Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0450
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 48 8e-06
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 40 0.002
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 38 0.005
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.005
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 34 0.083
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 33 0.19
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 32 0.33
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 32 0.44
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 32 0.44
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 30 1.8
SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06) 29 2.4
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17698| Best HMM Match : Neuromodulin (HMM E-Value=2.8) 29 2.4
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 29 3.1
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_8869| Best HMM Match : Keratin_B2 (HMM E-Value=0.35) 29 3.1
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 28 7.2
SB_1944| Best HMM Match : DUF1482 (HMM E-Value=7.3) 28 7.2
SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 28 7.2
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 27 9.5
SB_26414| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 27 9.5
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 244 AGISCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPN--ASPTNCGQYRTCVGGRAFD 417
+G++ G P + C G+G+I P + TP ++ K A P +C Y C GR+F
Sbjct: 196 SGLTVGDPNSIRCFGQGNIPPGKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFK 255
Query: 418 MVCPPGLAFNPDFSRCD 468
CP GL FN CD
Sbjct: 256 KFCPDGLKFNALIKSCD 272
Score = 34.7 bits (76), Expect = 0.063
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 131 NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVE 241
+G Y +C Y +C+ ++ CPDGL FN ++
Sbjct: 233 DGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIK 269
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 304 PAQTTPDCPHQYGIFKHPN-----ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 468
P + TP ++ G+F N A NC + C GG A CPPGL FN D CD
Sbjct: 443 PTEGTPKYSNKDGMFCERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCD 502
Query: 469 WA 474
W+
Sbjct: 503 WS 504
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 QSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
+ TP + + C+ +G Y NC ++ C A CP GL FN
Sbjct: 445 EGTPKYSNKDGMFCERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN 495
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +1
Query: 250 ISCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNAS-----PTNCGQYRTCVGGRAF 414
+ C +P +V C R + P T P P F N + P NC Y C GG +
Sbjct: 638 LECEWPNKVNCKSRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIY 697
Query: 415 DMVCPPGLAFNPDFSRCD 468
C GL FN RCD
Sbjct: 698 FRNCRRGLRFNGVTKRCD 715
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 ASPTNCGQYRTCVGGRAF-DMVCPPGLAFNPDFSRCDWADLVPSC 492
A +NC Y TC G + CP GLAFN CD+ VP C
Sbjct: 325 ADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGC 369
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 361 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 483
A NC + C G + M CP L ++P RC+WAD V
Sbjct: 527 ADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTV 567
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 295 SIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWA 474
++ P T P P A P+NC + TC G A+ CP L F+ C+W
Sbjct: 584 TMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWP 643
Query: 475 DLV 483
+ V
Sbjct: 644 NKV 646
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 110 NVICKARNGYYKTDANCDTYIECRD-YQATNMICPDGLHFNPSV 238
N + ++G Y +NC+ YI C + + N CP GL FN ++
Sbjct: 314 NFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 QSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAY 253
++ A C+ R +G Y NC+ +I+C + CP L FN +W Y
Sbjct: 718 RNVKCAGAGGGTFCEGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKKDWAEY 776
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 119 CKARN-GYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVE 241
C R+ G Y+ C+ +I C ++ +M CP+ L FNP+ +
Sbjct: 443 CAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTK 484
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 131 NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS 235
+G YK NC +I C + +M CP +F+P+
Sbjct: 383 DGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPA 417
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 89 PAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNP---SVEWP 247
P ++ C+ + NG Y +NC+ +I C + A CP L F+ EWP
Sbjct: 587 PQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWP 643
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 VQSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS 235
V T A ++ C + NG Y NC+ ++ C + M CP L ++P+
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPA 557
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 89 PAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
P + + CK NG Y+ NC YI CR C GL FN
Sbjct: 661 PTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFN 708
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 367 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 468
P C + +C + M CP L FNP CD
Sbjct: 454 PDACEGFISCSNHITYHMPCPENLRFNPTTKHCD 487
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 373 NCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 468
NC + C G + M CP F+P RC+
Sbjct: 391 NCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE 422
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 367 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 471
P C Y C G A++M CP GL +N + CDW
Sbjct: 97 PDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDW 131
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 110 NVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS---VEWP 247
+ ICK R +G Y C YI C + A M CP GL++N +WP
Sbjct: 83 STICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWP 132
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 361 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 468
A P+ C Y TC G A +M CP GL +N CD
Sbjct: 345 AHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 71 SHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
+H + + + N +G Y + CD YI C + A M CP GL++N
Sbjct: 321 NHPRQFTVSTSVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWN 373
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 244
N CK R NG Y NC YI C + CP GL++N + +W
Sbjct: 59 NSFCKKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKW 104
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 361 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVP 486
A P NC Y TC ++ CP GL +N CDW P
Sbjct: 71 AHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAP 112
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 34.3 bits (75), Expect = 0.083
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 370 TNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 471
T+C Y C G+A C PG ++P + C+W
Sbjct: 35 TSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 325 CPHQYGIFKHPN---ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
C Y + PN A P +C ++ C RAF CP GL ++ + CDW V C
Sbjct: 1232 CVDTYFCKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DC 1290
Query: 493 D 495
D
Sbjct: 1291 D 1291
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
A P +C ++ C RAF CP GL ++ + CDW V CD
Sbjct: 897 ADPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 941
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
A P +C ++ C RAF CP GL ++ + CDW V CD
Sbjct: 1002 ADPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYV-DCD 1046
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 367 PTNCGQYRTC-VGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFWVSLAPLLLW 537
P NC + C + RAF CP GL +N + + CD V +C+ E++ V L +LW
Sbjct: 1465 PRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNV-NCNREEYDV-LTLGILW 1520
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 352 HPNASPTNCGQYRTCVGGRAFDMV----CPPGLAFNPDFSRCDWADLVPSCDAE 501
H A P +C +Y C G +D V CP G +N +CD ADLV CD +
Sbjct: 73 HDFADPRDCFKYYHCDG---YDDVRWRSCPTGQLWNHVNKKCDRADLV-ICDRD 122
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
A P +C ++ C RAF C PGL ++ + CDW V CD
Sbjct: 792 ADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV-DCD 836
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
A P +C ++ C + F CP GL ++ + CDW V CD
Sbjct: 1147 ADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYV-DCD 1191
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 50 LALLVAASHVQSTPAAATAQNVICKAR-NGYYKTDAN-CDTYIECRDYQATNMICPDGLH 223
L +L+ + + A + CK + +G Y+ + C +I C +Y A+ CP GL
Sbjct: 53 LLVLLVTGAICTVTVTADIHDDFCKYKPDGEYRDPYDACRGFIHCHNYNASYKPCPGGLL 112
Query: 224 FNPSV---EWP 247
+N +WP
Sbjct: 113 YNEKTKQCDWP 123
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 286 GRGSIQPAQTTPDCPHQYGIFKHPNASPTN---CGQYRTCVGGRAFDMVCPPGLAFNPDF 456
G+ P Q PD P G + P +S + C C+GG + +CP G + P+
Sbjct: 1179 GQHCSTPGQNKPDGPCDPGYYCPPRSSSSKEIECPSGTYCIGGNSEPELCPIG-TYQPNT 1237
Query: 457 SRCDWADLVPSC 492
R AD SC
Sbjct: 1238 GRTALADCT-SC 1248
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 352 HPNASPTNCGQYRTCVG---GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
H A P +C +Y C G GR CP G +N +CD ADLV CD
Sbjct: 1497 HDFADPKDCSKYYHCDGYDDGRLRS--CPTGQLWNHVNKKCDRADLV-ICD 1544
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 367 PTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
P NC ++ C +AF CP GL ++ + CDW V CD
Sbjct: 126 PRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 168
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 131 NGYYKTDANCDTYIECRDY-QATNMICPDGLHFN---PSVEWPAYL 256
NG+Y NC + +C + +A CP GL ++ + +WP Y+
Sbjct: 120 NGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV 165
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 92 AAATAQNVICKARNGYYKTDANCDTYIECRDY-QATNMICPDGLHFN---PSVEWPAYL 256
A AT NG+Y NC + +C + +A CP GL ++ + +WP Y+
Sbjct: 14 ALATDATYCLSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV 72
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 367 PTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
P NC ++ C +AF CP GL ++ + CDW V CD
Sbjct: 33 PRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 75
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 119 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
C ++G+Y A+CD ECRD A++ P + +N
Sbjct: 164 CTCKSGFYGNGASCDDIDECRD--ASHKCSPHAICYN 198
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 370 TNCGQYRTCVGGRAFDMVCPPG 435
T C R CV G AF + CPPG
Sbjct: 2876 TPCPAGRYCVNGTAFGVPCPPG 2897
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 361 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPD 453
A+P +C C G ++ CP G F+PD
Sbjct: 1733 ANPVDCAAGHYCPSGTPIEVPCPTG-TFSPD 1762
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -2
Query: 545 DSIQRSRGASETQNFSASQEGTRSAQSQRL----KSGLNASP 432
DS ++ R S + SAS+EGTR A+ RL KS +ASP
Sbjct: 1923 DSSKKKRKRSPSPPTSASREGTRKAKRPRLTDSAKSSRSASP 1964
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 545 DSIQRSRGASETQNFSASQEGTRSAQSQRLKSGLNAS 435
DS ++ R S + SAS+EGTR A+ RL +S
Sbjct: 1814 DSSKKKRKRSPSPATSASREGTRKAKRPRLTDSAKSS 1850
>SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06)
Length = 757
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 43 HLPRLASGCKPCPINSRCCYCPERNLQSPQWLLQ 144
H+P++ GC C +S C C +R +S Q+ L+
Sbjct: 421 HVPQVTKGCVYCLRDSMCRECVQRKCRSIQFRLR 454
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +2
Query: 95 AATAQNVI--CKARNGYYKTDANCDTYIECRDYQATNMICPD-GLHFNPSVE 241
+A A+ VI C+ +G + +N + YIEC++ + CPD H+N +++
Sbjct: 410 SANAKLVIEECRKPSGKFPDPSNINGYIECKNNIPKRVDCPDVHQHWNDTLK 461
>SB_17698| Best HMM Match : Neuromodulin (HMM E-Value=2.8)
Length = 436
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 68 ASHVQSTPAAATAQNVICKARNGYYKTDAN 157
AS VQS PA A + +NGY+ T AN
Sbjct: 146 ASSVQSKPAQANTVPLCSLQKNGYWSTQAN 175
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +3
Query: 6 VNTLFKEKGCSPTSTSPC*WLQAMSNQLPLLLLPRT*SAKPAMVITKQTRIVIHTLNAGT 185
V F C+ T S Q + Q LL PRT +KP VI KQ +V L + T
Sbjct: 1458 VKKSFLAGACTITGNSVSISFQTIRTQFALL--PRTNCSKPKQVI-KQRFVVKSRLFSPT 1514
Query: 186 IKLLT*YARMVCTLILAWNGR 248
++ +A + T++ A + R
Sbjct: 1515 VRQYNMHASSILTVVHALDER 1535
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 322 DCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 465
DCP G F P ++ G+Y C G M CP + + D C
Sbjct: 2178 DCPTSDGFFPDPASN----GRYIHCSGNSPEIMSCPDKMTWQNDIKSC 2221
>SB_8869| Best HMM Match : Keratin_B2 (HMM E-Value=0.35)
Length = 674
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 262 YPVEVTCVGRGSIQPAQTTPDCPHQ-YGIFK----HPNASPTNCGQYRTCVGGRAFD 417
Y V +C GR + + T C + Y K +PN P G Y +C G + +D
Sbjct: 35 YGVYTSCCGRQTYDNRRNTSCCRYTPYNRLKQICCYPNILPRRYGVYTSCCGRQTYD 91
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +1
Query: 253 SCGYPVEVTCVG-----RGSIQPAQTTPDCPHQYGIFKHPNASPTNC 378
SCG+PVE C R I+ + PDC H H N S C
Sbjct: 1213 SCGHPVERQCCELLNNLRCDIRVSYVFPDCNHVSSKKCHVNPSQLKC 1259
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 542 SIQRSRGASETQNFSASQEGTRSAQSQRLKSGLNASPGGHTMSKAR 405
S RSR +S +++ S S+ +RS +S N+SP G S R
Sbjct: 70 SRSRSRSSSRSRSRSRSRSRSRSLSGGSSQSTRNSSPAGSKKSTPR 115
>SB_1944| Best HMM Match : DUF1482 (HMM E-Value=7.3)
Length = 491
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 158 NSRLFCNNHCGLCRLRSGQ*QQRELIGHGLQPL 60
N R + HCGLC R G + R+ G L L
Sbjct: 28 NIRTLTHPHCGLCSQRRGSSKSRKTFGTCLSTL 60
>SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 828
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 530 SRGASETQNFSASQEGTRSAQSQRLKSGLNASPGGHTMSKARPPTHVRYWPQ 375
SR AS +S S+ GT+S S L T K+ PP H RY P+
Sbjct: 92 SRPASSRSGYS-SKSGTKSIHSSPTAMYLGFQ---RTRCKSAPPRHFRYVPK 139
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 443 NASPGGHTMSKARPPTHVRYWPQLVG 366
N S GG T S ARP + W Q G
Sbjct: 1803 NKSEGGKTFSSARPSLWYQTWRQFAG 1828
>SB_26414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 265 DNRKICRPFHARIKVQTIRAYHVSSLIVPA 176
+N K P + ++TIR YHV+ + PA
Sbjct: 49 ENAKFFHPLRIEVVLRTIRDYHVTFQMFPA 78
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 8/37 (21%)
Frame = +1
Query: 55 LASGC-KPCPINSRCCY---C----PERNLQSPQWLL 141
L GC KPCP RC Y C PERN +S L+
Sbjct: 424 LCKGCGKPCPYGPRCTYGNRCKFLHPERNSKSEAELM 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,255,229
Number of Sequences: 59808
Number of extensions: 541482
Number of successful extensions: 1504
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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