Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0454
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 138 3e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 131 5e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 117 9e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 72 3e-13
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 65 5e-11
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.7
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 2.3
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 29 3.0
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_53478| Best HMM Match : GASA (HMM E-Value=0.44) 28 5.3
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 5.3
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 7.0
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 138 bits (334), Expect = 3e-33
Identities = 68/85 (80%), Positives = 77/85 (90%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--D 176
AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+
Sbjct: 270 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGG 329
Query: 177 KAQIHDIVLVGGSTRIPKVQKLLQD 251
K IHDIVLVGGSTRIPK+QK+LQ+
Sbjct: 330 KESIHDIVLVGGSTRIPKIQKMLQE 354
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +2
Query: 260 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 439
GKELNKSINPDE ILHGDK + V+D GIETAGGVM+ LIK
Sbjct: 358 GKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIK 417
Query: 440 RNXXXXXXXXXXXXXYSDNQPGV 508
RN YSDNQPGV
Sbjct: 418 RNSTIPTKQTQTFTTYSDNQPGV 440
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +1
Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
+IQVFEGER+MT NNLLGKFELTGIPPAPRGVPQIEV
Sbjct: 441 LIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEV 478
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 133 bits (322), Expect = 1e-31
Identities = 63/85 (74%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-K 179
AKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K
Sbjct: 363 AKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESK 422
Query: 180 AQIHDIVLVGGSTRIPKVQKLLQDF 254
+I +IV+VGGSTRIPK+Q LLQ+F
Sbjct: 423 EKIDEIVMVGGSTRIPKIQSLLQNF 447
Score = 80.6 bits (190), Expect = 9e-16
Identities = 43/86 (50%), Positives = 44/86 (51%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
F NGKELNKSINPDE ILHGDKSE QD G+ETAGGVMT
Sbjct: 447 FFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTA 506
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGV 508
IKRN YSDNQ V
Sbjct: 507 AIKRNTTIPTKQTQTFTTYSDNQTSV 532
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1
Query: 499 TRSIIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
T +IQV+EGER++TKDNNLLGKFEL+GIPPAPRGVPQI+V
Sbjct: 530 TSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDV 570
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 131 bits (316), Expect = 5e-31
Identities = 59/89 (66%), Positives = 77/89 (86%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+
Sbjct: 271 AKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKS 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDFLMERS 269
IH++VLVGGSTR+PK+QK+L+++ +S
Sbjct: 331 DIHEVVLVGGSTRVPKIQKMLEEYFSGKS 359
Score = 74.1 bits (174), Expect = 8e-14
Identities = 40/87 (45%), Positives = 46/87 (52%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
+ +GK LNKSINPDE IL GDKS+EV+D GIETAG VMT
Sbjct: 354 YFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTK 413
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI+RN YSDNQP V+
Sbjct: 414 LIERNARIPTKATQTFTTYSDNQPAVT 440
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
I+VFEGER +TK NNLLGKF+L+GIPPAPRGVPQIEV
Sbjct: 441 IRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEV 477
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 117 bits (281), Expect = 9e-27
Identities = 55/84 (65%), Positives = 70/84 (83%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K+
Sbjct: 967 AKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKS 1026
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+IH+IVLVGGSTRIPKVQ+L++DF
Sbjct: 1027 EIHEIVLVGGSTRIPKVQQLVKDF 1050
Score = 70.9 bits (166), Expect = 8e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQVFEGER MTKDN+ LGKF+L GIPPAPRGVPQIEV
Sbjct: 1135 IQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEV 1171
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/87 (33%), Positives = 37/87 (42%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
F GKE ++ INPDE +L G+ E+ + GIET GGVMT
Sbjct: 1050 FFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTK 1107
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN +DNQ V+
Sbjct: 1108 LISRNTVIPTKKSQVFSTAADNQNTVT 1134
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/89 (37%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 AKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 167
AK L+ + + +I++ SL EG + F +I+R FE +N DLF+ ++P+ + L +
Sbjct: 298 AKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEV 357
Query: 168 KMDKAQIHDIVLVGGSTRIPKVQKLLQDF 254
++ K ++ ++VLVGGSTR+PK+++L+Q+F
Sbjct: 358 ELPKEEVDEVVLVGGSTRVPKIRQLIQEF 386
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185
K+ LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M
Sbjct: 255 KQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMND 314
Query: 186 IHDIVLVGGSTRIPKVQKLL 245
I +VLVGG R+PKVQ L
Sbjct: 315 IDSVVLVGGGIRVPKVQDAL 334
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 170
AK LSSS Q I + + ++R++FE L ADL T+ P +K L+DA+
Sbjct: 77 AKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDAE 136
Query: 171 MDKAQIHDIVLVGGSTRIPKVQKLLQD 251
++K +I D++LVGG TR+PKVQ+ +QD
Sbjct: 137 INKGEIGDVLLVGGMTRMPKVQQTVQD 163
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 499 TRSIIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
T+ I+VF+GER M DN LLG+F+L GIPPAPRGVPQ+EV
Sbjct: 242 TQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEV 282
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/86 (31%), Positives = 34/86 (39%)
Frame = +2
Query: 260 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 439
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 166 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 221
Query: 440 RNXXXXXXXXXXXXXYSDNQPGVSSK 517
RN +D Q V K
Sbjct: 222 RNTTIPTKKSQVFSTAADGQTQVEIK 247
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/56 (50%), Positives = 44/56 (78%)
Frame = +3
Query: 84 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQD 251
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQD 108
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/86 (31%), Positives = 34/86 (39%)
Frame = +2
Query: 260 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 439
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 111 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 166
Query: 440 RNXXXXXXXXXXXXXYSDNQPGVSSK 517
RN +D Q V K
Sbjct: 167 RNTTIPTKKSQVFSTAADGQTQVEIK 192
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 499 TRSIIQVFEGERAMTKDNNLLGKFEL 576
T+ I+VF+GER M DN LLG+F+L
Sbjct: 187 TQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 KRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
K+ +S++T + I I+ E D + + RA+FEEL ADL + P+ +L A+ K
Sbjct: 331 KKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKY 388
Query: 183 QIHDIV 200
+ ++V
Sbjct: 389 SVKNVV 394
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/30 (36%), Positives = 24/30 (80%)
Frame = +3
Query: 171 MDKAQIHDIVLVGGSTRIPKVQKLLQDFLM 260
+ ++ + ++LVGG+TR PK+Q+LL+++ +
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFV 64
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -3
Query: 454 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 320
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -3
Query: 400 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIK 254
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAK 57
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITR 92
K LS+ A+ +DSL EGIDF ++R
Sbjct: 237 KNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +3
Query: 78 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFL 257
T ++ARF++ DL T++P+ ++++ D + +++ G K + L ++ L
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAE----KARLLAEETL 231
Query: 258 MERSSTNLL 284
++ N L
Sbjct: 232 VQPCQRNTL 240
>SB_53478| Best HMM Match : GASA (HMM E-Value=0.44)
Length = 136
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 463 FSGDGSVTLDECGHDTSSSLNTEGKGCYI----KQQQILHLLRLVTVQDSSLDSCTISYG 296
F DG V DE G DT + K + K ++ ++ L+ +Q ++ C YG
Sbjct: 13 FDNDGDV--DENGDDTEDDDDDYKKILMVTMMMKMLLMMMIMMLMIIQITNPKKCRARYG 70
Query: 295 LVRVNRFVELLSIKKSCRSF 236
L R + + + KK C F
Sbjct: 71 LDRQHEWCKPCRRKKKCVRF 90
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 596 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 510
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 45 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 164
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 447 LPSPLNRLRHSPPTLITNP 503
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDFLMERSSTNL 281
+I + +VGGSTRIP ++ ++++ + T +
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVFGKELMTTM 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,065,539
Number of Sequences: 59808
Number of extensions: 425256
Number of successful extensions: 3490
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3487
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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