Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0451
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    33   0.002
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.37 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 33.1 bits (72), Expect = 0.002
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = +3

Query: 264 QVGDYEFTKQDIIGHGAFAMV---YKGRKRKNPSQSVAVKVVTKKGIQKASEILVKEIKI 434
           ++G  + + Q +IG GAF +V   +   K  N +Q VAVK++ +    +      +EI I
Sbjct: 445 ELGPLKLSFQGVIGEGAFGIVRRAFLDLKEDNKTQ-VAVKMLKESPTSEEIRQFTQEINI 503

Query: 435 LRELTALQHKNLVAMHDCM 491
           ++ +   QH  +V++  C+
Sbjct: 504 MKSVR--QHPYIVSLIGCV 520



 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 512 VVMEYCNGGDLADYLQT 562
           +V+EYC+ GDL  YL+T
Sbjct: 530 LVVEYCSRGDLQTYLRT 546


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 454  CNTKTWSRCTTAWTAPPMLCCHGVLQ 531
            C T T      +W +PP+   +GV++
Sbjct: 1109 CTTLTAQTIRVSWVSPPLTAANGVIK 1134



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 240 KISENEVIQVGDYEFTKQDIIGH 308
           ++S +E  Q+G Y     D++ H
Sbjct: 453 RLSNSERNQIGQYVTVNGDVVSH 475



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 327 YKGRKRKNPSQSVAVKVVTKKGIQKASE 410
           YK  K  NP   V    +T   IQK +E
Sbjct: 743 YKDFKPNNPDIKVEDGTLTINNIQKTNE 770


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 433 ILISFTSISDAFWMPFFVTTFTATDWDGFFLFLPL 329
           I+ SF  ++DA W    +      D +GF  F  L
Sbjct: 54  IVYSFIGVNDADWSVLVIDPELDVDQNGFRNFTNL 88


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 344 KESVPVCCGEGGH 382
           + S P  CGE GH
Sbjct: 31  RNSAPSICGEHGH 43


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 53  SLVFLFCELNSLAPYRPG 106
           +L+F  CEL +  P  PG
Sbjct: 90  ALIFEKCELATCTPREPG 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,811
Number of Sequences: 336
Number of extensions: 2807
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)