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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0452
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC072016-1|AAH72016.1|  466|Homo sapiens citrate synthase protein.    155   1e-37
BC010106-1|AAH10106.1|  466|Homo sapiens CS protein protein.          155   1e-37
BC000105-1|AAH00105.3|  409|Homo sapiens CS protein protein.          155   1e-37
AK074956-1|BAC11314.1|  466|Homo sapiens protein ( Homo sapiens ...   155   1e-37
AF053631-1|AAQ13428.1|  466|Homo sapiens citrate synthase protein.    155   1e-37
AF047042-1|AAC25560.1|  466|Homo sapiens citrate synthase protein.    154   2e-37
BX538112-1|CAD98024.1|  690|Homo sapiens hypothetical protein pr...    33   0.60 
BC101722-1|AAI01723.1|  690|Homo sapiens highly divergent homeob...    33   0.60 
BC101720-1|AAI01721.1|  690|Homo sapiens highly divergent homeob...    33   0.60 
AL035552-2|CAI42056.1|  632|Homo sapiens chromosome X open readi...    33   0.60 
AL022160-2|CAI42096.1|  632|Homo sapiens chromosome X open readi...    33   0.60 
AK055240-1|BAB70886.1|  632|Homo sapiens protein ( Homo sapiens ...    33   0.60 
BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein FL...    33   0.79 
BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein FL...    33   0.79 
AK023367-1|BAB14544.1|  436|Homo sapiens protein ( Homo sapiens ...    33   0.79 
BC025238-1|AAH25238.1|  120|Homo sapiens family with sequence si...    31   2.4  
BC011054-1|AAH11054.1|  120|Homo sapiens family with sequence si...    31   2.4  
AK074755-1|BAC11183.1|  120|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AK027681-1|BAB55292.1|  120|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.        31   2.4  
AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.     31   2.4  
D32257-1|BAA06988.1|  423|Homo sapiens Xenopus transcription fac...    31   3.2  
X85786-1|CAA59771.1|  616|Homo sapiens binding regulatory factor...    30   5.5  
BC017471-1|AAH17471.1|  616|Homo sapiens regulatory factor X, 5 ...    30   5.5  
AL391069-15|CAM13081.1|  596|Homo sapiens regulatory factor X, 5...    30   5.5  
AL391069-14|CAH70327.1|  616|Homo sapiens regulatory factor X, 5...    30   5.5  
AK223526-1|BAD97246.1|  616|Homo sapiens regulatory factor X, 5 ...    30   5.5  
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot...    30   7.3  
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot...    30   7.3  
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ...    30   7.3  
AF263523-1|AAG28029.1|  871|Homo sapiens vanilloid receptor-rela...    29   9.7  

>BC072016-1|AAH72016.1|  466|Homo sapiens citrate synthase protein.
          Length = 466

 Score =  155 bits (376), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 67  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +1

Query: 52  MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231
           MAL    +  L     +C    +  R  SA  TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1   MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58


>BC010106-1|AAH10106.1|  466|Homo sapiens CS protein protein.
          Length = 466

 Score =  155 bits (376), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 67  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +1

Query: 52  MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231
           MAL    +  L     +C    +  R  SA  TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1   MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58


>BC000105-1|AAH00105.3|  409|Homo sapiens CS protein protein.
          Length = 409

 Score =  155 bits (376), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 10  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 69

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 70  HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 122



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 95  VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 127


>AK074956-1|BAC11314.1|  466|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
           Porcine citrate synthase mRNA. ).
          Length = 466

 Score =  155 bits (376), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 67  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +1

Query: 52  MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231
           MAL    +  L     +C    +  R  SA  TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1   MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58


>AF053631-1|AAQ13428.1|  466|Homo sapiens citrate synthase protein.
          Length = 466

 Score =  155 bits (376), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 67  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +1

Query: 52  MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231
           MAL    +  L     +C    +  R  SA  TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1   MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58


>AF047042-1|AAC25560.1|  466|Homo sapiens citrate synthase protein.
          Length = 466

 Score =  154 bits (374), Expect = 2e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434
           MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG
Sbjct: 67  MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126

Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599
            IPTE Q   LSKEWA RA LP+HV       P N  P   S+L +  + +N  S
Sbjct: 127 CIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179



 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607
           VTML+N P  LHPMSQ SAAVTALNSES FA+A
Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFAQA 184



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +1

Query: 52  MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231
           MAL    +  L     +C    +  R  SA  TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1   MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58


>BX538112-1|CAD98024.1|  690|Homo sapiens hypothetical protein
           protein.
          Length = 690

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426


>BC101722-1|AAI01723.1|  690|Homo sapiens highly divergent homeobox
           protein.
          Length = 690

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426


>BC101720-1|AAI01721.1|  690|Homo sapiens highly divergent homeobox
           protein.
          Length = 690

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426


>AL035552-2|CAI42056.1|  632|Homo sapiens chromosome X open reading
           frame 43 protein.
          Length = 632

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368


>AL022160-2|CAI42096.1|  632|Homo sapiens chromosome X open reading
           frame 43 protein.
          Length = 632

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368


>AK055240-1|BAB70886.1|  632|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30678 fis, clone FCBBF2000094. ).
          Length = 632

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182
           +ASST  S T PL     P+      LRL  N  ++ I G+  VPW
Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368


>BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379
           S   E+ +  ++++   L + RW   + R      CAG    NP P + +P VPT +++G
Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413


>BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379
           S   E+ +  ++++   L + RW   + R      CAG    NP P + +P VPT +++G
Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413


>AK023367-1|BAB14544.1|  436|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13305 fis, clone OVARC1001399. ).
          Length = 436

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379
           S   E+ +  ++++   L + RW   + R      CAG    NP P + +P VPT +++G
Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413


>BC025238-1|AAH25238.1|  120|Homo sapiens family with sequence
           similarity 104, member A protein.
          Length = 120

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289
           S +  PR +RR+ N E + +P +++RS  N V   +W+  S
Sbjct: 2   SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42


>BC011054-1|AAH11054.1|  120|Homo sapiens family with sequence
           similarity 104, member A protein.
          Length = 120

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289
           S +  PR +RR+ N E + +P +++RS  N V   +W+  S
Sbjct: 2   SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42


>AK074755-1|BAC11183.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90274 fis, clone NT2RP1000239. ).
          Length = 120

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289
           S +  PR +RR+ N E + +P +++RS  N V   +W+  S
Sbjct: 2   SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42


>AK027681-1|BAB55292.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14775 fis, clone NT2RP4000185. ).
          Length = 120

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289
           S +  PR +RR+ N E + +P +++RS  N V   +W+  S
Sbjct: 2   SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42


>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
          Length = 4169

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 352  LSANSNCPRLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRSYRLTCDNVEQYA 531
            L  NS+      EK     +F+G      YP  RKLK+  KN   G S+ +  +NVE  +
Sbjct: 3920 LEENSDVTSWSEEKREEKMLFTG------YPEDRKLKKNKKNSHEGVSWFVPVENVESRS 3973

Query: 532  RQ 537
            ++
Sbjct: 3974 KK 3975


>AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.
          Length = 2055

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 352  LSANSNCPRLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRSYRLTCDNVEQYA 531
            L  NS+      EK     +F+G      YP  RKLK+  KN   G S+ +  +NVE  +
Sbjct: 1853 LEENSDVTSWSEEKREEKMLFTG------YPEDRKLKKNKKNSHEGVSWFVPVENVESRS 1906

Query: 532  RQ 537
            ++
Sbjct: 1907 KK 1908


>D32257-1|BAA06988.1|  423|Homo sapiens Xenopus transcription factor
           IIIA homologue protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +1

Query: 376 RLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRS 495
           +L+V+K+   + F G SS  IYPPKRK  + L   Q G S
Sbjct: 367 KLKVKKSREKREF-GLSSQWIYPPKRKQGQGLSLCQNGES 405


>X85786-1|CAA59771.1|  616|Homo sapiens binding regulatory factor
           protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331
           RKR    K+   + ER+  PLKS    E +Q + + W  W    G GN   G     P
Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520


>BC017471-1|AAH17471.1|  616|Homo sapiens regulatory factor X, 5
           (influences HLA class II expression) protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331
           RKR    K+   + ER+  PLKS    E +Q + + W  W    G GN   G     P
Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520


>AL391069-15|CAM13081.1|  596|Homo sapiens regulatory factor X, 5
           (influences HLA class II expression) protein.
          Length = 596

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331
           RKR    K+   + ER+  PLKS    E +Q + + W  W    G GN   G     P
Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520


>AL391069-14|CAH70327.1|  616|Homo sapiens regulatory factor X, 5
           (influences HLA class II expression) protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331
           RKR    K+   + ER+  PLKS    E +Q + + W  W    G GN   G     P
Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520


>AK223526-1|BAD97246.1|  616|Homo sapiens regulatory factor X, 5
           variant protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +2

Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331
           RKR    K+   + ER+  PLKS    E +Q + + W  W    G GN   G     P
Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520


>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein.
          Length = 1998

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 360  QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479
            QQ+     GG E  P+   W  V+    +EA+A A   +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115


>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein.
          Length = 2016

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 360  QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479
            QQ+     GG E  P+   W  V+    +EA+A A   +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115


>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
            V alpha subunit protein.
          Length = 2016

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 360  QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479
            QQ+     GG E  P+   W  V+    +EA+A A   +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115


>AF263523-1|AAG28029.1|  871|Homo sapiens vanilloid receptor-related
           osmotically activated channel protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = +2

Query: 98  KHVRLRQFYFEV*ALNRRI*KVFSRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAW 277
           KH+   Q+   +  + R    VF RK F   +  +        P +    ++N+V W  W
Sbjct: 730 KHIWKLQWATTILDIERSF-PVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRVNEVNWSHW 788

Query: 278 NQRSGLGN 301
           NQ  G+ N
Sbjct: 789 NQNLGIIN 796


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,320,504
Number of Sequences: 237096
Number of extensions: 1643883
Number of successful extensions: 4878
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4875
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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