Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0451
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    29   0.088
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          27   0.36 

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 29.5 bits (63), Expect = 0.088
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +3

Query: 267  VGDYEFTKQDIIGHGAFAMVYKG---RKRKNPSQSVAVKVVTKKGIQKASEILVKEIKIL 437
            + + E  +  ++G GAF  V+KG    + ++    VA+KV+ +    ++S+  ++E  I 
Sbjct: 829  IKEAEIRRGGVLGMGAFGRVFKGVWMPEGESVKIPVAIKVLMEMSGSESSKEFLEEAYI- 887

Query: 438  RELTALQHKNLV-AMHDCMDS 497
              + +++H NL+  +  CM S
Sbjct: 888  --MASVEHPNLLKLLAVCMTS 906


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 294 DIIGHGAFAMVYKGRKRKNPSQSVAVKVVTKK 389
           D+IG G F  V++GR R    ++VAVK+ + +
Sbjct: 63  DVIGKGRFGEVWRGRWR---GENVAVKIFSSR 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,723
Number of Sequences: 2352
Number of extensions: 10416
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)