BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0454
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 155 2e-38
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 151 5e-37
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 137 7e-33
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 136 1e-32
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 136 1e-32
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 116 2e-26
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 111 3e-25
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 111 3e-25
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 74 7e-14
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 74 7e-14
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 66 1e-11
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 63 1e-10
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 61 5e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 57 9e-09
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 30 1.5
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 2.0
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 29 2.0
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 28 4.7
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 28 4.7
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 27 8.2
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 27 8.2
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 155 bits (377), Expect = 2e-38
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKRTLSSS+QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+
Sbjct: 271 AKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKS 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQD 251
Q+HDIVLVGGSTRIPKVQKLL D
Sbjct: 331 QVHDIVLVGGSTRIPKVQKLLSD 353
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/84 (53%), Positives = 46/84 (54%)
Frame = +2
Query: 257 NGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLI 436
+GKELNKSINPDE IL GDKSE VQD GIETAGGVMT LI
Sbjct: 356 SGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALI 415
Query: 437 KRNXXXXXXXXXXXXXYSDNQPGV 508
KRN YSDNQPGV
Sbjct: 416 KRNTTIPTKTAQTFTTYSDNQPGV 439
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
+IQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEV
Sbjct: 440 LIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEV 477
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 151 bits (365), Expect = 5e-37
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
A TLSSS QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+
Sbjct: 271 ANETLSSSCQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKS 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQD 251
Q+HDIVLVGGSTRIPKVQKLL D
Sbjct: 331 QVHDIVLVGGSTRIPKVQKLLSD 353
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/84 (53%), Positives = 46/84 (54%)
Frame = +2
Query: 257 NGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLI 436
+GKELNKSINPDE IL GDKSE VQD GIETAGGVMT LI
Sbjct: 356 SGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALI 415
Query: 437 KRNXXXXXXXXXXXXXYSDNQPGV 508
KRN YSDNQPGV
Sbjct: 416 KRNTTIPTKTAQTFTTYSDNQPGV 439
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 508 IIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
+IQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEV
Sbjct: 440 LIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEV 477
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 137 bits (331), Expect = 7e-33
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKRTLSSST+A++E+DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDAK DK
Sbjct: 271 AKRTLSSSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKTDKG 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+I ++VLVGGSTRIPK+QKLL++F
Sbjct: 331 RIDEVVLVGGSTRIPKIQKLLKEF 354
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/87 (43%), Positives = 44/87 (50%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
F NGK+LN SINPDE +L G K + ++D GIETAGGVMT
Sbjct: 354 FFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTN 413
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN Y+DNQPGVS
Sbjct: 414 LIDRNTRIPAKASKTFTTYADNQPGVS 440
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQV+EGERAMT+DN+ LG FELTGIPPAPRGVPQ++V
Sbjct: 441 IQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDV 477
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 136 bits (329), Expect = 1e-32
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK+
Sbjct: 271 AKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKS 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+I ++VLVGGSTR+PK+QKLL+DF
Sbjct: 331 KIDEVVLVGGSTRVPKIQKLLKDF 354
Score = 74.1 bits (174), Expect = 7e-14
Identities = 40/87 (45%), Positives = 44/87 (50%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
F NGKELN SINPDE +L G K E ++D GIETAGGVMT
Sbjct: 354 FFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTN 413
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN Y+DNQPGVS
Sbjct: 414 LIDRNTRIPTKACKTFTTYADNQPGVS 440
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEV
Sbjct: 441 IQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEV 477
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 136 bits (329), Expect = 1e-32
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK+
Sbjct: 271 AKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKS 330
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+I ++VLVGGSTR+PK+QKLL+DF
Sbjct: 331 KIDEVVLVGGSTRVPKIQKLLKDF 354
Score = 74.1 bits (174), Expect = 7e-14
Identities = 40/87 (45%), Positives = 44/87 (50%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
F NGKELN SINPDE +L G K E ++D GIETAGGVMT
Sbjct: 354 FFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTN 413
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN Y+DNQPGVS
Sbjct: 414 LIDRNTRIPTKACKTFTTYADNQPGVS 440
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEV
Sbjct: 441 IQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEV 477
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 116 bits (278), Expect = 2e-26
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKR LS+ Q IEI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M K
Sbjct: 297 AKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKT 356
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+H+IVLVGGSTRIPKVQ+L++D+
Sbjct: 357 DVHEIVLVGGSTRIPKVQQLIKDY 380
Score = 61.3 bits (142), Expect = 5e-10
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
I ++EGER M DN+ LG F++TGIPPAPRGVPQIEV
Sbjct: 465 IVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEV 501
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/87 (33%), Positives = 36/87 (41%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
+ NGKE ++ INPDE ++ G E D GIET GGVMT
Sbjct: 380 YFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTK 437
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN +D+Q VS
Sbjct: 438 LIGRNTVIPTKKSQVFSTAADSQSAVS 464
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 111 bits (268), Expect = 3e-25
Identities = 50/84 (59%), Positives = 69/84 (82%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K
Sbjct: 300 AKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKD 359
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+H+IVLVGGSTRIPKVQ+L+++F
Sbjct: 360 DVHEIVLVGGSTRIPKVQQLIKEF 383
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEV
Sbjct: 468 IQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEV 504
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/96 (32%), Positives = 42/96 (43%)
Frame = +2
Query: 224 PQGAEAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 403
P+ + F NGKE ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 404 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVS 511
ET GGVMT LI RN +DNQP V+
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVT 467
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 111 bits (268), Expect = 3e-25
Identities = 50/84 (59%), Positives = 69/84 (82%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K
Sbjct: 300 AKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKD 359
Query: 183 QIHDIVLVGGSTRIPKVQKLLQDF 254
+H+IVLVGGSTRIPKVQ+L+++F
Sbjct: 360 DVHEIVLVGGSTRIPKVQQLIKEF 383
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEV
Sbjct: 468 IQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEV 504
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/96 (32%), Positives = 42/96 (43%)
Frame = +2
Query: 224 PQGAEAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 403
P+ + F NGKE ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 404 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVS 511
ET GGVMT LI RN +DNQP V+
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVT 467
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AK TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+
Sbjct: 267 AKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKS 326
Query: 183 QIHDIVLVGGSTRIPKVQKLLQ 248
QI++IVLVGGSTRIP ++ +++
Sbjct: 327 QINEIVLVGGSTRIPILKNIIK 348
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
+ V+EGER + N LG+ L I P RG +++
Sbjct: 436 VPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDI 471
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 182
AK TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+
Sbjct: 267 AKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKS 326
Query: 183 QIHDIVLVGGSTRIPKVQKLLQ 248
QI++IVLVGGSTRIP ++ +++
Sbjct: 327 QINEIVLVGGSTRIPILKNIIK 348
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
+ V+EGER + N LG+ L I P RG +++
Sbjct: 436 VPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDI 471
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 170
AK LSS+TQ I + + +TRA+FE++ DL + T+EP K+L DA+
Sbjct: 294 AKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRKALHDAE 353
Query: 171 MDKAQIHDIVLVGGSTRIPKVQKLLQD 251
+ +QI D++LVGG +R+PKVQ +Q+
Sbjct: 354 VKSSQIADVLLVGGMSRMPKVQATVQE 380
Score = 61.3 bits (142), Expect = 5e-10
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 499 TRSIIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
T+ I+VF+GER M N LLG+F L GIPPAPRGVPQ+EV
Sbjct: 459 TQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEV 499
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/94 (30%), Positives = 38/94 (40%)
Frame = +2
Query: 236 EAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAG 415
+A + + GK +K++NPDE +L GD V D GIET G
Sbjct: 375 QATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLG 430
Query: 416 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVSSK 517
G+MT LI RN +D Q V K
Sbjct: 431 GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIK 464
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 AKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 170
AK LSS+TQ I + + +TRA+FE++ DL + T+EP L DA+
Sbjct: 294 AKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRNVLHDAE 353
Query: 171 MDKAQIHDIVLVGGSTRIPKVQKLLQD 251
+ +QI D++LVGG +R+PKVQ +Q+
Sbjct: 354 VKSSQIADVLLVGGMSRMPKVQATVQE 380
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/94 (30%), Positives = 38/94 (40%)
Frame = +2
Query: 236 EAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAG 415
+A + + GK +K++NPDE +L GD V D GIET G
Sbjct: 375 QATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLG 430
Query: 416 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVSSK 517
G+MT LI RN +D Q V K
Sbjct: 431 GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIK 464
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 499 TRSIIQVFEGERAMTKDNNLLGKFELTGI 585
T+ I+VF+GER M N LLG+F L GI
Sbjct: 459 TQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 61.3 bits (142), Expect = 5e-10
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 511 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 621
I ++EGER M DN+ LG F++TGIPPAPRGVPQIEV
Sbjct: 96 IVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEV 132
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/87 (33%), Positives = 36/87 (41%)
Frame = +2
Query: 251 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 430
+ NGKE ++ INPDE ++ G E D GIET GGVMT
Sbjct: 11 YFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTK 68
Query: 431 LIKRNXXXXXXXXXXXXXYSDNQPGVS 511
LI RN +D+Q VS
Sbjct: 69 LIGRNTVIPTKKSQVFPTAADSQSAVS 95
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +3
Query: 84 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFLME 263
+TR FE LN DL ++ P+ +L DA +D A + +IVLVGGST++P V+K++ F +
Sbjct: 329 LTRDEFETLNGDLLKAIELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFKK 388
Query: 264 RSS 272
++
Sbjct: 389 SAN 391
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185
K+ LS++ + +I+S E ID +TR F L +D+ EP+E++LR A++
Sbjct: 306 KQVLSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDMESRFGEPIEQALRMAQIPIDD 365
Query: 186 IHDIVLVGGSTRIPKVQKLLQ 248
I VL+G TR+PKVQ+++Q
Sbjct: 366 IDQFVLMGAGTRVPKVQEIVQ 386
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/93 (30%), Positives = 53/93 (56%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185
K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 293 KQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTND 352
Query: 186 IHDIVLVGGSTRIPKVQKLLQDFLMERSSTNLL 284
I +VL+G TR+PKV+++L+ L ++ +N L
Sbjct: 353 IDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 385
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/93 (30%), Positives = 53/93 (56%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185
K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 309 KQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTND 368
Query: 186 IHDIVLVGGSTRIPKVQKLLQDFLMERSSTNLL 284
I +VL+G TR+PKV+++L+ L ++ +N L
Sbjct: 369 IDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 401
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 6 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 185
K+ ++ T + I+ E D + R FE+L A +F + + D K +
Sbjct: 277 KQMSANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNRIKQVLINLFADGVSIKPE 336
Query: 186 -IHDIVLVGGSTRIPKVQKLLQDFLMERSSTNL 281
I +I +VGGS+RIP ++++++D + T +
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLFGKEPKTTM 369
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 502 GLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCYIKQQQILHLLR 347
G V+R GG +SLFS L+ GH +SS L E G +K +Q+L+ R
Sbjct: 223 GCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQRVKVKQVLYRCR 270
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
C01B9.1b protein.
Length = 1671
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = -3
Query: 472 LSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGL 293
LSL S D + + + T + + GC +K ++ R +++ ++ T L
Sbjct: 1370 LSLSSDDAKLCIRQFNSHTIFHYSPQPIGCKLKITELTQFGRFQSMRQLNMTDDTYINYL 1429
Query: 292 VRVNRFVELLSIKKSCRSFCTLGIRVE 212
+R+ +++ L ++ C +F T G+ E
Sbjct: 1430 MRILQYI--LRDQRDCLNFFTYGLHFE 1454
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
C01B9.1a protein.
Length = 1601
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = -3
Query: 472 LSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGL 293
LSL S D + + + T + + GC +K ++ R +++ ++ T L
Sbjct: 1300 LSLSSDDAKLCIRQFNSHTIFHYSPQPIGCKLKITELTQFGRFQSMRQLNMTDDTYINYL 1359
Query: 292 VRVNRFVELLSIKKSCRSFCTLGIRVE 212
+R+ +++ L ++ C +F T G+ E
Sbjct: 1360 MRILQYI--LRDQRDCLNFFTYGLHFE 1384
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 566 LPSKLLSLVIARSPSNTWMILR 501
+P+K+L+L I RSPS W +++
Sbjct: 26 IPTKMLALQIQRSPSTIWKVIK 47
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 566 LPSKLLSLVIARSPSNTWMILR 501
+P+K+L+L I RSPS W +++
Sbjct: 26 IPTKMLALQIQRSPSTIWKVIK 47
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 566 LPSKLLSLVIARSPSNTWMILR 501
+P+K+L+L I RSPS W +++
Sbjct: 26 IPTKMLALQIQRSPSTIWKVIK 47
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = -1
Query: 273 LSSFPLRNLAGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPLAPW 133
L P AS WS P R P +W G T+P + W
Sbjct: 444 LKMLPAHKSPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = -1
Query: 273 LSSFPLRNLAGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPLAPW 133
L P AS WS P R P +W G T+P + W
Sbjct: 442 LKMLPAHKSPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGSSW 488
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 161
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 374 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 423
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 161
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 438 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 487
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 384 HPFPSVLRLLEVS*PHSSSVTLPSPLNRLRHSPPTLITNPEYHPS 518
HPF +L +L P +S+ LP PL L S P +++P+
Sbjct: 571 HPFEQLLAVL----PEASADCLPRPLRELMSSDPAKSPICDFYPA 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,590
Number of Sequences: 27780
Number of extensions: 291009
Number of successful extensions: 802
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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