BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0454 (621 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 144 9e-36 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 143 2e-35 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 120 1e-28 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 1e-25 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 69 4e-13 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 63 3e-11 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 58 8e-10 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 1e-09 SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.8 SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 3.8 SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 25 6.7 SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 25 6.7 SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.7 SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 6.7 SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 8.8 SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 8.8 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 144 bits (349), Expect = 9e-36 Identities = 70/84 (83%), Positives = 78/84 (92%) Frame = +3 Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182 AKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA Sbjct: 268 AKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKA 327 Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254 +++IVLVGGSTRIP+VQKL+ DF Sbjct: 328 SVNEIVLVGGSTRIPRVQKLVSDF 351 Score = 76.6 bits (180), Expect = 3e-15 Identities = 43/95 (45%), Positives = 48/95 (50%) Frame = +2 Query: 224 PQGAEAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 403 P+ + + F NGKE KSINPDE +L GD SE+ QD GI Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401 Query: 404 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGV 508 ETAGGVMT LIKRN YSDNQPGV Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGV 436 Score = 74.1 bits (174), Expect = 1e-14 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = +1 Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621 +IQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEV Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEV 474 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 143 bits (346), Expect = 2e-35 Identities = 68/84 (80%), Positives = 79/84 (94%) Frame = +3 Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182 AKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ Sbjct: 268 AKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKS 327 Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254 +++IVLVGGSTRIP++QKL+ DF Sbjct: 328 SVNEIVLVGGSTRIPRIQKLVSDF 351 Score = 74.9 bits (176), Expect = 8e-15 Identities = 42/86 (48%), Positives = 44/86 (51%) Frame = +2 Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430 F NGKE KSINPDE IL GD SE+ QD GIETAGGVMT Sbjct: 351 FFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTP 410 Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGV 508 LIKRN Y+DNQPGV Sbjct: 411 LIKRNTTIPTKKSEVFSTYADNQPGV 436 Score = 74.1 bits (174), Expect = 1e-14 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = +1 Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621 +IQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEV Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEV 474 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 120 bits (290), Expect = 1e-28 Identities = 56/89 (62%), Positives = 73/89 (82%) Frame = +3 Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182 AKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA Sbjct: 272 AKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKA 331 Query: 183 QIHDIVLVGGSTRIPKVQKLLQDFLMERS 269 +HDIVLVGGSTRIPKVQ+L+ DF R+ Sbjct: 332 DVHDIVLVGGSTRIPKVQRLVSDFFDGRA 360 Score = 44.8 bits (101), Expect = 1e-05 Identities = 18/34 (52%), Positives = 25/34 (73%) Frame = +1 Query: 517 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 618 V++GER +N LG+F+LTGIPP PRG ++E Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPPMPRGQAELE 478 Score = 35.9 bits (79), Expect = 0.005 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Frame = +2 Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMT 427 F +G+ LNKSINPDE +L + S++ QD G+ G V Sbjct: 355 FFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFG 414 Query: 428 TLIKRNXXXXXXXXXXXXXYSDNQPGVS 511 + RN +DNQ V+ Sbjct: 415 VVCPRNTPIPTIKKRTFTTVADNQTTVT 442 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 111 bits (266), Expect = 1e-25 Identities = 51/93 (54%), Positives = 72/93 (77%) Frame = +3 Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182 AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K+ Sbjct: 300 AKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKS 359 Query: 183 QIHDIVLVGGSTRIPKVQKLLQDFLMERSSTNL 281 +I DIVLVGGSTRIPKVQ+LL+ F +++S + Sbjct: 360 EIDDIVLVGGSTRIPKVQELLESFFGKKASKGI 392 Score = 74.1 bits (174), Expect = 1e-14 Identities = 32/38 (84%), Positives = 36/38 (94%) Frame = +1 Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621 +IQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEV Sbjct: 466 LIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEV 503 Score = 40.3 bits (90), Expect = 2e-04 Identities = 23/62 (37%), Positives = 30/62 (48%) Frame = +2 Query: 260 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 439 GK+ +K INPDE +L G++ + + GIET GGVMT LI Sbjct: 385 GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIG 442 Query: 440 RN 445 RN Sbjct: 443 RN 444 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 69.3 bits (162), Expect = 4e-13 Identities = 32/84 (38%), Positives = 55/84 (65%) Frame = +3 Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185 K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++ Sbjct: 305 KHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSE 364 Query: 186 IHDIVLVGGSTRIPKVQKLLQDFL 257 I+ I+L GG++RIP +Q L D++ Sbjct: 365 INSIILFGGASRIPFIQSTLADYV 388 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 63.3 bits (147), Expect = 3e-11 Identities = 29/88 (32%), Positives = 52/88 (59%) Frame = +3 Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185 KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+ Sbjct: 295 KRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFD 354 Query: 186 IHDIVLVGGSTRIPKVQKLLQDFLMERS 269 I +++L GG++ PK+ L++ E++ Sbjct: 355 ISEVILAGGASNTPKLTSLMESIFPEQT 382 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 58.4 bits (135), Expect = 8e-10 Identities = 24/37 (64%), Positives = 31/37 (83%) Frame = +1 Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621 I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV Sbjct: 481 IRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEV 517 Score = 54.8 bits (126), Expect = 1e-08 Identities = 22/50 (44%), Positives = 40/50 (80%) Frame = +3 Query: 84 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 233 I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRV 392 Score = 36.3 bits (80), Expect = 0.004 Identities = 23/61 (37%), Positives = 27/61 (44%) Frame = +2 Query: 263 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 442 +E KS+NPDE +L G V+D GIET GGV T LI R Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457 Query: 443 N 445 N Sbjct: 458 N 458 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 57.6 bits (133), Expect = 1e-09 Identities = 27/83 (32%), Positives = 49/83 (59%) Frame = +3 Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185 K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K Sbjct: 277 KKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKED 336 Query: 186 IHDIVLVGGSTRIPKVQKLLQDF 254 ++ I +VGG TR+P V++++ ++ Sbjct: 337 LYSIEMVGGCTRVPIVKEVIANY 359 >SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 932 Score = 26.2 bits (55), Expect = 3.8 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -1 Query: 192 RGFEPYPSWHHGETSPLAP 136 + +P P+ HG+TSPL+P Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438 >SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr 2|||Manual Length = 538 Score = 26.2 bits (55), Expect = 3.8 Identities = 19/74 (25%), Positives = 35/74 (47%) Frame = +3 Query: 51 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 230 SL G+D+YT I E +A +S+ E +K D + D++ D + VG + Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVGSIAAGGR 387 Query: 231 VQKLLQDFLMERSS 272 L+ F ++++ Sbjct: 388 YDNLVGMFAAKKNA 401 >SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C |Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 25.4 bits (53), Expect = 6.7 Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = +3 Query: 441 VTLPSPLNRLRHSPPTLI-TNPEYHPSI 521 +++ P N +SPPT+I T+P +HP++ Sbjct: 80 ISMSFPAN-YPYSPPTIIFTSPMWHPNV 106 >SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr 3|||Manual Length = 828 Score = 25.4 bits (53), Expect = 6.7 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = -3 Query: 331 DSSLDSCTISYGLVRVNRFVELLSIKKSCRSFCTLGIRVEPPTSTI 194 DS + C S+ + + L + ++ CTL I + PTST+ Sbjct: 472 DSDVMDCCFSFLASILTHSIALPRLLRTKIDLCTLQISLSNPTSTV 517 >SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 515 Score = 25.4 bits (53), Expect = 6.7 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -3 Query: 304 SYGLVRVNRFV-ELLSIKKSCRSFCTLGIRVEPPTSTIS 191 SY L N+++ ++S SC + LG + E +TIS Sbjct: 242 SYALNESNQYITSIVSPDSSCENIRILGFKAETNAATIS 280 >SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces pombe|chr 1|||Manual Length = 591 Score = 25.4 bits (53), Expect = 6.7 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = +1 Query: 118 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 207 ICS LP + W + S PR+ R S ++ WW Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166 >SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 404 Score = 25.0 bits (52), Expect = 8.8 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -3 Query: 292 VRVNRFVELLSIKKSCRS 239 VR+ RF+EL+ KK C++ Sbjct: 195 VRLQRFIELIKSKKLCQA 212 >SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotransferase Eca39|Schizosaccharomyces pombe|chr 2|||Manual Length = 380 Score = 25.0 bits (52), Expect = 8.8 Identities = 8/32 (25%), Positives = 16/32 (50%) Frame = -2 Query: 602 PRGAGGIPVSSNLPSKLLSLVIARSPSNTWMI 507 P G P++S + +L + + P+N W + Sbjct: 345 PEGQEAGPITSEISKWILDIQYGKEPNNPWSV 376 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,559,226 Number of Sequences: 5004 Number of extensions: 50539 Number of successful extensions: 173 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 172 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 273658928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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