Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0456
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    86   1e-18
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 86.2 bits (204), Expect = 1e-18
 Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
 Frame = +2

Query: 254 STPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMW 421
           +TPGRL+DF+++G    +   ++VLDEADRMLDMGF P I K++       +  RQTLM+
Sbjct: 305 ATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMF 364

Query: 422 SATWPKEVKKLAEDYLGDYIQINIG 496
           SAT+P E+++LA  +L +YI + +G
Sbjct: 365 SATFPAEIQELAGKFLHNYICVFVG 389



 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +3

Query: 3   QTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 176
           QTGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + +
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKL 278

Query: 177 RNTCVFGGAPKREQARDLERGVEIVI 254
           +    +GG   + Q + +  G  +++
Sbjct: 279 KVCVSYGGTAVQHQLQLMRGGCHVLV 304



 Score = 48.0 bits (109), Expect = 3e-07
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +1

Query: 499 ITTSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIR 678
           I   A  ++ Q + + ++ +K  KL    +EI     P   T++FVETKR A+ ++  + 
Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-TLVFVETKRNADYLASLMS 444

Query: 679 RYGWPAVCMHGDKTQQERDEVLYQF 753
              +P   +HGD+ Q+ER+  LY F
Sbjct: 445 ETQFPTTSIHGDRLQREREMALYDF 469


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 269 LIDFLEKGTTNLQRCTYLVLDEADR 343
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,869
Number of Sequences: 2352
Number of extensions: 18703
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)