Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0456
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 147 7e-36
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 7e-23
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 4e-22
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 69 3e-12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 69 4e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 67 1e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 2e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 65 5e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 60 2e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 58 1e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 1e-07
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 48 6e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 44 1e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 42 4e-04
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 41 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 39 0.005
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 38 0.012
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.027
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 36 0.047
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.25
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.43
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 29 3.1
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 29 4.1
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.1
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 7.1
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 28 9.4
SB_26411| Best HMM Match : GAS2 (HMM E-Value=2.3) 28 9.4
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 147 bits (357), Expect = 7e-36
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGRLID LE TNL+RCTYLVLDEADRMLDMGFEPQIR II+QIRPDRQTLMWSATW
Sbjct: 188 ATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATW 247
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQL 508
PKEV+ LA D+L DY+ I +GSL L
Sbjct: 248 PKEVQGLAHDFLSDYVHITVGSLGL 272
Score = 104 bits (250), Expect = 7e-23
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +3
Query: 30 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 209
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 210 REQARDLERGVEIVI 254
Q R+LERGVEI I
Sbjct: 173 GPQIRELERGVEICI 187
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
+ANH ILQIVD+C++HEKE+ + + G +T+IF ETKR+A+ ++R +R G
Sbjct: 273 TANHKILQIVDVCEDHEKEHNVGSFIG--GIVILSSLQTLIFTETKRRADELTRKLRSDG 330
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 104 bits (250), Expect = 7e-23
Identities = 47/84 (55%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWS 424
TPGRL DF+EKG +L+ +L+LDEADRMLDMGFEP IR+I+E + + +RQTLM+S
Sbjct: 845 TPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFS 904
Query: 425 ATWPKEVKKLAEDYLGDYIQINIG 496
AT+P+E+++LA D+L DY+ + +G
Sbjct: 905 ATFPEEIQRLAGDFLNDYLFLTVG 928
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 170
QTGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815
Query: 171 YVRNTCVFGGAPKREQARDLERGVEIVI 254
+R +GG Q R L+ G +++
Sbjct: 816 MLRPVVCYGGVSVSHQLRQLQSGCNLLV 843
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 520 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 699
+I Q V ++EK ++L +L + G +T++FVE+KR A+ ++ + G+P
Sbjct: 936 DIEQTVIEVTDNEKRDRLTQILGDAGTD-----RTLVFVESKRSADFLAIFLSGEGFPTT 990
Query: 700 CMHGDKTQQERDEVLYQF 753
+HGD+ QQER+E L F
Sbjct: 991 SIHGDRLQQEREEALDDF 1008
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 102 bits (244), Expect = 4e-22
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 7/99 (7%)
Frame = +2
Query: 227 LGEGSRNSH---STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ-I 394
L E RN H +TPGRL+D +++G L +LVLDEADRMLDMGFEPQIR+I++Q
Sbjct: 969 LRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDS 1028
Query: 395 RPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
P RQTLM+SAT+PKE++ LA D+L +YI + +G +
Sbjct: 1029 MPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKV 1067
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +1
Query: 508 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 687
S + NI Q V E +K + L LL G Q T++FVETK+ A+ + + + G
Sbjct: 1069 STSENITQKVVWVDEFDKRSFLLDLLNASGPQQ----LTLVFVETKKGADALEMFLAKDG 1124
Query: 688 WPAVCMHGDKTQQERDEVLYQF 753
+ +HGD++Q+ER+E L F
Sbjct: 1125 YYCTSIHGDRSQREREEALRTF 1146
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT A+++P + I + P P AP DF + S R
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP------P-----AP------------PDFSYRSLCRP 956
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
V+GGA Q R+L+R +++
Sbjct: 957 CVVYGGADIGSQLRELDRNCHLLV 980
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 96.7 bits (230), Expect = 2e-20
Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = +2
Query: 257 TPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRK--------IIEQIRPD 403
TPGR+ID L TN QRCTYLVLDEADRM DMGFEPQI K II+ IRPD
Sbjct: 201 TPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPD 260
Query: 404 RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQT+M+SAT+P++++ LA L I+I +G
Sbjct: 261 RQTVMFSATFPRQMEALARKILDKPIEIQVG 291
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +3
Query: 18 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 197
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 198 GAPKREQARDLERGVEIVI 254
G EQ +L+RG EI++
Sbjct: 181 GTGISEQIAELKRGAEIIV 199
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
VFGG K EQ++ L+ G EIV+
Sbjct: 622 VAVFGGGNKYEQSKALQEGAEIVV 645
Score = 67.7 bits (158), Expect = 9e-12
Identities = 42/95 (44%), Positives = 54/95 (56%)
Frame = +2
Query: 218 SPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
S L EG+ +TPGRLID ++ TNL R TYLV DEADRM DMGF
Sbjct: 634 SKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF------------ 681
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 502
L++SAT+ K+V+ L D L D +++ IG L
Sbjct: 682 ----ALLFSATFKKKVEHLCRDILVDPVRVVIGEL 712
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 625 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+IFV K +E ++ N+R+ + +HGD Q ER +VL QF
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQF 775
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 78.2 bits (184), Expect = 7e-15
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWS 424
TPGRL DF+ + L +L+LDEADRMLD+GF P I K+IE+ + RQTLM+S
Sbjct: 609 TPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFS 668
Query: 425 ATWPKEVKKLAEDYL-GDYIQINIG 496
AT+P E++ LA +L DY+ + +G
Sbjct: 669 ATFPDEIQHLAGSFLKPDYLFLAVG 693
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+GG QA LERG ++
Sbjct: 584 CVCYGGVSVPYQASQLERGCHFLV 607
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/93 (35%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Query: 434 PKEVKKLAEDYLGDYIQINI-GSLQLPQITTFF 529
P V+ E +L +IN+ L L +T ++
Sbjct: 238 PISVRDFKEKHLRKPYEINLMDELTLHGVTQYY 270
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 161
+ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/93 (35%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Query: 434 PKEVKKLAEDYLGDYIQINI-GSLQLPQITTFF 529
P V+ E +L +IN+ L L +T ++
Sbjct: 238 PISVRDFKEKHLRKPYEINLMDELTLHGVTQYY 270
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 161
+ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 299 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 478
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 479 IQINIG 496
+ +N+G
Sbjct: 73 VTVNVG 78
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF E K ++I + G AV +HGDK+Q+ER + +F
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREF 133
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 299 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 478
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 479 IQINIG 496
+ +N+G
Sbjct: 73 VTVNVG 78
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF E K ++I + G AV +HGDK+Q+ER + +F
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREF 133
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCT---YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 427
TPGRL+ +++ T N CT LVLDEADR+LDMGF P + IIE + +RQTL++SA
Sbjct: 178 TPGRLLQHMDE-TPNFD-CTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSA 235
Query: 428 TWPKEVKKLAEDYLGDYI 481
T + VK LA L Y+
Sbjct: 236 TQTRSVKDLARLSLQSYV 253
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 183 TCVFGGAP-KREQARDLERGVEI 248
+ GG K EQ R ++ + +
Sbjct: 154 GLIIGGKDLKNEQKRIMKTNIVV 176
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW 433
+TPGR+++ + + +L V+DE D ML +GFE Q+++I+E++ RQT+++SAT
Sbjct: 261 ATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATI 320
Query: 434 PKEVKKLAEDYLGDYIQINIGSLQLP 511
P ++ +A L + I+ GS LP
Sbjct: 321 PPSIEAMASRLLNAPVFISAGSPSLP 346
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 68.1 bits (159), Expect = 7e-12
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = +2
Query: 353 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 508
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++ +G L L
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL 52
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +2
Query: 158 WTHILCS*HVCVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEA 337
+ H+ C H C+ + + L EG TPGR+ D + +G N + VLDEA
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEA 242
Query: 338 DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI--GSLQLP 511
D ML GF+ QI + ++ Q ++ SAT P +V ++ ++ D ++I + + L
Sbjct: 243 DEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLE 302
Query: 512 QITTFFKL 535
I FF L
Sbjct: 303 GIKQFFVL 310
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V+
Sbjct: 130 QSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVK 189
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
GG RE LE GV +V+
Sbjct: 190 CHACIGGTNVREDRMKLEEGVHVVV 214
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF T+RK + ++ + MHGD +Q+ERD ++ +F
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEF 376
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +2
Query: 227 LGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII---EQIR 397
L EG+ +TPGRL+D L + TYLV+DE DRML MG E Q+RKI+
Sbjct: 214 LREGADVVVATPGRLLD--------LYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTS 265
Query: 398 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 496
RQTL+WSAT P+ +++LA + + I I +G
Sbjct: 266 RARQTLLWSATLPESLERLARSAVLNPITIQVG 298
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 137
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 170
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205
Query: 171 YVRNTCVFGGAPK 209
+R V GGA +
Sbjct: 206 GIRTVSVIGGADR 218
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +2
Query: 314 TYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD-------------------RQTLMW 421
T V+ ADRM+DMGFEP+++KI+E ++PD RQT+M+
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMF 268
Query: 422 SATWPKEVKKLAEDYL 469
+AT P +V++LA++YL
Sbjct: 269 TATMPPQVERLAKNYL 284
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMW 421
TPGR++DF+ +GT +L + ++VLDE DRMLDMGF + +++ + R D+ QTL++
Sbjct: 202 TPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLF 261
Query: 422 SATWPKEVKKLAEDYL 469
SAT P A+ Y+
Sbjct: 262 SATLPPWAVNTAKKYM 277
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 179
+TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S +
Sbjct: 118 RTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSNLE 175
Query: 180 NTCVFGGAPKREQARDLERGVEIVI 254
C++GG P Q + G+++++
Sbjct: 176 VYCIYGGMPYEPQENAINSGLDVLV 200
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 182 HVCVWWCS*KRASPGLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 361
H C+ + L G TPGR+ D + + + LVLDEAD ML+ GF
Sbjct: 97 HACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGF 156
Query: 362 EPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI--GSLQLPQITTFF 529
+ QI + + P Q ++ SAT P E+ ++ ++ D I+I + L L I FF
Sbjct: 157 KEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFF 214
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V+
Sbjct: 42 QSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSVQC 96
Query: 183 TCVFGGAPKREQARDLERGVEIV 251
GG E R L+ G IV
Sbjct: 97 HACIGGTNIGEDIRKLDYGQHIV 119
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 619 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+ +IF TKRK + ++ +R + MHGD Q+ER+ ++ F
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDF 282
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
+TPGRL+D L+ L + LV+DEADR+L++GFE ++R+II + RQT+++SAT
Sbjct: 700 ATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSAT 759
Query: 431 WPKEVKKLAE 460
K V+ LA+
Sbjct: 760 QTKNVEDLAK 769
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG ++ +A L++GV ++I
Sbjct: 676 GIIMGGVNRKAEAERLQKGVNLLI 699
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 320 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 493
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 64
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 STPGRLIDFLEK-GTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 430
+TPGRL D ++ T NL++ +LVLDEADR+LD F ++ I + + RQTL++SAT
Sbjct: 131 ATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/84 (35%), Positives = 41/84 (48%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 52 KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG +QA L +VI
Sbjct: 107 AVIVGGLDMMKQALSLANKPHVVI 130
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 167
QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
Query: 168 SYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ R+ + GG ++ DLE V++++
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDLESPVDLLV 510
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR--QTLMWSA 427
+TPG L+ + +K T+LV+DEAD M D F+ +I+ I + +
Sbjct: 511 ATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTINSSEYGSKECYIS 570
Query: 428 TWPKEVKKLAEDYLGDYIQINIGSLQLPQ 514
+E + D L Q+ I LPQ
Sbjct: 571 RQIRECQAPPPDQLPIDAQVTIAGATLPQ 599
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +1
Query: 550 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGD 714
+HEK ++ LL++ S+ PG +TI+F + + ++R++ ++ + +HG+
Sbjct: 636 QHEKAERIVELLKK--DSKSPG-QTIVFCNSASSCDWLARHLEQHNLSLIRLHGN 687
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 436
TPGR+ +E+ + +LDEAD++LD F+ QI I + ++Q + +SAT+P
Sbjct: 138 TPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYP 197
Query: 437 KEVKKLAEDYLGD--YIQIN 490
+ + + Y+ + ++++N
Sbjct: 198 EVLANHLKKYMTEPTFVRLN 217
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G H +
Sbjct: 58 KSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLA 112
Query: 180 NTCVFGGAPKREQARDLE 233
GG E + L+
Sbjct: 113 CKVFIGGISLEEDKKALK 130
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 140
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 141 QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 254
+ V+ + GG +Q R L++ EIV+
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVV 273
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 284 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 394
EK +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 331 EKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/84 (35%), Positives = 41/84 (48%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 183 TCVFGGAPKREQARDLERGVEIVI 254
+ GG QA L + I+I
Sbjct: 64 AVIVGGIDMMSQALMLAKKPHIII 87
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +2
Query: 254 STPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQ 370
+TPGRLID LE KG + L+ YLV+DEADR+L+M FE +
Sbjct: 88 ATPGRLIDHLENTKGFS-LRTLKYLVMDEADRILNMDFEKE 127
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 182
+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382
Query: 183 TCVFGG 200
+ + GG
Sbjct: 383 SVILGG 388
Score = 27.5 bits (58), Expect(2) = 0.43
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADR 343
+TPGR + + + L Y+V DEADR
Sbjct: 393 ATPGRFLHVVMEMELKLSSVEYVVFDEADR 422
Score = 23.4 bits (48), Expect(2) = 0.43
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 401 DRQTLMWSATWPK 439
DRQTL++SAT P+
Sbjct: 421 DRQTLLFSATLPR 433
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = +3
Query: 90 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 251
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIV 57
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +2
Query: 254 STPGRLIDFL--EKGTTNLQRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQTL 415
+TP RL+ L E L +L+LDEAD++ + GF QI I + +PD
Sbjct: 262 TTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRG 321
Query: 416 MWSATWPKEVKKLAEDYLGDYIQINIG 496
++SAT +++ A +L +++++ +G
Sbjct: 322 LFSATLSNGIEEWAGLHLDNHVRVTVG 348
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 475 LHSDQYRIITTSANHNILQIVD--ICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKR 648
LH D + +T ++ VD + ++ KL + + + P +IFV++K
Sbjct: 337 LHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAVRDIVQKGFTP--PVLIFVQSKD 394
Query: 649 KAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQF 753
+A+ + + G +H D+TQ +RD ++ F
Sbjct: 395 RAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSF 429
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 30 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 137
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 176
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
R +FGG + ++ L G E+++
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCEVLV 319
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 394
TPG+L DF+ +L + + +LDEAD +L G I KI +I
Sbjct: 142 TPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 284 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 394
E+ +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR 179
Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +++
Sbjct: 150 QSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHIK 204
Query: 180 -NTCVFGGA-PKREQARD 227
N V G P+ ++ D
Sbjct: 205 INYAVRGNQFPRGQKCTD 222
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 35.5 bits (78), Expect = 0.047
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 517 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 696
H + Q +++EK KL LL + +Q IIFV++ ++ +S + + +PA
Sbjct: 308 HGLQQYYVKLKDNEKNRKLFDLLDLLEFNQ-----VIIFVKSVQRCTALSHLLLKQNFPA 362
Query: 697 VCMHGDKTQQERDEVLYQF 753
+C+H Q+ER QF
Sbjct: 363 ICIHRGMKQEERLARYQQF 381
Score = 34.7 bits (76), Expect = 0.082
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 352
TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 174 TPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 34.7 bits (76), Expect = 0.082
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 352
TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 174 TPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 176
+TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 205 ETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 6 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 134
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 320 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 409
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 353 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 493
MGFE I I+ + R+T ++SAT EV+ L L + +++ +
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV 47
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 239 SRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQTL 415
+R + T G L+ + E +T L +++V+DE +R + F + + + RPD + +
Sbjct: 70 TRLLYCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVI 128
Query: 416 MWSATWPKEVKKLAEDYLGDYIQINIGSLQLP 511
+ SAT KL +Y D I+I P
Sbjct: 129 LMSATLD---SKLFSEYFYDAPVIHIPGRTFP 157
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 302 LQRCTYLVLDEADRMLDMGFEPQIRKII 385
LQRC LVLDEA +D + Q++++I
Sbjct: 1219 LQRCKVLVLDEATANVDYRTDRQVQQLI 1246
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 302 LQRCTYLVLDEADRMLDMGFEPQIRKII 385
LQRC LVLDEA +D + Q++++I
Sbjct: 984 LQRCKVLVLDEATANVDYRTDRQVQQLI 1011
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 266 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 397
R + LEKG + LDEAD+M+D F R+++E I+
Sbjct: 372 RQLRHLEKGKETCDQ----KLDEADKMIDAYFREMQRRLMEDIK 411
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 613 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 744
G II+ +++ AE ++ + G A C H D + R +V+
Sbjct: 313 GDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQVV 356
>SB_26411| Best HMM Match : GAS2 (HMM E-Value=2.3)
Length = 360
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 224 GLGEGSRNSHSTPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRP 400
G+ + S ++ +LI LE T ++ LV + L + G E QI +
Sbjct: 223 GMNKASEPVNTKTAQLIQNLELITDTSKQMDRLV----EHYLGVYGTEKQICGTLPGSIW 278
Query: 401 DRQTLMWSATWP--KEVKKLAEDYLGDY 478
DR+T W+ TW + +L E YLG Y
Sbjct: 279 DRETDWWNTTWEYMGQRNRLVEHYLGVY 306
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,814,538
Number of Sequences: 59808
Number of extensions: 528588
Number of successful extensions: 1381
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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