BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0452 (609 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 155 1e-37 BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 155 1e-37 BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 155 1e-37 AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 155 1e-37 AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 155 1e-37 AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 154 2e-37 BX538112-1|CAD98024.1| 690|Homo sapiens hypothetical protein pr... 33 0.60 BC101722-1|AAI01723.1| 690|Homo sapiens highly divergent homeob... 33 0.60 BC101720-1|AAI01721.1| 690|Homo sapiens highly divergent homeob... 33 0.60 AL035552-2|CAI42056.1| 632|Homo sapiens chromosome X open readi... 33 0.60 AL022160-2|CAI42096.1| 632|Homo sapiens chromosome X open readi... 33 0.60 AK055240-1|BAB70886.1| 632|Homo sapiens protein ( Homo sapiens ... 33 0.60 BC107163-1|AAI07164.1| 551|Homo sapiens hypothetical protein FL... 33 0.79 BC107162-1|AAI07163.1| 551|Homo sapiens hypothetical protein FL... 33 0.79 AK023367-1|BAB14544.1| 436|Homo sapiens protein ( Homo sapiens ... 33 0.79 BC025238-1|AAH25238.1| 120|Homo sapiens family with sequence si... 31 2.4 BC011054-1|AAH11054.1| 120|Homo sapiens family with sequence si... 31 2.4 AK074755-1|BAC11183.1| 120|Homo sapiens protein ( Homo sapiens ... 31 2.4 AK027681-1|BAB55292.1| 120|Homo sapiens protein ( Homo sapiens ... 31 2.4 AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 31 2.4 AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein. 31 2.4 D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription fac... 31 3.2 X85786-1|CAA59771.1| 616|Homo sapiens binding regulatory factor... 30 5.5 BC017471-1|AAH17471.1| 616|Homo sapiens regulatory factor X, 5 ... 30 5.5 AL391069-15|CAM13081.1| 596|Homo sapiens regulatory factor X, 5... 30 5.5 AL391069-14|CAH70327.1| 616|Homo sapiens regulatory factor X, 5... 30 5.5 AK223526-1|BAD97246.1| 616|Homo sapiens regulatory factor X, 5 ... 30 5.5 EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 30 7.3 EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 30 7.3 DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 30 7.3 AF263523-1|AAG28029.1| 871|Homo sapiens vanilloid receptor-rela... 29 9.7 >BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. Length = 466 Score = 155 bits (376), Expect = 1e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 67 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179 Score = 55.2 bits (127), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184 Score = 45.2 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = +1 Query: 52 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231 MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58 >BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. Length = 466 Score = 155 bits (376), Expect = 1e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 67 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179 Score = 55.2 bits (127), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184 Score = 45.2 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = +1 Query: 52 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231 MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58 >BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. Length = 409 Score = 155 bits (376), Expect = 1e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 10 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 69 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 70 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 122 Score = 55.2 bits (127), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 95 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 127 >AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to Porcine citrate synthase mRNA. ). Length = 466 Score = 155 bits (376), Expect = 1e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 67 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179 Score = 55.2 bits (127), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184 Score = 45.2 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = +1 Query: 52 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231 MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58 >AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. Length = 466 Score = 155 bits (376), Expect = 1e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 67 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 127 HIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179 Score = 55.2 bits (127), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFARA 184 Score = 45.2 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = +1 Query: 52 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231 MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58 >AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. Length = 466 Score = 154 bits (374), Expect = 2e-37 Identities = 78/115 (67%), Positives = 86/115 (74%) Frame = +3 Query: 255 MMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTG 434 MMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG Sbjct: 67 MMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTG 126 Query: 435 DIPTEAQAKALSKEWAARAELPAHV*QC*TICPANCIPCHSSRLPSPHSTVNLNS 599 IPTE Q LSKEWA RA LP+HV P N P S+L + + +N S Sbjct: 127 CIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHP--MSQLSAAVTALNSES 179 Score = 54.8 bits (126), Expect = 2e-07 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = +2 Query: 509 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKA 607 VTML+N P LHPMSQ SAAVTALNSES FA+A Sbjct: 152 VTMLDNFPTNLHPMSQLSAAVTALNSESNFAQA 184 Score = 45.2 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = +1 Query: 52 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 231 MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58 >BX538112-1|CAD98024.1| 690|Homo sapiens hypothetical protein protein. Length = 690 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426 >BC101722-1|AAI01723.1| 690|Homo sapiens highly divergent homeobox protein. Length = 690 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426 >BC101720-1|AAI01721.1| 690|Homo sapiens highly divergent homeobox protein. Length = 690 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 381 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 426 >AL035552-2|CAI42056.1| 632|Homo sapiens chromosome X open reading frame 43 protein. Length = 632 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368 >AL022160-2|CAI42096.1| 632|Homo sapiens chromosome X open reading frame 43 protein. Length = 632 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368 >AK055240-1|BAB70886.1| 632|Homo sapiens protein ( Homo sapiens cDNA FLJ30678 fis, clone FCBBF2000094. ). Length = 632 Score = 33.5 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 319 SASSTEVSQTRPLIPRMPPYIIQL*PLRL*WNHASFGIRGSSLVPW 182 +ASST S T PL P+ LRL N ++ I G+ VPW Sbjct: 323 TASSTMYSNTNPLRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPW 368 >BC107163-1|AAI07164.1| 551|Homo sapiens hypothetical protein FLJ13305 protein. Length = 551 Score = 33.1 bits (72), Expect = 0.79 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379 S E+ + ++++ L + RW + R CAG NP P + +P VPT +++G Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413 >BC107162-1|AAI07163.1| 551|Homo sapiens hypothetical protein FLJ13305 protein. Length = 551 Score = 33.1 bits (72), Expect = 0.79 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379 S E+ + ++++ L + RW + R CAG NP P + +P VPT +++G Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413 >AK023367-1|BAB14544.1| 436|Homo sapiens protein ( Homo sapiens cDNA FLJ13305 fis, clone OVARC1001399. ). Length = 436 Score = 33.1 bits (72), Expect = 0.79 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 200 SANSERSMVPLKSERSQLNDVRWHAWNQRSGLGNLCAGCR*RNPFPWSIHP*VPTATAQG 379 S E+ + ++++ L + RW + R CAG NP P + +P VPT +++G Sbjct: 357 SIKREKILADIEADEENLKETRWPYLSPRRKSPVRCAGV---NPVPCNCNPPVPTVSSRG 413 >BC025238-1|AAH25238.1| 120|Homo sapiens family with sequence similarity 104, member A protein. Length = 120 Score = 31.5 bits (68), Expect = 2.4 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289 S + PR +RR+ N E + +P +++RS N V +W+ S Sbjct: 2 SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42 >BC011054-1|AAH11054.1| 120|Homo sapiens family with sequence similarity 104, member A protein. Length = 120 Score = 31.5 bits (68), Expect = 2.4 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289 S + PR +RR+ N E + +P +++RS N V +W+ S Sbjct: 2 SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42 >AK074755-1|BAC11183.1| 120|Homo sapiens protein ( Homo sapiens cDNA FLJ90274 fis, clone NT2RP1000239. ). Length = 120 Score = 31.5 bits (68), Expect = 2.4 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289 S + PR +RR+ N E + +P +++RS N V +W+ S Sbjct: 2 SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42 >AK027681-1|BAB55292.1| 120|Homo sapiens protein ( Homo sapiens cDNA FLJ14775 fis, clone NT2RP4000185. ). Length = 120 Score = 31.5 bits (68), Expect = 2.4 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 167 SRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAWNQRS 289 S + PR +RR+ N E + +P +++RS N V +W+ S Sbjct: 2 SERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTES 42 >AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. Length = 4169 Score = 31.5 bits (68), Expect = 2.4 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +1 Query: 352 LSANSNCPRLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRSYRLTCDNVEQYA 531 L NS+ EK +F+G YP RKLK+ KN G S+ + +NVE + Sbjct: 3920 LEENSDVTSWSEEKREEKMLFTG------YPEDRKLKKNKKNSHEGVSWFVPVENVESRS 3973 Query: 532 RQ 537 ++ Sbjct: 3974 KK 3975 >AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein. Length = 2055 Score = 31.5 bits (68), Expect = 2.4 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +1 Query: 352 LSANSNCPRLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRSYRLTCDNVEQYA 531 L NS+ EK +F+G YP RKLK+ KN G S+ + +NVE + Sbjct: 1853 LEENSDVTSWSEEKREEKMLFTG------YPEDRKLKKNKKNSHEGVSWFVPVENVESRS 1906 Query: 532 RQ 537 ++ Sbjct: 1907 KK 1908 >D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription factor IIIA homologue protein. Length = 423 Score = 31.1 bits (67), Expect = 3.2 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = +1 Query: 376 RLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRS 495 +L+V+K+ + F G SS IYPPKRK + L Q G S Sbjct: 367 KLKVKKSREKREF-GLSSQWIYPPKRKQGQGLSLCQNGES 405 >X85786-1|CAA59771.1| 616|Homo sapiens binding regulatory factor protein. Length = 616 Score = 30.3 bits (65), Expect = 5.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331 RKR K+ + ER+ PLKS E +Q + + W W G GN G P Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520 >BC017471-1|AAH17471.1| 616|Homo sapiens regulatory factor X, 5 (influences HLA class II expression) protein. Length = 616 Score = 30.3 bits (65), Expect = 5.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331 RKR K+ + ER+ PLKS E +Q + + W W G GN G P Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520 >AL391069-15|CAM13081.1| 596|Homo sapiens regulatory factor X, 5 (influences HLA class II expression) protein. Length = 596 Score = 30.3 bits (65), Expect = 5.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331 RKR K+ + ER+ PLKS E +Q + + W W G GN G P Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520 >AL391069-14|CAH70327.1| 616|Homo sapiens regulatory factor X, 5 (influences HLA class II expression) protein. Length = 616 Score = 30.3 bits (65), Expect = 5.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331 RKR K+ + ER+ PLKS E +Q + + W W G GN G P Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520 >AK223526-1|BAD97246.1| 616|Homo sapiens regulatory factor X, 5 variant protein. Length = 616 Score = 30.3 bits (65), Expect = 5.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKRFPRNKRRSANSERSMVPLKS----ERSQLNDVRWHAWNQRSGLGNLCAGCR*RNP 331 RKR K+ + ER+ PLKS E +Q + + W W G GN G P Sbjct: 464 RKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGS-GGEGNSAGGAERPGP 520 >EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein. Length = 1998 Score = 29.9 bits (64), Expect = 7.3 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 360 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479 QQ+ GG E P+ W V+ +EA+A A +W Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115 >EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein. Length = 2016 Score = 29.9 bits (64), Expect = 7.3 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 360 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479 QQ+ GG E P+ W V+ +EA+A A +W Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115 >DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type V alpha subunit protein. Length = 2016 Score = 29.9 bits (64), Expect = 7.3 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 360 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 479 QQ+ GG E P+ W V+ +EA+A A +W Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115 >AF263523-1|AAG28029.1| 871|Homo sapiens vanilloid receptor-related osmotically activated channel protein. Length = 871 Score = 29.5 bits (63), Expect = 9.7 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 98 KHVRLRQFYFEV*ALNRRI*KVFSRKRFPRNKRRSANSERSMVPLKSERSQLNDVRWHAW 277 KH+ Q+ + + R VF RK F + + P + ++N+V W W Sbjct: 730 KHIWKLQWATTILDIERSF-PVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRVNEVNWSHW 788 Query: 278 NQRSGLGN 301 NQ G+ N Sbjct: 789 NQNLGIIN 796 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 84,320,504 Number of Sequences: 237096 Number of extensions: 1643883 Number of successful extensions: 4878 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4875 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6466646650 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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