPEERVKTLVSLIKEGKIDENTAKMMIFVERQTDTENAAYALARMLGI 393
Query: 691 PAVC---MHGDKTQQERDEVL 744
+ C +HG Q++RD ++
Sbjct: 394 HSRCIGVVHGGMQQRQRDHIM 414
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L T+L + LVLDEADRMLDMGF P I++I++++ +RQTL++SAT+
Sbjct: 133 ATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSATF 192
Query: 434 PKEVKKLAEDYLGDYIQINIGS 499
VK LA + + +++ + +
Sbjct: 193 ETRVKALAYRLMKEPVEVQVAA 214
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+ + + +
Sbjct: 48 QTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELA 107
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GG R Q L +GV+I+I
Sbjct: 108 IVTVYGGTSIRVQQEQLAKGVDILI 132
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSA 427
+TPGRLIDF K N C LV+DEADRMLDMGF P +R+I+ + + DRQTLM+SA
Sbjct: 225 ATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSA 284
Query: 428 TWPKEVKKLAEDYLGD 475
T +V L+ + D
Sbjct: 285 TISSDVNNLSAQWCVD 300
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
TG+GKT +++ + + G P AL+LAPTREL QI + A G + V
Sbjct: 140 TGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNA 199
Query: 183 TCVFGGAPKREQARDLERG-VEIVI 254
V+GGA +Q L+RG +IV+
Sbjct: 200 DAVYGGAEYEKQMELLKRGKTDIVV 224
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +G L + + LV+DEADRMLDMGF P I KI+ + RQTL +SAT
Sbjct: 418 ATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLFFSATM 477
Query: 434 PKEVKKLAEDYLGDYIQINI 493
E+++LA+ +L ++I +
Sbjct: 478 APEIRRLADAFLRHPVEITV 497
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++ LP + + R P +L+L PTRELA Q+ + +G + +
Sbjct: 336 QTGTGKTASFTLPMLQKLAGSRA--RARMPRSLILEPTRELALQVAENFKLYGKYLRLTH 393
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG EQ L RGV+++I
Sbjct: 394 ALLIGGESMAEQRDVLNRGVDVLI 417
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/85 (38%), Positives = 59/85 (69%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR+I+ + G L L+LDEAD+MLD+GF ++++++E + RQ L++SAT
Sbjct: 132 ATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPKKRQNLLFSATL 191
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
P++V++LAE++L +++ I Q+
Sbjct: 192 PQKVQQLAEEFLNAAVELRISRDQI 216
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY--V 176
QTG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ ++ S +
Sbjct: 46 QTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPI 105
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ + GG Q R L G++++I
Sbjct: 106 KTATLIGGENIDGQIRKLRMGLDVLI 131
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 622 TIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
TIIFV +KR A N++ +++ G A HGD TQ ER +VL +F
Sbjct: 249 TIIFVSSKRSAFNLANKLKKAGIQAQDFHGDLTQDERIKVLKRF 292
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID L +GT ++ + YLV+DEAD MLDMGF + I+ + ++Q LM+SAT P
Sbjct: 128 TPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFSATMP 187
Query: 437 KEVKKLAEDYLGDY 478
+ + LA ++G++
Sbjct: 188 QRIVTLARKHMGNF 201
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P I ++ + + ALVL PTRELA Q+ +
Sbjct: 48 QTGTGKTAAFGIPLIERLDE-----KANDVQALVLTPTRELALQVCNEIDSLKGNKRLNL 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG Q R L+R V++V+
Sbjct: 103 LPVYGGVSIGNQIRALKRRVDLVV 126
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSATW 433
PGRL DFL+ G +++ ++LV DEADR+LDMGF+ + +I+ + QT+MWSATW
Sbjct: 219 PGRLKDFLDGGDVSIRNLSFLVFDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSATW 278
Query: 434 PKEVKKLAEDYLGD 475
P+ V+ +A YL D
Sbjct: 279 PESVQAMARKYLSD 292
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G VR
Sbjct: 139 TGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG-CGQVRV 192
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+GGAP+ QAR L G + ++
Sbjct: 193 CEAYGGAPRDLQARHLRNGCDALV 216
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/93 (43%), Positives = 58/93 (62%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID +E + L YLVLDEAD+ML +GFE + I+E + RQ++++SAT P
Sbjct: 235 TPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMP 294
Query: 437 KEVKKLAEDYLGDYIQINIGSLQLPQITTFFKL 535
VKKLA YL + + I++ Q ++ KL
Sbjct: 295 TWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKL 327
Score = 57.2 bits (132), Expect = 4e-07
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQP----PIRR-GDGPIALVLAPTRELAQQIQQVAADFGHT 167
+TG+GKTLA+ +P I + + RR G P LVLAPTRELA+Q+++ +
Sbjct: 147 KTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SA 204
Query: 168 SYVRNTCVFGGAPKREQARDLERGVEIVI 254
Y+ CV+GG Q L RGV++V+
Sbjct: 205 PYLSTVCVYGGVSYTIQQSALTRGVDVVV 233
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 613 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
G KTI+F +TKR A+ +S + +HGD +Q +R+ L F
Sbjct: 351 GGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAF 396
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D + +GT + T LVLDEAD ML MGF + I+EQ+ +RQ +++SAT P
Sbjct: 197 TPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMP 256
Query: 437 KEVKKLAEDYLGDYIQINI 493
E+++L++ YL D ++ I
Sbjct: 257 PEIRRLSKRYLNDPAEVTI 275
Score = 53.6 bits (123), Expect = 5e-06
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ--VAADFGHTSYV 176
QTG+GKT A+ LP + + + P LVLAPTRELA Q+ A GH ++
Sbjct: 116 QTGTGKTAAFALPLLERLESGQKT-----PQVLVLAPTRELAMQVADSFKAYAAGH-PHL 169
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ V+GG R Q L RGV++V+
Sbjct: 170 KVLAVYGGTDFRSQISTLRRGVDVVV 195
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL+D L +LVLDEADRMLDMGF P IR+I++ I RQTL +SAT P
Sbjct: 127 TPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFSATMP 186
Query: 437 KEVKKLAEDYLGDYIQINIGSLQLP 511
+ LA + L + +NI + P
Sbjct: 187 APIGVLAREMLRNPATVNINRIAAP 211
Score = 56.4 bits (130), Expect = 7e-07
Identities = 34/83 (40%), Positives = 47/83 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKT A++LP + + ++P RG ALV+ PTRELA QI + D + +
Sbjct: 47 TGSGKTAAFLLPILHQLIDRP---RGTTR-ALVITPTRELAAQILEDLNDLAVHTPISAA 102
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
VFGG R Q RGV+++I
Sbjct: 103 AVFGGVSIRPQEHAFRRGVDVLI 125
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/72 (48%), Positives = 54/72 (75%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +++ + NL + LVLDEADRMLDMGF P +++II + RQ L++SAT+
Sbjct: 152 ATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATF 211
Query: 434 PKEVKKLAEDYL 469
E++KLA+ ++
Sbjct: 212 SPEIQKLAKSFM 223
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGH 164
QTG+GKT + LP + + N P R P+ AL+L PTRELA Q+ +
Sbjct: 65 QTGTGKTAGFSLPILNRLMPLATENTSPARH---PVRALILTPTRELADQVAANVHTYAK 121
Query: 165 TSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ +R+T V+GG Q + L RGVE+VI
Sbjct: 122 FTPLRSTVVYGGVDINPQIQTLRRGVELVI 151
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 SANHNILQIV-DICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY 684
+ + NI Q++ + E +K + L+Q SQ I+F TK ++R++ +
Sbjct: 236 ATSENIKQVIFALDSEEDKRMAVCHLIQSKALSQ-----VIVFSNTKLGTARLARHLEKE 290
Query: 685 GWPAVCMHGDKTQQERDEVLYQF 753
G + +HGDKTQ ER + L F
Sbjct: 291 GVSSTAIHGDKTQIERTKSLEAF 313
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/91 (40%), Positives = 57/91 (62%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G TPGR+ D + GT + + +LVLDEADRMLDMGF Q+ +I++ + +R
Sbjct: 118 LNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKER 177
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
TL++SAT P E+ + + Y+ + + I I S
Sbjct: 178 ITLLFSATMPPEIHNICKRYMNNPVTIEIES 208
Score = 36.3 bits (80), Expect = 0.81
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT + + +I+ + N GP L+L P RELA Q+ +
Sbjct: 48 KTGSGKTAVFGV-SILQLTNPEEA----GPQGLILTPARELAVQVDNDIRKMAKYLKHKT 102
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
T ++G + + L +GV IV
Sbjct: 103 TAIYGQHNINLETQILNKGVSIV 125
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/89 (38%), Positives = 58/89 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D + + T L+ +Y+VLDEAD ML+MGF + +I++ + +++ L++SAT P
Sbjct: 128 TPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLFSATLP 187
Query: 437 KEVKKLAEDYLGDYIQINIGSLQLPQITT 523
+ KLA++Y+ +Y I + QL T
Sbjct: 188 DSIMKLAKNYMREYDIIKVKRQQLTTTLT 216
Score = 50.0 bits (114), Expect = 6e-05
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + I+ + AL+LAPTRELA Q+ + + +
Sbjct: 48 QTGTGKTAAFGIPILETIDESSRNTQ-----ALILAPTRELAIQVAEEIDSIKGSKRLNV 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG Q R+L RGV+IV+
Sbjct: 103 FPVYGGQSIDRQIRELRRGVQIVV 126
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+IF +TK + +S + G+ A +HGD TQ +R++ L +F
Sbjct: 245 LIFCKTKADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKF 287
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++ F H
Sbjct: 358 ETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLG 417
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
R T + GG EQ + +G EIVI
Sbjct: 418 FRVTSIVGGQSIEEQGLKITQGCEIVI 444
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 17/99 (17%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD----- 403
+TPGRLID LE+ L +C Y+VLDEADRM+DMGFEPQ+ +++ ++P+
Sbjct: 445 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEE 504
Query: 404 -------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
R T M+SAT P V++LA YL + + + IG+
Sbjct: 505 LDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGT 543
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I Q V + +E EK +L LL E+G+ I+FV TK+ ++I++N+ + G+
Sbjct: 551 ISQHVIMMKESEKFFRLQKLLDELGEKT-----AIVFVNTKKNCDSIAKNLDKAGYRVTT 605
Query: 703 MHGDKTQQERDEVLYQF 753
+HG K+Q++R+ L F
Sbjct: 606 LHGGKSQEQREISLEGF 622
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/80 (45%), Positives = 55/80 (68%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID ++ G+ ++ + VLDEADRMLDMGF IR ++ + + +QTL++SAT
Sbjct: 127 ATPGRLIDMIKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATL 186
Query: 434 PKEVKKLAEDYLGDYIQINI 493
EV +LA +L + ++I I
Sbjct: 187 SVEVMRLAYRFLNEPVEIQI 206
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 176
QTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A H+ +
Sbjct: 46 QTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGI 100
Query: 177 RNTCVFGGAPKREQARDLE 233
R+ + GG + Q +DLE
Sbjct: 101 RSVPIIGGTDYKSQNKDLE 119
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +2
Query: 212 RASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 391
R + L G+ +TPGRL D +++G L + + VLDEAD+M DMGF PQ+ +++Q
Sbjct: 182 RQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEADQMADMGFMPQVTALLDQ 241
Query: 392 IRPDRQTLMWSATWPKEVKKLAEDYLGD 475
+RP+ Q +++SAT + V L YL D
Sbjct: 242 VRPEGQRMLFSATLDRNVDLLVRRYLSD 269
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+ L + + R P+ LVL PTRELAQQ+ + + +R
Sbjct: 114 RTGSGKTLAFGLALLARTAGRRAEPRQ--PLGLVLVPTRELAQQVTDALTPYARSVKLRL 171
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V GG QA L G E+V+
Sbjct: 172 ATVVGGMSIGRQASALRGGAEVVV 195
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ I+F++TK + ++R++ G A +HG K+Q +R L QF
Sbjct: 310 RVIMFLDTKHAVDRLTRDLLNSGVRAAALHGGKSQPQRTRTLAQF 354
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ +TPGRL+D + +G L + VLDEADRMLDMGF P +++II Q+ R
Sbjct: 122 LKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQR 181
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINI 493
Q+L +SAT ++ +LA L + +N+
Sbjct: 182 QSLFFSATLAPKITELAHSLLSKPVTVNV 210
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A LP + + P+ALVLAPTRELA QI +G +R+
Sbjct: 47 QTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRS 106
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG + Q + L+RG I++
Sbjct: 107 VLIYGGVGQGNQVKALKRGAHILV 130
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LLQ+I E + ++F +TKR A +S+ + R G+ A +HG+K+Q R + L F
Sbjct: 235 LLQKILGGDEV-ERALVFTKTKRTANTLSQRLVRSGFKATAIHGNKSQGARQQALEAF 291
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 77.4 bits (182), Expect = 4e-13
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ--IRP--DRQTLMWS 424
TPGRL DF++KG + + +LDEADRMLDMGF I I + + P R TLM+S
Sbjct: 543 TPGRLKDFVDKGFIDFSNVQFFILDEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFS 602
Query: 425 ATWPKEVKKLAEDYLGDYIQINIGSL 502
AT+P +V+K+A YL DY+ + G++
Sbjct: 603 ATFPDDVQKIAGKYLHDYVFVTTGNI 628
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 6 TGSGKTLAYILPAI-VHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
TGSGKT A+++P + + + Q P P ++++PTRELA QI + A F H S
Sbjct: 455 TGSGKTAAFLVPVVNILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREARKFSHNSV 514
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+++ V+GG Q L G I++
Sbjct: 515 LKSVIVYGGTQVSHQKSSLMNGCNILV 541
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = +1
Query: 538 DICQE-HE-----KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
D+CQE HE K NKL +L+++G S + I+FVE+K+ A+ I+ + + A
Sbjct: 634 DVCQEFHEVQRQDKRNKLVEILRDLGNS-----RVIVFVESKKTADFIAAFLANTQFQAT 688
Query: 700 CMHGDKTQQERDEVLYQF 753
+HGD+ Q +R++ L +F
Sbjct: 689 SIHGDRLQSQREQALREF 706
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID + +GT L+ +VLDEAD ML+MGF I I+ + +RQTL++SAT P
Sbjct: 127 TPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMP 186
Query: 437 KEVKKLAEDYLG--DYIQINIGSLQLPQITTFF 529
++++AE ++ + +++ + +P I ++
Sbjct: 187 DPIRRIAERFMNEPELVKVKAKEMTVPNIQQYY 219
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + +N + ALV+APTRELA Q+ + G VR
Sbjct: 47 QTGTGKTAAFGIPIVEKVNV-----KNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q R L++ +++
Sbjct: 102 LPIYGGQDIERQIRALKKHPHVIV 125
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +1
Query: 553 HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 732
HEK+ K ++L + + Q P I+F TKR+ + ++ + G+ A +HGD +Q +R
Sbjct: 223 HEKK-KFDILTRLL-DIQAPEL-AIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKR 279
Query: 733 DEVLYQF 753
VL +F
Sbjct: 280 LSVLRKF 286
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID L +G+ + R VLDE DRMLDMG + Q+ +I + + RQ LM+SAT P
Sbjct: 126 TPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMP 185
Query: 437 KEVKKLAEDYLGDYIQINIGS 499
K + +++ YL + ++I +G+
Sbjct: 186 KHIIAVSQKYLNNPVRITVGA 206
Score = 50.4 bits (115), Expect = 5e-05
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTGSGKTLAY+LP I I N+ AL+L PTRELA QI TSY
Sbjct: 48 QTGSGKTLAYLLPLIDSFIKNKTT--------ALILVPTRELATQIHSTLNKV-TTSYKI 98
Query: 180 NTCV-FGGAPKREQARDLERGVEIVI 254
N+ V GG P +Q L++ +++I
Sbjct: 99 NSAVLIGGEPMPKQFIQLKKNPKVII 124
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/87 (26%), Positives = 44/87 (50%)
Frame = +1
Query: 493 RIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 672
RI + N +I + K + L +++G + IIFV+TKR A+ +++
Sbjct: 201 RITVGATNKAAAEIKQESMHVSDKEKFSALTKQLGNRE---GSVIIFVKTKRSADQLAKM 257
Query: 673 IRRYGWPAVCMHGDKTQQERDEVLYQF 753
++ A +HGD +Q++R+ V+ F
Sbjct: 258 LKYENHTAEAIHGDLSQRQRERVILSF 284
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/95 (43%), Positives = 54/95 (56%)
Frame = +2
Query: 224 GLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 403
GL G+R TPGRL+D + +G+ L + LVLDEAD ML MGF I I+ Q D
Sbjct: 169 GLRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKD 228
Query: 404 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
RQT+++SAT V +A YL I+I Q+
Sbjct: 229 RQTMLFSATLSSRVMSIANRYLHSPESISISPKQM 263
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + +I+ + ALVLAPTRELAQQ+ A +
Sbjct: 100 QTGTGKTAAFGLPLLNNIDFSKKCVQ-----ALVLAPTRELAQQVGDALATYSGDDGRNV 154
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG+ + Q L RG +V+
Sbjct: 155 LVVYGGSSYQAQVGGLRRGARVVV 178
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D + +GT + LVLDEAD ML+MGF I II+Q+ ++Q +++SAT P
Sbjct: 178 TPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMP 237
Query: 437 KEVKKLAEDYLGDYIQINIGSLQ 505
E++ +A+ YL D +I I S++
Sbjct: 238 NEIRNIAKKYLNDPAEILIKSVK 260
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTSYVR 179
QTG+GKT A+ LP I + + + LV+ PTRELA Q+ + + ++ +
Sbjct: 96 QTGTGKTAAFALPLIEKLADNKELNAK----VLVMTPTRELATQVAESFKSYSSESTNFK 151
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GG R Q L+R V++V+
Sbjct: 152 TIAIYGGTDYRNQIYALKRKVDVVV 176
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 77.0 bits (181), Expect = 5e-13
Identities = 34/80 (42%), Positives = 57/80 (71%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +E+ +L+ +L+LDEADRMLDMGF + KI+ + DRQ++M+SAT
Sbjct: 133 ATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQSMMFSATM 192
Query: 434 PKEVKKLAEDYLGDYIQINI 493
PK ++ L++ L + ++++
Sbjct: 193 PKPIEDLSKKILTNPQKVSV 212
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKT A+ LP + H + +P R AL+L+PTRELA QI + AD +
Sbjct: 49 QTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIADLSEGTP 105
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+ + VFGG R Q + L RGV+I++
Sbjct: 106 ISHCVVFGGVSVRPQIQALARGVDILV 132
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 601 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
S+ + ++F TK A ++ ++ + G A+ +HG+K+Q R + L F
Sbjct: 243 SKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAF 293
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/108 (37%), Positives = 62/108 (57%)
Frame = +2
Query: 188 CVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 367
C+ +R + L G TPGRL D L +G NL R +VLDEAD MLD+GF
Sbjct: 151 CIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGFRD 210
Query: 368 QIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
++ +I++ +R+TL++SAT +E+ LA+ Y + ++I+ S P
Sbjct: 211 ELEEILDATPAERRTLLFSATIAREIAALAKRYQTNALRIDTVSRNKP 258
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTGSGKT+AY L A + + + P+AL++APTRELA Q+QQ + R
Sbjct: 88 QTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWLYGPAGAR 147
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
GG R +A+ LERG IV+
Sbjct: 148 VVSCIGGMDARREAQALERGCHIVV 172
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID LEKG+ +L R +VLDEAD ML MGF + I+++ RQT ++SAT P
Sbjct: 133 TPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFSATMP 192
Query: 437 KEVKKLAEDYLGD 475
+K++A YL D
Sbjct: 193 SAIKRIATTYLRD 205
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
QTG+GKT ++ LP + I+ + P ALVLAPTRELA Q+ + + +
Sbjct: 52 QTGTGKTASFALPILARIDIKQTT-----PQALVLAPTRELAIQVAEAFQRYATYIPGFH 106
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GG Q L RGV +V+
Sbjct: 107 VLPIYGGQSYGAQLSALRRGVHVVV 131
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQ 750
IIF TK E ++ ++ G+ A ++GD QQ+R+ + Q
Sbjct: 250 IIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQ 291
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRL D LE+G +L +VLDEAD MLDMGF + +I++ R+TL++SAT P
Sbjct: 130 TPGRLRDHLERGALDLSGLIGVVLDEADEMLDMGFREDLEEILDATPDTRRTLLFSATMP 189
Query: 437 KEVKKLAEDYLGDYIQINIG 496
+ + +LA+ Y D +++++G
Sbjct: 190 QAIVRLAQKYQSDALRLSLG 209
Score = 42.3 bits (95), Expect = 0.012
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
QTGSGKT+A+ + I +Q P++ + P+ L +APTRELA Q+ + +
Sbjct: 44 QTGSGKTVAFGIALAQDILDQISGTPLQ--ERPLVLAIAPTRELALQVSRELGWLYAKAG 101
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+R GG ++ R L G IV+
Sbjct: 102 LRIATCVGGMDASKERRALRSGPAIVV 128
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 77.0 bits (181), Expect = 5e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + + LVLDEADRMLDMGF I IIE++ RQ L++SAT
Sbjct: 129 ATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNLLFSATL 188
Query: 434 PKEVKKLAEDYLGDYIQINI 493
K+VK LA+ + D I+I I
Sbjct: 189 SKQVKALAKSAIPDAIEIEI 208
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT +++LP + + P IR A++L PTRELA Q+++ + +
Sbjct: 46 QTGTGKTASFVLPLLHRFADAPKIRP-KRVRAIILTPTRELALQVEENINQYAKYLPLTA 104
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q + L GV++++
Sbjct: 105 MAMYGGVDAAPQKKRLIEGVDLLV 128
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 562 ENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEV 741
++K + LL + Q Q ++ +IF++TK A + + + G A H ++Q R+++
Sbjct: 227 KDKKSALLSHLIQEQN-WSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQL 285
Query: 742 LYQF 753
L F
Sbjct: 286 LIDF 289
>UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 637
Score = 77.0 bits (181), Expect = 5e-13
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI---IEQIRPDRQTLMWSA 427
TPGRL LE G L RC LVLDEADRML +GFE Q+ KI + RQTL++SA
Sbjct: 240 TPGRLNAVLESGALKLDRCKILVLDEADRMLALGFEEQLLKIRDALPNANDGRQTLLFSA 299
Query: 428 TWPKEVKKLAEDYLGD 475
T+PK V+ +++ +LG+
Sbjct: 300 TFPKAVRTISKSWLGE 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 9 GSGKTLAYILPAI------VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
GSGKTL ++LPAI + N + P ALV+APTREL QI V
Sbjct: 148 GSGKTLGFLLPAIEVALRDLRENPNAGKKYPGSPAALVVAPTRELTLQISTVCNKLKKAV 207
Query: 171 YVRNTCVFGGAPKREQARDL 230
VR+ V+GG + +Q L
Sbjct: 208 PVRSVAVYGGVSQEDQEEAL 227
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQ-EPGAKTIIFVETKRKAENISRNIRRYGWPAVCM 705
Q V +C EH+K KL + ++ + ++ ++F + + I+ +R+ +
Sbjct: 349 QTVHVCAEHKKSRKLMKYITKLRAADGRARSRVLVFANRIKTVQFIAELCKRHNEKVSTL 408
Query: 706 HGDKTQQERDEVLYQF 753
G Q+ RD+ + F
Sbjct: 409 FGTMKQERRDQAMKDF 424
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMW 421
+TPGRL+ F+ G +L C ++VLDEADR+LD GFE ++R+ +E R RQ +M
Sbjct: 342 ATPGRLLHFIRSGLISLSMCNFIVLDEADRLLDEGFEGEMREFLEHEDLPPRETRQVVML 401
Query: 422 SATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
SAT+ EV+ L L D I + +G + +P
Sbjct: 402 SATFEDEVRDLGMSLLADPITVTVGVVGVP 431
Score = 48.0 bits (109), Expect = 2e-04
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI--NNQPPIR--RGDG---PIALVLAPTRELAQQIQQVAADFG 161
QTGSGKT A++LP + + ++ P+ DG P A+V+ PT ELAQQI F
Sbjct: 251 QTGSGKTAAFMLPILKTVLDPSKGPVLGVAADGKPAPRAIVVVPTHELAQQILFEGMKFA 310
Query: 162 HTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ VR GG R L GV +++
Sbjct: 311 TGTSVRVHLTHGGVNVRHDLMQLRSGVSVLV 341
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +1
Query: 556 EKENKLNVLLQ-EIGQSQEPGA--KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQ 726
+K +KL LL+ +I ++ K I+FVE +R A+ ++ + PAV + G+ +Q
Sbjct: 446 DKHDKLLELLKTDIDNYKQNNVLKKIIVFVERRRTAQQVASALSMEEVPAVELQGELSQM 505
Query: 727 ERDEVLYQF 753
ERDE +++F
Sbjct: 506 ERDESMHRF 514
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID +++GT +L T +LDEAD+MLDMGF I I DRQT+++SAT P
Sbjct: 131 TPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTILFSATMP 190
Query: 437 KEVKKLAEDYLGD--YIQINIGSLQLPQI 517
+ + + + D +++I L +PQI
Sbjct: 191 QPILDITRRFQRDPQFVKITRKELTVPQI 219
Score = 43.2 bits (97), Expect = 0.007
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYVR 179
QTG+GKT A+ +P I ++ P + ALVL+PTRELA Q ++ + + +
Sbjct: 50 QTGTGKTAAFGIPIIERLD--PDNKNVQ---ALVLSPTRELAIQTAEEFSRLMKYKKGLN 104
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GG P Q R L+ V++VI
Sbjct: 105 VVPIYGGQPIERQLRALKGTVQVVI 129
Score = 40.3 bits (90), Expect = 0.050
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +1
Query: 472 RLHSDQYRIITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 651
R D + T + QI E + +KL L + + + A ++F TKR
Sbjct: 199 RFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEALCRTLDMNNPELA--LVFCNTKRT 256
Query: 652 AENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+++ ++ G+ +HGD QQ+RD V+ +F
Sbjct: 257 VDDLMSRMQARGYFVEALHGDMKQQQRDRVMARF 290
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + + LVLDEADRMLDMGF I+K+IE + +RQ +M+SAT+
Sbjct: 152 ATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQNMMFSATF 211
Query: 434 PKEVKKLAEDYLGDYIQI 487
+KKLA L D ++I
Sbjct: 212 STPIKKLALGLLNDPVEI 229
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ILP I + + +R +LVL PTRELA Q++ A + +R+
Sbjct: 69 QTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKAYTKYLALRS 127
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG R Q + L+ GV+I++
Sbjct: 128 DAVFGGVSIRPQVKRLQGGVDILV 151
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G++ +TPGRL D + +G +L +++VLDEAD ML MGF+ ++ I+ +
Sbjct: 119 LRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSK 178
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
TL++SAT P+EV +A +Y+ D ++I +G
Sbjct: 179 NTLLFSATMPREVAAIAANYMKDPLEIIVG 208
Score = 42.7 bits (96), Expect = 0.009
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
QTG+GKT A+ +P I + + ++R ALVL PTREL Q+ G + ++
Sbjct: 48 QTGTGKTAAFGIPLIQLTDTR--LKRTQ---ALVLCPTRELCVQVAGDLNLMGRYVQKLK 102
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GGA Q +L +G ++V+
Sbjct: 103 IVPVYGGASIVSQTEELRKGAQVVV 127
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 610 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
P IIF T+ + I + G+ A +HGD +Q +RD V+++F
Sbjct: 241 PELYAIIFCRTRLETREIVDKLIEDGYSADALHGDLSQSQRDHVMHKF 288
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID ++G L LV+DEADRMLDMGF P + +I+ + +RQTL +SAT
Sbjct: 350 ATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQTLFFSATM 409
Query: 434 PKEVKKLAEDYLGDYIQINI 493
E+++LA+ +L + +I +
Sbjct: 410 APEIRRLADAFLQNPKEITV 429
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++ LP + ++++ R P +L+L PTRELA Q+ + +G + +
Sbjct: 268 QTGTGKTASFTLPMMDILSDRRA--RARMPRSLILEPTRELALQVAENFVKYGQYLKLNH 325
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG +Q L +GV+++I
Sbjct: 326 ALLIGGESMNDQRDVLSKGVDVLI 349
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D L +GT +L +LVLDEAD ML MGF I I+E D+QT ++SAT P
Sbjct: 131 TPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALFSATMP 190
Query: 437 KEVKKLAEDYLGDYIQINI 493
++K++ + Y D ++I I
Sbjct: 191 HQIKRITDQYQKDPVKIEI 209
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYVR 179
QTG+GKT A+ LP + I+ + P ALVL PTRELA Q+ + +
Sbjct: 50 QTGTGKTAAFSLPLLSRIDTTK-----NKPQALVLCPTRELAIQVAEAFQTYARGVDNFH 104
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
++GGA R Q R L++ ++++
Sbjct: 105 VLPIYGGADMRNQLRALKQNPQVIV 129
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 76.6 bits (180), Expect = 6e-13
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 26/112 (23%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD----- 403
+TPGRLID LE L RCTY+VLDEADRM+DMGFEP ++KI+E + +PD
Sbjct: 524 ATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAE 583
Query: 404 ----------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
RQT+M++AT P V++LA YL + IGS P
Sbjct: 584 DPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP 635
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVAADFGHTS 170
+TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++ FG
Sbjct: 436 ETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL 495
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+R V GG + +Q L G EIVI
Sbjct: 496 GIRTVAVIGGISREDQGFRLRMGCEIVI 523
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1
Query: 514 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWP 693
+ + Q V + E EK KL +L+ Q +P IIFV K+ + +++++ + G+
Sbjct: 636 HERVEQKVFLMSESEKRKKLLAILE---QGFDP--PIIIFVNQKKGCDVLAKSLEKMGYN 690
Query: 694 AVCMHGDKTQQERDEVL 744
A +HG K Q++R+ L
Sbjct: 691 ACTLHGGKGQEQREFAL 707
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D ++ N + ++LDEADRMLDMGF P IRKI +Q LM+SAT+
Sbjct: 128 ATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQQMLMFSATF 187
Query: 434 PKEVKKLAEDYLGDYIQINI 493
++K+A+++L + + I+I
Sbjct: 188 DPPIQKIAQEFLTNPVTISI 207
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A++LP + + G GP L+++PTRELA QI + + +
Sbjct: 46 QTGTGKTAAFVLPILDKLTKNRS--EGRGPRVLIVSPTRELATQITDSIKKYSRYLRINS 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG Q R + ++I++
Sbjct: 104 ITITGGISYGLQNRMFSKPIDILV 127
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID LE+G L + + VLDEAD ML MGF + KI+ Q DRQT ++SAT P
Sbjct: 128 TPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMP 187
Query: 437 KEVKKLAEDYLGDYIQINI 493
++ L +L + + +
Sbjct: 188 PSIRMLVNKFLRSPVTVTV 206
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + ++ Q + A+VL PTRELA Q+ A F S +R
Sbjct: 48 QTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELAIQVHDAMAQFVGNSGLRT 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG Q L+RGV IV+
Sbjct: 103 LAIYGGQSIDRQMLQLKRGVHIVV 126
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 583 LQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
LQ I + ++P +IFV T+R A ++ ++ G HGD +QQ R+ +L +F
Sbjct: 233 LQPILEMEDPET-ALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRF 288
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/89 (42%), Positives = 55/89 (61%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L EG + PGRL+D +E+G +L + LVLDEAD+MLDMGF I +I+ + DR
Sbjct: 127 LEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDR 186
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINI 493
T+++SAT PK + L E L + ++ I
Sbjct: 187 HTVLFSATMPKSIAALVESLLRNPAKVEI 215
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++ LP + + P +G LVLAPTREL QI F VR
Sbjct: 52 QTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRV 111
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
T +FGG + Q + LE GV+I++
Sbjct: 112 TTIFGGVSQVHQVKALEEGVDIIV 135
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L +G+ +TPGRL++ + +L +LVLDEADRMLDMGF I+KI++ + R
Sbjct: 121 LKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKR 180
Query: 407 QTLMWSATWPKEVKKLAEDYL 469
Q L++SAT+ VKKLA D L
Sbjct: 181 QNLLFSATFSTAVKKLANDML 201
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ LP + ++ +P + AL+L PTRELA Q+ + + +
Sbjct: 46 QTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISV 105
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
++GG QA+ L++G +I++
Sbjct: 106 LTIYGGMKMATQAQKLKQGADIIV 129
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID +EKGT + + YLV+DEAD M +MGF QI II+ + R T++ SAT P
Sbjct: 129 TPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSATMP 188
Query: 437 KEVKKLAEDYLGDYIQINI 493
++ L+ Y+ D I I
Sbjct: 189 SAIETLSNRYMKDPIHAEI 207
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT A+ +P ++ + P ALVL PTRELA Q+++ + G ++
Sbjct: 49 QTGSGKTAAFAIPICQLVDWDE-----NKPQALVLVPTRELAIQVKEDMFNIGRFKRLKV 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+G AP Q ++L++ +V+
Sbjct: 104 AAVYGKAPFYHQEKELKQKTHVVV 127
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ID + + L+ +VLDEADRMLD+GF P I KI+ + +RQTL+ SAT P
Sbjct: 131 TPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSATVP 190
Query: 437 KEVKKLAEDYL 469
++KLA+ Y+
Sbjct: 191 PTIEKLAQRYM 201
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A H +
Sbjct: 49 RTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLTHGQRINV 105
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG P R Q L+R IV+
Sbjct: 106 VAVYGGKPLRSQMEKLKRAPHIVV 129
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 580 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+L E+ + ++P K I+F TKR E I++ + + C+HGD Q R+ L F
Sbjct: 234 MLVELLKREQP-QKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDF 290
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR +D +++G N + +Y VLDEAD MLDMGF I+KII + +RQ+ ++SAT P
Sbjct: 126 TPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSATIP 185
Query: 437 KEVKKLAEDYL 469
E+ +LA+ ++
Sbjct: 186 SEIIELAKGFM 196
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G S +R
Sbjct: 47 KTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALGKRSGIRT 100
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG +Q + RG I++
Sbjct: 101 VVVYGGVSINKQIELILRGANIIV 124
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
+E KL L I + + K+IIF TK A I + +G AV MHGD TQ +R++
Sbjct: 223 RERKLRTLFSYIDKYKPE--KSIIFSRTKAGANMIYEALINHGQDAVIMHGDLTQAQREK 280
Query: 739 VLYQF 753
LY+F
Sbjct: 281 ALYRF 285
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 224 GLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 403
GL G++ TPGR++D ++K + LVLDEAD ML MGF P ++ I+E + D
Sbjct: 159 GLKNGAQVVIGTPGRILDHIKKDNFDASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGD 218
Query: 404 RQTLMWSATWPKEVKKLAEDYLGD 475
R + M+SAT P +V+ +A ++L D
Sbjct: 219 RVSYMYSATMPPKVRSVAREFLDD 242
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI----QQVAADFGHTS 170
QTGSGKT A++LP +N ++ L+L PTRELA+QI +Q+ T+
Sbjct: 86 QTGSGKTGAFLLPLFDLVNPDKEEQQ-----VLILTPTRELARQIHEEFEQMKIATPRTN 140
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+ ++GG + Q L+ G ++VI
Sbjct: 141 RMEAVLIYGGVGYQPQIDGLKNGAQVVI 168
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL D L +GT L LDEAD+M DMGF P++R I+ + R D Q L++SAT
Sbjct: 155 ATPGRLNDHLRQGTCILDSIEITALDEADQMADMGFLPEVRAILGETRADGQRLLFSATL 214
Query: 434 PKEVKKLAEDYLGDYIQ 484
+EV+ L +L D++Q
Sbjct: 215 DREVQSLVRQFLPDHVQ 231
Score = 56.4 bits (130), Expect = 7e-07
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKTLA+ LP + ++ P ALVL PTRELA Q+ + +
Sbjct: 71 QTGSGKTLAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSYAGAMGLTV 130
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
GG P +Q L RGV+I++
Sbjct: 131 RPAVGGTPFSKQVDQLRRGVDILV 154
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/100 (39%), Positives = 59/100 (59%)
Frame = +2
Query: 188 CVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 367
CV + L G+ TPGRL D +E+G+ +L +VLDEAD MLD+GF
Sbjct: 123 CVGGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEMLDLGFRE 182
Query: 368 QIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 487
+ I+ +R+TLM+SAT PKE++ LA+++ D ++I
Sbjct: 183 DLEFILGSAPEERRTLMFSATVPKEIEALAKEFQQDAVRI 222
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAY-ILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYV 176
QTGSGKT+A+ I A + + D PIAL +APTRELA Q+ +++ +G
Sbjct: 60 QTGSGKTVAFGIAIADQILQGADRLLFADTPIALAIAPTRELALQVARELGWLYGEAGAH 119
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
TCV GG R + R L+RG IV+
Sbjct: 120 IATCV-GGMDYRTERRALDRGAHIVV 144
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/80 (48%), Positives = 50/80 (62%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D E+GT L LV+DEADRMLDMGF P I +I + RQTL +SAT
Sbjct: 133 ATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLFFSATM 192
Query: 434 PKEVKKLAEDYLGDYIQINI 493
E+ KL E +L + + I
Sbjct: 193 APEIIKLTEQFLHSPVCVEI 212
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT +++LP + + R P L+L PTRELA Q+++ +G +
Sbjct: 51 QTGTGKTASFVLPMLTLLEKGRAKARM--PRTLILEPTRELAAQVKENFDKYGINHRLNV 108
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG Q R LERG +++I
Sbjct: 109 ALLIGGVSFDHQDRKLERGADVLI 132
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 75.8 bits (178), Expect = 1e-12
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 12/93 (12%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 403
L +G +TPGRLIDFL++G + C +VLDEADRMLDMGFE QIRKI+ PD
Sbjct: 237 LSKGCHFMIATPGRLIDFLDEGMLRMDHCHSVVLDEADRMLDMGFEHQIRKILS--NPDY 294
Query: 404 -----------RQTLMWSATWPKEVKKLAEDYL 469
RQT+++SAT+P V ++ +L
Sbjct: 295 GMPQPSGDGLPRQTVLFSATFPPSVLQIGRSFL 327
Score = 56.0 bits (129), Expect = 9e-07
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP------IRRGD----GPIALVLAPTRELAQQIQQVAA 152
QTGSGKTLAY+LP + I N P + + D P ALVL PTREL QQI
Sbjct: 152 QTGSGKTLAYVLPIVNRILNSYPKLAMNTLAKSDLNIQCPSALVLVPTRELVQQILLEFN 211
Query: 153 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ + R V+GG + Q +L +G +I
Sbjct: 212 KMLYRCFPRAVGVYGGQNRSRQIHELSKGCHFMI 245
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +1
Query: 523 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 702
I+Q + I ++ + ++++ +L E+ Q ++ ++F TKR E + ++ + G
Sbjct: 370 IVQKMKIVEKFDWKSEVQKILNELLQDKDEDESILVFCNTKRMVELLEFHLYKSGLKCGR 429
Query: 703 MHGDKTQQERDEVL 744
+HG Q RD L
Sbjct: 430 LHGGMGQTNRDRSL 443
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 212 RASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 391
R L +G + TPGR++D +++GT +L ++LDEAD MLDMGF I I+E
Sbjct: 115 RQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILED 174
Query: 392 IRPDRQTLMWSATWPKEVKKLAEDY 466
I +RQ L++SAT P+E+ +LA+ Y
Sbjct: 175 IPYERQFLLFSATLPQEILQLAQRY 199
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
QTG+GKT A+ +P + +I+++ + A++L PTRELA Q+ + + +
Sbjct: 49 QTGTGKTAAFGIPLLENIDSED-----NNLQAIILCPTRELAIQVAEELRKLSVYLPKID 103
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GG P Q + L++GV+I+I
Sbjct: 104 VLPVYGGQPIDRQIKALQKGVQIII 128
Score = 39.5 bits (88), Expect = 0.087
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 622 TIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+++F TKRK + + +++ G+ A +HGD TQ +RD V+ +F
Sbjct: 246 SLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKF 289
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/82 (46%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ +TPGRLID +++G+ ++ R T+LVLDEAD MLDMGF I+ I++ + PD
Sbjct: 116 LKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDE 174
Query: 407 QTL-MWSATWPKEVKKLAEDYL 469
+ + ++SAT P E+ +L+E+YL
Sbjct: 175 KVMSLFSATMPIEILRLSEEYL 196
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/83 (37%), Positives = 44/83 (53%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TG+GKT AY + + I + G G L++APTRELA QI + F + VR
Sbjct: 48 TGTGKTGAYSISMLQEI------KEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPV 101
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
++GG Q L+RG EI++
Sbjct: 102 AIYGGQSMGVQLDALKRGAEILV 124
Score = 38.3 bits (85), Expect = 0.20
Identities = 19/71 (26%), Positives = 40/71 (56%)
Frame = +1
Query: 541 ICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKT 720
+ ++ EK + L ++E G+ Q TI+F TK + +++R + + + AV + GD +
Sbjct: 220 VIRDREKMDYLVDFIKENGKGQ-----TIVFCSTKYRTRDVARMLHKRNYGAVAIEGDMS 274
Query: 721 QQERDEVLYQF 753
Q R++ + +F
Sbjct: 275 QHRREQSMSRF 285
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGRLID LE+G +L Y VLDEAD ML +GF I I++Q RQT+++SAT
Sbjct: 131 TPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATLN 190
Query: 437 KEVKKLAEDYLGDYIQINI 493
E+ +LA YL + + +++
Sbjct: 191 DEIHRLARKYLREPVVVDL 209
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 173
+TG+GKTLA+ LP I ++ + + RG P A+V+APTRELA+Q+ + + G
Sbjct: 45 RTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPRAIVIAPTRELAKQVAEEFSKSG--PQ 102
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+ V+GGA Q L RGV++V+
Sbjct: 103 LSTVTVYGGAAYGPQENALRRGVDVVV 129
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
K I+F TKR+A+ ++ + G + +HGD Q +R+ L F
Sbjct: 247 KAIVFTRTKREADELANELIHRGIESEALHGDLAQSQRERALGAF 291
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR +D + +GT L +VLDEAD MLDMGF I I+EQ RQT+++SAT
Sbjct: 184 ATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATL 243
Query: 434 PKEVKKLAEDYLGDYIQINIG 496
P + ++A +L D ++I IG
Sbjct: 244 PPRMDQIARRHLRDPVRIQIG 264
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +G R
Sbjct: 103 TGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARV 159
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GGAP Q R L +GV++V+
Sbjct: 160 LPVYGGAPIGRQVRALVQGVDVVV 183
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + G L +VLDEAD+MLD+GF P IR+I+ ++ RQ +M+SAT
Sbjct: 186 ATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATM 245
Query: 434 PKEVKKLAEDYLGD 475
PK ++ LA ++L D
Sbjct: 246 PKPIRALAGEFLRD 259
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
QTG+GKT A++LP + I N P R ALVLAPTRELA QI A +G +
Sbjct: 102 QTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTYGKFTRP 159
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
V GGA QAR +E GV++++
Sbjct: 160 SVAVVIGGAKPGPQARRMESGVDLLV 185
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
Q V + EK++KL LL ++ + I+F TK A+ ++R++ G A +H
Sbjct: 277 QQVLLLAPEEKKDKLAWLLADVAVE-----RAIVFTRTKHGADKVTRHLEDAGIGAAAIH 331
Query: 709 GDKTQQERDEVLYQF 753
G+K+Q +R+ L QF
Sbjct: 332 GNKSQGQRERALDQF 346
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D + + L + +++DEADRMLDMGF P I I+ Q+ RQ+L++SAT
Sbjct: 128 ATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSLLFSATC 187
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P +++LA + D + + +
Sbjct: 188 PPRIQELAATFQNDAVIVRV 207
Score = 56.4 bits (130), Expect = 7e-07
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT ++LP + I R G ALVL+PTRELA QI Q A D+ +
Sbjct: 46 QTGTGKTGGFLLPVLHKIAEGR--RHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNA 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG Q R+L+R +IV+
Sbjct: 104 VLLVGGVDFIRQERNLKRNWDIVV 127
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +1
Query: 568 KLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLY 747
KL +L + + + + + IIF TKR AE++S + G+P+ +HGDK+Q R+ VL
Sbjct: 230 KLGLLKKVLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLS 289
Query: 748 QF 753
+F
Sbjct: 290 RF 291
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/72 (47%), Positives = 53/72 (73%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+T GRL+D +++ +L + +VLDEADRMLDMGF IRKI++ + RQTL++SAT+
Sbjct: 161 ATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATF 220
Query: 434 PKEVKKLAEDYL 469
++KLA+D++
Sbjct: 221 SAPIRKLAQDFM 232
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDG--PIA-LVLAPTRELAQQIQQVAADFGHTSY 173
QTG+GKT A++LP++ + P+ LVL PTRELA QI Q +
Sbjct: 74 QTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLP 133
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
+R+T +FGG +Q DL G EIV+
Sbjct: 134 LRHTVLFGGMNMDKQTADLRAGCEIVV 160
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ N N+ Q + +K N L L+ ++ +Q I+F +TK+ + ++R + R
Sbjct: 245 TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQ-----VIVFCKTKQSVDRVTRELVRRN 299
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
A +HGD++QQ R E L F
Sbjct: 300 LSAQAIHGDRSQQSRLETLNAF 321
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/92 (39%), Positives = 58/92 (63%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID +E+GT +L + +VLDEAD ML+MGF I +I+ + RQT+++SAT
Sbjct: 127 ATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSATV 186
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLPQITTFF 529
K + ++A Y+ + + + P+I F+
Sbjct: 187 SKPILRIARKYMRNPQVMRVEKKHSPKIDEFY 218
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + ++ + P AL++ PTREL Q+ + G V+
Sbjct: 49 QTGTGKTAAFAIPVLENLEAERV------PQALIICPTRELCLQVSEEIKRIGKYMKVKV 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GG Q L RGV +++
Sbjct: 103 LAVYGGQSIGNQIAQLRRGVHVIV 126
Score = 40.3 bits (90), Expect = 0.050
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+IF TKR+ + + R + R G+ A +HGD +Q +R+ V+ +F
Sbjct: 243 LIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERF 285
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 19/111 (17%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 403
+ +G+ +TPGRL+D LE+ L +CTY+V+DEADRMLDMGFE + KI+ +
Sbjct: 372 MSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSN 431
Query: 404 ------------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
RQT+M+SAT P V LA+ YL + + + IG++
Sbjct: 432 ASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNI 482
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSY 173
+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ F
Sbjct: 294 ETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLG 353
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
R V GG EQ+ + +G IV+
Sbjct: 354 FRCVSVVGGHAFEEQSFQMSQGAHIVV 380
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 583 LQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQ 750
++EI +S IIFV KR E I++ + GW AV +HG K+Q++R+ + Q
Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQ 561
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D E+G L LV+DEADRMLDMGF P I +I + + RQTL ++AT
Sbjct: 128 ATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQTLFFTATM 187
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLPQIT 520
P E++++ E +L + ++ + +T
Sbjct: 188 PPEIRRITETFLHNPQKVEVSKPATTAVT 216
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A++LP + + R P L+L PTRELA Q+++ +G +
Sbjct: 46 QTGTGKTAAFVLPMLTILEKGRA--RARMPRTLILEPTRELAAQVKENFDRYGAGQKLNV 103
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG +Q L RGV+++I
Sbjct: 104 ALLIGGVSFGDQDAKLTRGVDVLI 127
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 553 HEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 732
HEK L LL+E + IIF KR+ + ++++++G+ +HGD Q R
Sbjct: 229 HEKRELLRRLLREAKDLKN----AIIFCNRKREVAIVHKSLQKHGFSVGALHGDMDQPAR 284
Query: 733 DEVLYQF 753
L QF
Sbjct: 285 MAALEQF 291
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = +2
Query: 209 KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 388
K + L G + +TPGRL+D + +G +L + VLDEADRMLDMGF I++I++
Sbjct: 112 KPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILK 171
Query: 389 QIRPDRQTLMWSATWPKEVKKLAEDYL 469
+ RQTL +SAT P E++ LA L
Sbjct: 172 LLPARRQTLFFSATMPPEIETLANSML 198
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT A+ +P + + + G ALVL PTRELA QI + +G + +++
Sbjct: 46 QTGTGKTAAFSIPILQKLYKTDHRK---GIKALVLTPTRELAIQIGESFEAYGRYTGLKH 102
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+FGG ++ Q L G++I++
Sbjct: 103 AVIFGGVGQKPQTDALRSGIQILV 126
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
EK+ K ++L+ + + +IF TK A+ ++R + + G A +HG+KTQ R
Sbjct: 224 EKKEKKDLLIHLLKDTSIESV--LIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQ 281
Query: 736 EVLYQF 753
L F
Sbjct: 282 RALTNF 287
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G+ TPGRL D +E+G L +VLDEAD MLDMGF + I+ + +R
Sbjct: 121 LESGAHIVVGTPGRLRDHIERGVLRLSDIKAVVLDEADEMLDMGFREDLTFILGKAPVER 180
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
+TL++SAT P ++ KLA+ Y D ++I++ S
Sbjct: 181 RTLLFSATVPTQIVKLAKTYQKDSVRISVSS 211
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAY-ILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYV 176
QTGSGKTLA+ I A + + R P+A+++APTRELA Q+ +++ + T
Sbjct: 45 QTGSGKTLAFGISIATTLLAEKMEFDRPKIPLAIIIAPTRELALQVRKELEWLYVRTKAQ 104
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+CV GG R + R LE G IV+
Sbjct: 105 FASCV-GGMDPRAERRTLESGAHIVV 129
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D +++ + LVLDEADRMLDMGF I+KI+ + RQ LM+SAT+
Sbjct: 129 ATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATF 188
Query: 434 PKEVKKLAEDYLGDYIQINI 493
E+++LA+ + ++I++
Sbjct: 189 SDEIRELAKGLVNQPVEISV 208
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G +R+
Sbjct: 46 QTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYGKYLPLRS 104
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG P Q + L GV++++
Sbjct: 105 AVVFGGVPINPQIQKLRHGVDVLV 128
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L L R LVLDEADRML +GF ++ +++E + +QTL++SAT+
Sbjct: 141 ATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPAKKQTLLYSATF 200
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQ 505
P+EV+ L L ++ ++ S Q
Sbjct: 201 PEEVRALTAKLLHQPLEYHLQSEQ 224
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFG--HTSYV 176
TGSGKT A+ +P + + + G + LVL PTRELAQQ+ + +
Sbjct: 55 TGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQL 114
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
+ FGG Q + L G ++++
Sbjct: 115 KIVAAFGGVSVNLQMQSLRAGADVLV 140
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 559 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 738
+E K +L I Q Q ++ +IFV K ++++ + + G A HGDK Q R
Sbjct: 237 REQKTALLAHLIKQHQ--WSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTR 294
Query: 739 VLYQF 753
VL F
Sbjct: 295 VLDGF 299
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/91 (39%), Positives = 54/91 (59%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 406
L G++ TPGR+ID +EKG +L LVLDEAD ML MGF + I DR
Sbjct: 161 LKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDR 220
Query: 407 QTLMWSATWPKEVKKLAEDYLGDYIQINIGS 499
T ++SAT P ++K+A ++L D +++ + +
Sbjct: 221 LTALFSATMPAAIEKVAREHLKDPVKVAVST 251
Score = 53.2 bits (122), Expect = 7e-06
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTSYVR 179
QTG+GKT A+ LP + ++ + ALVLAPTRELA Q Q DF T+ +
Sbjct: 90 QTGTGKTAAFGLPLLAIVDADERNVQ-----ALVLAPTRELAMQSAQAIEDFAARTARLD 144
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
V+GG+P Q L+RG ++V+
Sbjct: 145 VVPVYGGSPYGPQIGALKRGAQVVV 169
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 586 QEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 744
Q I + QE I+FV T+ E +S + G+ A + GD Q ER+ ++
Sbjct: 284 QHIKEGQEEADAAIVFVRTRADVEEVSLELSSRGFRAAGISGDVAQTERERMV 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,126,482
Number of Sequences: 1657284
Number of extensions: 16469188
Number of successful extensions: 48992
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 44665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47917
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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