Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0456
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    81   1e-17
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    30   0.017
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 80.6 bits (190), Expect = 1e-17
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
 Frame = +2

Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII-EQIRP---DRQTLMW 421
           +TPGRL DF+ +G  +     Y VLDEADRMLDMGF   + +++  Q  P   +RQTLM+
Sbjct: 291 ATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMF 350

Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
           SAT+P+EV++LA  +L +YI I +G
Sbjct: 351 SATFPEEVQQLAGKFLLNYIFIAVG 375



 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   QTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTS 170
           QTGSGKT A++LP I ++  +  PP    +   P+ ++++PTRELA QI      F + S
Sbjct: 203 QTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNS 262

Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
            V+   ++GG     Q   +  G  I++
Sbjct: 263 TVKVAVIYGGTSTNHQRGRILGGCHILV 290



 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 22/66 (33%), Positives = 38/66 (57%)
 Frame = +1

Query: 556 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 735
           +K +KL  +L++      P  +T+IFVETKR A+ ++  +      +  +HGD+ Q ER+
Sbjct: 395 DKRSKLVSILEKA-----PNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSERE 449

Query: 736 EVLYQF 753
           + L  F
Sbjct: 450 KALLDF 455


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 403 QTDFDVVSYLAQRSEETC*GLLGRLHSDQYRIITTSANHNILQIVDIC-QEHEK 561
           +T F V + + +R       +L +L+ ++YR +      +  QIVDIC + H+K
Sbjct: 469 ETQFVVANIILRRRFALINSILRKLYKNKYRKLIVDGKKSEEQIVDICIRSHDK 522


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 628 IFVETKRKAENISRNIRRYGWPAVC 702
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 628 IFVETKRKAENISRNIRRYGWPAVC 702
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 628 IFVETKRKAENISRNIRRYGWPAVC 702
           IFV+++     I  N+    W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 646 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 560
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 419 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 447


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 646 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 560
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 426 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,251
Number of Sequences: 336
Number of extensions: 4470
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)