Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0456
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 145 7e-36
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 101 1e-22
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 98 1e-21
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 86 4e-18
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 75 8e-15
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 69 9e-13
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 66 5e-12
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 60 3e-10
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 59 8e-10
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 58 1e-09
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 58 1e-09
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 58 1e-09
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 56 5e-09
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 52 7e-08
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 52 7e-08
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 48 2e-06
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 47 3e-06
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 46 6e-06
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 46 8e-06
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 46 8e-06
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 45 1e-05
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 45 1e-05
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 43 5e-05
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 32 0.10
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 32 0.10
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 27 2.9
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 26 6.6
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 26 6.6
SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|... 25 8.8
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 8.8
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 145 bits (351), Expect = 7e-36
Identities = 64/85 (75%), Positives = 76/85 (89%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRL+D L+ TNL+R TYLVLDEADRMLDMGFEPQIRKI++QIRPDRQT+M+SATW
Sbjct: 251 ATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATW 310
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEV++LA DYL DYIQ+ +GSL L
Sbjct: 311 PKEVQRLARDYLNDYIQVTVGSLDL 335
Score = 120 bits (288), Expect = 3e-28
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKTL+Y LPAIVHIN QP + GDGPI LVLAPTRELA QIQQ FG +S +RNT
Sbjct: 168 TGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNT 227
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
CV+GG P+ Q RDL RGVEI I
Sbjct: 228 CVYGGVPRGPQIRDLIRGVEICI 250
Score = 73.7 bits (173), Expect = 3e-14
Identities = 35/82 (42%), Positives = 56/82 (68%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+A+HNI QIV++ +K +L ++E+ + ++ K +IF TKR A++I+R +R+ G
Sbjct: 336 AASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDN--KVLIFTGTKRVADDITRFLRQDG 393
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
WPA+ +HGDK Q ERD VL +F
Sbjct: 394 WPALAIHGDKAQDERDWVLNEF 415
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 101 bits (241), Expect = 1e-22
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGR+ID L TNL RCTYLVLDEADRM D+GFEPQ+ +II IRPDRQT+++SA
Sbjct: 548 TPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSA 607
Query: 428 TWPKEVKKLAEDYLGDYIQINIG 496
T+P+ ++ LA L ++I +G
Sbjct: 608 TFPRAMEALARKVLKKPVEITVG 630
Score = 93.1 bits (221), Expect = 4e-20
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F +R
Sbjct: 463 KTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRA 522
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
C +GGAP ++Q DL+RG EIV+
Sbjct: 523 CCAYGGAPIKDQIADLKRGAEIVV 546
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +1
Query: 529 QIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMH 708
QIV++ E K ++L LL E+ +Q +T++FV+ + A+ + ++ + G+ + +H
Sbjct: 641 QIVEVRPEESKFSRLLELLGELYNNQLD-VRTLVFVDRQESADALLSDLMKRGYTSNSIH 699
Query: 709 GDKTQQERDEVLYQF 753
G K Q +RD + +
Sbjct: 700 GGKDQHDRDSTISDY 714
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 98.3 bits (234), Expect = 1e-21
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMW 421
+TPGRL+D +++G +L +LVLDEADRMLDMGFEPQIR I+E +RQTLM+
Sbjct: 311 ATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMF 370
Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
SAT+P++++ LA D+L DY+ +++G
Sbjct: 371 SATFPRDIQLLARDFLKDYVFLSVG 395
Score = 55.2 bits (127), Expect = 9e-09
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI-VHINNQP---PIRRGDG---------PIALVLAPTRELAQQIQQ 143
QTGSGKT ++ P + + + P P+ + G P L+LAPTREL QI +
Sbjct: 214 QTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHE 273
Query: 144 VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 251
+ F + S+VR V+GGA R Q R +++G +++
Sbjct: 274 ESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLL 309
Score = 52.8 bits (121), Expect = 5e-08
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI Q V ++ EK + L +L + P T+IFVETKR A+ ++ +
Sbjct: 399 STSENITQKVVHVEDSEKRSYLLDILHTL----PPEGLTLIFVETKRMADTLTDYLLNSN 454
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+PA +HGD+TQ+ER+ L F
Sbjct: 455 FPATSIHGDRTQRERERALELF 476
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 86.2 bits (204), Expect = 4e-18
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD------RQTLM 418
TPGRL+D + G+ + + YLVLDEADRMLD GFE IR II PD RQT+
Sbjct: 292 TPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISH-TPDPTRNGSRQTVF 350
Query: 419 WSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
+SATWP+ V+ LA +L D ++I IGS +L
Sbjct: 351 FSATWPESVRALAATFLKDPVKITIGSDEL 380
Score = 54.8 bits (126), Expect = 1e-08
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q + + ++
Sbjct: 210 ETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENLNSLIQGTNLKA 267
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
V+GGAPK EQAR + I+
Sbjct: 268 VVVYGGAPKSEQARAAKNASVII 290
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 75.4 bits (177), Expect = 8e-15
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 19/111 (17%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 403
+ +G+ +TPGRL+D LE+ L +CTY+V+DEADRMLDMGFE + KI+ +
Sbjct: 372 MSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSN 431
Query: 404 ------------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
RQT+M+SAT P V LA+ YL + + + IG++
Sbjct: 432 ASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNI 482
Score = 71.7 bits (168), Expect = 1e-13
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSY 173
+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ F
Sbjct: 294 ETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLG 353
Query: 174 VRNTCVFGGAPKREQARDLERGVEIVI 254
R V GG EQ+ + +G IV+
Sbjct: 354 FRCVSVVGGHAFEEQSFQMSQGAHIVV 380
Score = 47.6 bits (108), Expect = 2e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 583 LQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQ 750
++EI +S IIFV KR E I++ + GW AV +HG K+Q++R+ + Q
Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQ 561
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 68.5 bits (160), Expect = 9e-13
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 TPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
TPGRL+D LE KG + L+ YL++DEADR+LDM F P I KI++ I +R+TL++SAT
Sbjct: 171 TPGRLMDHLENTKGFS-LKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSAT 229
Query: 431 WPKEVKKLAEDYLGDYIQINIGS 499
+V+KL L +++ + S
Sbjct: 230 MTSKVEKLQRASLHQPVRVAVSS 252
Score = 52.4 bits (120), Expect = 7e-08
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
QTGSGKT A+ LP I + NN P A+VLAPTRELA QI + G + VR
Sbjct: 91 QTGSGKTAAFALPVIQELWNNPSPF------FAVVLAPTRELAYQISEQFEAIGGSIGVR 144
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ + GG QA L + +++
Sbjct: 145 SVVIVGGMDMVTQAVALSKKPHVLV 169
Score = 28.7 bits (61), Expect = 0.94
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 613 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
G IIF T + ++ +R G+ A+ +HG +Q R L +F
Sbjct: 285 GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKF 331
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 66.1 bits (154), Expect = 5e-12
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR++D KG + CT V+DEAD++L F P I +++ +RQ ++SAT+P
Sbjct: 169 TPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFP 228
Query: 437 KEVKKLAEDYLGDYIQINI-GSLQLPQITTFF 529
VK + +L +IN+ L L +T ++
Sbjct: 229 LIVKNFMDKHLNKPYEINLMDELTLRGVTQYY 260
Score = 42.3 bits (95), Expect = 7e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+ G+GKT A+++P++ ++ + + L+L PTRELA Q QV G V+
Sbjct: 89 KNGTGKTAAFVIPSLEKVDTKKSKIQ-----TLILVPTRELALQTSQVCKTLGKHMNVKV 143
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
GG R+ L V IV+
Sbjct: 144 MVTTGGTTLRDDIIRLNDTVHIVV 167
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 60.5 bits (140), Expect = 3e-10
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGH---T 167
QTGSGKTLAY+LP + + P R G A+++APTREL QQI VA + +
Sbjct: 186 QTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPLS 245
Query: 168 SYVRNTCVFGGAPKREQARDLERGVEIVI 254
++ + V GG K+ + + +GV I+I
Sbjct: 246 HWIVSCNVIGGEKKKSEKARIRKGVNILI 274
Score = 49.6 bits (113), Expect = 5e-07
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Frame = +2
Query: 257 TPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR------------ 397
TPGRL D LE ++ + ++VLDE DR++DMGFE + KI+ +
Sbjct: 276 TPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSI 335
Query: 398 PDRQ-TLMWSATWPKEVKKLAEDYLGDYIQI 487
P R+ T++ SAT VK+L++ L D + +
Sbjct: 336 PSRKVTMLCSATMKDTVKRLSDSALKDALYL 366
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 58.8 bits (136), Expect = 8e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR + + L Y+V DEADR+ +MGF Q+ +I+ + RQTL++SAT
Sbjct: 195 ATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSATL 254
Query: 434 PKEVKKLAEDYLGDYIQINI 493
P+ + A+ L D + + +
Sbjct: 255 PRTLVDFAKAGLQDPVLVRL 274
Score = 53.6 bits (123), Expect = 3e-08
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+++P I H+ + AL+L+P RELA Q +V DF + +R+
Sbjct: 114 RTGSGKTAAFVIPMIEHLKST---LANSNTRALILSPNRELALQTVKVVKDFSKGTDLRS 170
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG EQ L +IV+
Sbjct: 171 VAIVGGVSLEEQFSLLSGKPDIVV 194
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 58.4 bits (135), Expect = 1e-09
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 182 HVCVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 361
H C+ + L G TPGR+ D +++ VLDEAD ML GF
Sbjct: 119 HACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGF 178
Query: 362 EPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI--GSLQLPQITTFF 529
+ QI I + + P Q ++ SAT P++V ++ ++ D I+I + L L I F+
Sbjct: 179 KDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFY 236
Score = 49.6 bits (113), Expect = 5e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
Q+G+GKT + + + I+ +++ AL+LAPTRELAQQIQ+V G V
Sbjct: 64 QSGTGKTATFSISVLQKIDTS--LKQCQ---ALILAPTRELAQQIQKVVVALGDLMNVEC 118
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
GG R+ L+ GV +V+
Sbjct: 119 HACIGGTLVRDDMAALQAGVHVVV 142
Score = 35.5 bits (78), Expect = 0.008
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF T+RK + ++ + + MHGD Q +RD ++++F
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEF 304
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 58.0 bits (134), Expect = 1e-09
Identities = 31/108 (28%), Positives = 52/108 (48%)
Frame = +2
Query: 164 HILCS*HVCVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADR 343
H+ H C+ S L G TPGR+ D + + + L+LDEAD
Sbjct: 115 HMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADE 174
Query: 344 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 487
+L+ GF+ QI I + P Q ++ SAT P++V ++ + + ++I
Sbjct: 175 LLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRI 222
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
Q+G+GKT + + + I+ +R AL+L+PTRELA QIQ V G V+
Sbjct: 66 QSGTGKTATFSIGILQSIDLS--VRDTQ---ALILSPTRELAVQIQNVVLALGDHMNVQC 120
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
GG + L+ G +V
Sbjct: 121 HACIGGTSVGNDIKKLDYGQHVV 143
Score = 36.3 bits (80), Expect = 0.005
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF ++RK + ++ +R + MHG+ Q+ERD ++ F
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDF 306
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
TPGRL+ +++ + L+LDEADR+LDMGF + I+ + RQT+++SAT
Sbjct: 167 TPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQ 226
Query: 434 PKEVKKLA 457
K VK LA
Sbjct: 227 TKSVKDLA 234
Score = 46.4 bits (105), Expect = 4e-06
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+I+P I ++ + DG ALV++PTRELA Q + G
Sbjct: 84 KTGSGKTLAFIVPLIENLYRKKWTSL-DGLGALVISPTRELAIQTFETLVKIGRLHSFSA 142
Query: 183 TCVFGGAPKREQARDLER 236
+ GG +E+ L R
Sbjct: 143 GLIIGGNNYKEEKERLSR 160
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 56.0 bits (129), Expect = 5e-09
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Frame = +2
Query: 254 STPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPDRQTLMWS 424
+TPGRL+D L+ KG + LV+DEADR+L++GFE ++R+I++ + +RQTL++S
Sbjct: 217 ATPGRLLDHLQNTKGFV-FRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFS 275
Query: 425 ATWPKEVKKLA 457
AT +V+ LA
Sbjct: 276 ATQTTKVEDLA 286
Score = 52.4 bits (120), Expect = 7e-08
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
+TGSGKTLA+++P I ++ P R G G I +++PTRELA QI VA + +
Sbjct: 134 KTGSGKTLAFLIPTIEMLYALKFKP-RNGTGVI--IISPTRELALQIFGVAKELLKYHHQ 190
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
V GGA +R +A L +GV +++
Sbjct: 191 TFGIVIGGANRRAEADKLVKGVNLLV 216
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
K I+F+ + + ++ + P + +HG + QQ R ++F
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEF 382
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 52.4 bits (120), Expect = 7e-08
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
+TPGR ID + ++ +V+DEADRML+ GF ++ +II+ RQT+++SAT
Sbjct: 386 ATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSAT 445
Query: 431 WPKEVKKL 454
+V L
Sbjct: 446 MTDKVDDL 453
Score = 47.2 bits (107), Expect = 3e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 185
TGSGKT A+I+P + + +P ++ L+L PTRELA Q VA + +
Sbjct: 305 TGSGKTAAFIVPILERLLYRP--KKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVC 362
Query: 186 CVFGGAPKREQARDLERGVEIVI 254
GG + Q ++L + +IVI
Sbjct: 363 LCIGGLSLKLQEQELRKRPDIVI 385
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 52.4 bits (120), Expect = 7e-08
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+ LP I + P G AL+L PTRELA QI + A G +++
Sbjct: 52 KTGSGKTAAFALPIIEKWSKDP-----SGIFALILTPTRELAIQIDEQFAALGANLNLKH 106
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG Q+ DL + +V+
Sbjct: 107 ALIVGGMDMIRQSIDLSKRPHVVV 130
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +2
Query: 254 STPGRLIDFL----EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTL 415
+TPGRL D + E+ L+R +LV+DEADR+L F + + DRQTL
Sbjct: 131 ATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQTL 190
Query: 416 MWSATWPKEVKKL 454
+++AT +++L
Sbjct: 191 LFTATVTDAIRQL 203
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 47.6 bits (108), Expect = 2e-06
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCT-YLVLDEADRMLDMGFEPQIRKIIEQIRPDR-QTLMWSA 427
+TPGRL D L+ T +LDEADR++DMGF I I E + + + L +SA
Sbjct: 169 ATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSA 228
Query: 428 TWPKEVKKLAEDYLG-DYIQIN 490
T P +V + LG D+ IN
Sbjct: 229 TMPPKVSNVFRGILGTDFKLIN 250
Score = 47.2 bits (107), Expect = 3e-06
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TG+GKTLA++L A + P +++L+PTRELA QI + A + + +R
Sbjct: 84 KTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIFEEARKLTYGTGIRV 143
Query: 183 TCVFGGAPKREQARDLERG 239
+ GG K + + RG
Sbjct: 144 SYAIGGNSKMREENAIRRG 162
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 47.2 bits (107), Expect = 3e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
TPGRL + L ++ + L+LDEAD ++DMGF+ ++ II Q+ R+T ++SAT
Sbjct: 139 TPGRLNEMLSHISS--KHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFSAT 194
Score = 46.0 bits (104), Expect = 6e-06
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 155
TGSGKTLAY+LP + + G G AL++APTRELA QI V +
Sbjct: 47 TGSGKTLAYLLPCFDKVTRRDTDETGLG--ALIVAPTRELATQIFNVTKE 94
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 146
+TGSGKT AY++P + + Q I G AL+L PTRELAQQ+ V
Sbjct: 59 RTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNV 107
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TP R + + G L + +LV+DEAD ML G+ ++ + + Q+ + SAT
Sbjct: 146 ATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSATL 205
Query: 434 PKEVKKL 454
K + L
Sbjct: 206 SKNIASL 212
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 45.6 bits (103), Expect = 8e-06
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 394
STPGRL+D + + +LQ Y+V+DEADR+LD F+ + ++ +I
Sbjct: 266 STPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEI 313
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQI 137
TGSGKTL+Y++P + ++++ P +R +V+ PTREL Q+
Sbjct: 182 TGSGKTLSYVIPIVQCLSHRTVPRLR------CVVIVPTRELTVQV 221
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 45.6 bits (103), Expect = 8e-06
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDRQTLMWSATW 433
TPG ++D +++ + + VLDEAD MLD G Q +I + + Q +++SAT+
Sbjct: 237 TPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATF 296
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
+ V+K AE + + +I + + +L
Sbjct: 297 SERVEKYAERFAPNANEIRLKTEEL 321
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
Q+G+GKT A+ L + ++ P P A+ LAP+RELA+QI V + G + V+
Sbjct: 161 QSGTGKTAAFALTMLSRVDASVP-----KPQAICLAPSRELARQIMDVVTEMGKYTEVK 214
Score = 35.5 bits (78), Expect = 0.008
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 478 HSDQYRIITTSAN-HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKA 654
++++ R+ T + I Q+ CQ +E+K NVL++ G ++IIF + K A
Sbjct: 310 NANEIRLKTEELSVEGIKQLYMDCQS--EEHKYNVLVELYGLLTI--GQSIIFCKKKDTA 365
Query: 655 ENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
E I+R + G C+ G+ +RD ++ F
Sbjct: 366 EEIARRMTADGHTVACLTGNLEGAQRDAIMDSF 398
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 45.2 bits (102), Expect = 1e-05
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPI--ALVLAPTRELAQQIQQVAADFGHTSYVR 179
TGSGKTLA+ +P + H +R D ALV+APTRELA QI Q + +R
Sbjct: 168 TGSGKTLAFGIPILEHC-----LRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIR 222
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
+ GG ++Q R L + +V+
Sbjct: 223 VMSITGGLAVQKQQRLLNKHPHVVV 247
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +2
Query: 254 STPGRLIDFLEKG--TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQTL 415
+TPGRL + + T N ++ LVLDEADR+L ++ K++E + RQT
Sbjct: 248 ATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTF 307
Query: 416 MWSATWPKEVKK 451
++SAT+ + +++
Sbjct: 308 IFSATFDEGLQQ 319
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDRQTLMWSAT 430
+TPGRL + + + + VLDE D++L+ + I+++ P +Q +M+SAT
Sbjct: 179 ATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSAT 238
Query: 431 WPKEVKKLAEDYLGDYIQINI 493
E++ + + ++ + ++I +
Sbjct: 239 LSNEIRPICKKFMQNPLEIYV 259
Score = 41.9 bits (94), Expect = 9e-05
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +1
Query: 517 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 696
H + Q +E K K+N LL + +Q +IFV++ +A + R +R +P+
Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPS 322
Query: 697 VCMHGDKTQQER 732
+C+HG Q+ER
Sbjct: 323 ICIHGGLPQEER 334
Score = 32.7 bits (71), Expect = 0.058
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIA-LVLAPTRELAQQIQQVAADFG-HTSYV 176
++G GKT ++L + I P+ DG ++ LVL TRELA QI+ A F + V
Sbjct: 96 KSGMGKTAVFVLSTLQQIE---PV---DGEVSVLVLCHTRELAFQIKNEYARFSKYLPDV 149
Query: 177 RNTCVFGG 200
R +GG
Sbjct: 150 RTAVFYGG 157
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 42.7 bits (96), Expect = 5e-05
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 218 SPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
+P L E TP RL+ ++ G + ++ + V+DEADR+ + GF Q I+
Sbjct: 160 APKLREKYDMCIGTPMRLVQAIQTGLS-FEKVEFFVMDEADRLFEPGFIEQTDHILSACT 218
Query: 398 PDR-QTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
++SAT P V++LA+ D I+I +G
Sbjct: 219 SSNICKSLFSATIPSRVEELAKVVTVDPIRIIVG 252
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 149
TGSGKT+AY+ P + + P G A+++APTREL +QI + A
Sbjct: 92 TGSGKTIAYLFPILQKLQLHVP----GGYRAIIVAPTRELCEQIYRQA 135
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 137
TG GK+L++++PA++ Q P + + LVL P L Q +
Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP-GKVMNMVTLVLVPMMSLRQDM 1257
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 137
TG GK+L++++PA++ Q P + + LVL P L Q +
Sbjct: 1215 TGGGKSLSFLIPALIEKKRQTP-GKVMNMVTLVLVPMMSLRQDM 1257
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 90 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 233
PI ++ +P E+ ++V D Y+ TC+ P+ E + DLE
Sbjct: 93 PIDIIFSPGEEVF--FERVGGDI--PVYLSGTCIITNIPEEEDSSDLE 136
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Frame = +2
Query: 8 GFRQNVGLHLASHC-------AHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFW 160
GF + G + HC H++ AY E F Y R++T + C R W
Sbjct: 33 GFSCSTGEKIFEHCYRDNINEKHREAAAYGEAIRQVAFSKD-YSRMATVSEDKCLRLW 89
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 383 IEQIRPDRQTLMWSATWPKEVKKLAED 463
I + R +R TL S +P+E K L+ED
Sbjct: 268 IRKKRSERDTLNVSTEFPEETKDLSED 294
>SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase
Gpd3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 655 QLFSWFQQKLLFSHQVLDFVQFLA 584
+L SW+ + +SH+V+D V + A
Sbjct: 309 KLVSWYDNEWGYSHRVVDLVAYTA 332
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 131
TG GK+L Y LPA++ + RG + LV++P L Q
Sbjct: 543 TGGGKSLCYQLPAVI----EGGASRG---VTLVISPLLSLMQ 577
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,315,859
Number of Sequences: 5004
Number of extensions: 70636
Number of successful extensions: 288
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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