Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0450
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 40 0.001
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 40 0.001
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 39 0.003
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.003
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.003
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 32 0.29
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 32 0.29
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 32 0.39
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 32 0.39
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 26 3.4
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical ... 27 8.4
AF078780-1|AAC26911.1| 354|Caenorhabditis elegans Serpentine re... 27 8.4
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/82 (39%), Positives = 39/82 (47%)
Frame = +1
Query: 256 CGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPG 435
C YP +V+ G QT +C ++G F A NC + CV GR M CP G
Sbjct: 1226 CDYPQKVS----GCENHGQTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSG 1277
Query: 436 LAFNPDFSRCDWADLVPSCDAE 501
FNP S CDW VPSC +
Sbjct: 1278 TVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 373 NCGQYRTCVGGRAFDMV-CPPGLAFNPDFSRCDWADLVPSCD 495
+C C GG F+ C LAFN +CD+ V C+
Sbjct: 1195 DCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 125 ARNGYYKTDAN-CDTYIECRDYQATNMICPDGLHFNPSV---EWPA 250
+ +G + DAN C+ + C + M CP G FNP + +WP+
Sbjct: 1246 SEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPS 1291
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 471
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFWVSLAP 525
Q+ +CV G A+ CP L FN C SCD K + AP
Sbjct: 114 QFISCVAGGAYMAKCPDSLVFNERTQDCR-----ESCDEVKQDTTTAP 156
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 352 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
HPN + + TC GG A M CP L FNP CDW V C
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 CGYPVEVT-CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPP 432
C +P +V C G + QP C G F S + + C GRA M CP
Sbjct: 290 CDWPRDVAECAGLPTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPA 339
Query: 433 GLAFNPDFSRCDWADLVPSC 492
GL F+ RCD+ V C
Sbjct: 340 GLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 352 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
HPN + + TC GG A M CP L FNP CDW V C
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 CGYPVEVT-CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPP 432
C +P +V C G + QP C G F S + + C GRA M CP
Sbjct: 290 CDWPRDVAECAGLPTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPA 339
Query: 433 GLAFNPDFSRCDWADLVPSC 492
GL F+ RCD+ V C
Sbjct: 340 GLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 495
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 83 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 244
+T A+ NV +G+Y NC ++ C ++ +M CP GL ++ S+++
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY 523
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 367 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 477
P++C ++ CV G +++ CP GL+F+ D CD D
Sbjct: 575 PSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 34.3 bits (75), Expect = 0.073
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 352 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 465
+PN++ NCG + C+ +++ M CP GL ++ C
Sbjct: 489 YPNSN--NCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 AASHVQSTPAAATAQNVICKA-RNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
+A V +T A T K ++G++ ++C +I C + + N CP+GL F+
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH 601
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 304 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 483
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 484 PSC 492
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 304 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 483
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 484 PSC 492
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 358 NASPTNCGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
N S + C + +C G A CP L FNP S CDW V C
Sbjct: 184 NISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Score = 34.3 bits (75), Expect = 0.073
Identities = 24/83 (28%), Positives = 31/83 (37%)
Frame = +1
Query: 253 SCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPP 432
SC +P V S +P +C G F S + + C G M CP
Sbjct: 219 SCDWPKNVMDCSEKSEKPQ----NCGEVDGYFSFGRCSSS----FSACTNGIPIVMFCPD 270
Query: 433 GLAFNPDFSRCDWADLVPSCDAE 501
GL F+ CD+ V CD E
Sbjct: 271 GLMFSEKNQMCDYEWNVDECDLE 293
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 501
++ CV G A M CP L ++ + CDW V C E
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 391 TCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 501
+C GR CPP L FN + CD+ + C E
Sbjct: 328 SCQNGRENIFECPPSLVFNENSLICDYPETSLKCCME 364
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 382 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 421 VCPPGLAFNPDFSRCDWADLVPSC 492
+C GL F+P+ +RC AD + C
Sbjct: 129 ICENGLFFSPEQARCAPADQIAEC 152
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 247 GISCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 414
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 1104 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 1161
Query: 415 DMVCPPG 435
D +CPPG
Sbjct: 1162 DGLCPPG 1168
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 247 GISCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 414
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 446 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 503
Query: 415 DMVCPPG 435
D +CPPG
Sbjct: 504 DGLCPPG 510
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +1
Query: 247 GISCGYPVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAF 414
G+ C P VTC SI P T CP Y + N P +C G A
Sbjct: 446 GVCC--PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAI 503
Query: 415 DMVCPPG 435
D +CPPG
Sbjct: 504 DGLCPPG 510
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 394 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 391 TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 477
TC GRAF CP L FN CD+A+
Sbjct: 452 TCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 376 CGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEK 504
C Q Y C+ GR+ C PGL +N C + V +C K
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKIGK 945
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 122 KARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 229
+ NG Y D D YI C +++ T CP GL ++
Sbjct: 790 RLENGNYGLDCE-DYYISCNNFETTINRCPAGLFYS 824
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 NGYYKTDANCDTY-IECRDYQATNMICPDGLHFNPSVE 241
+GYY A C +Y C D Q M CP+ L F+ E
Sbjct: 960 DGYYS--AGCSSYYFSCIDEQIRKMSCPNSLKFSKESE 995
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 319 PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 468
P CP G++ +S +Y CV ++ CP GL F+ +RC+
Sbjct: 41 PPCPDGDGLYAVGCSS-----KYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 385 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
Y C GRAF C L +N D C++ C
Sbjct: 1041 YIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 394 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 492
C G+ F CP L + D + CD+ + V C
Sbjct: 224 CSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 304 PAQTTPDCPHQYGIFKHPNAS-PTNCGQYR-TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 477
P+ TTP H + N + +C Y +C CP GL ++ +RCD+ +
Sbjct: 775 PSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKE 834
Query: 478 LVPSCDAEKFWVSLAP 525
V C K S P
Sbjct: 835 HVEDCPEYKPTPSTTP 850
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.39
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Frame = +1
Query: 238 GMAGISCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVG 402
G G++C E C G+ P Q DC P +YG F PN C Q +C
Sbjct: 1461 GKYGLNCTLDCE--CYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQN 1518
Query: 403 GRAFD-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 501
G D +CP G + +C P+C +
Sbjct: 1519 GAHCDGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.39
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Frame = +1
Query: 238 GMAGISCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVG 402
G G++C E C G+ P Q DC P +YG F PN C Q +C
Sbjct: 1461 GKYGLNCTLDCE--CYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQN 1518
Query: 403 GRAFD-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 501
G D +CP G + +C P+C +
Sbjct: 1519 GAHCDGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 141 TKQTRIVIHTLNAGTIKLLT*YARMVCTLILAW 239
TK+T V+ TL TI L++ + CTLIL W
Sbjct: 70 TKETPFVLVTLAINTIVLISAITQDFCTLILTW 102
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 0.90
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 507 LGFTCPPAPLDAIGNPLNNVINYKYEGNCYY 599
L F C AP +P+ + +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 25.8 bits (54), Expect(2) = 3.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 73 PCPINSRCCYCPERNLQSPQWLL 141
PCP N C C N Q+ Q L+
Sbjct: 179 PCPQNQPACTCSTNNQQNEQILV 201
Score = 21.4 bits (43), Expect(2) = 3.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 241 MAGISCGYPVEVTCVGRGSIQPAQTTP 321
+ ISC E T +QP Q TP
Sbjct: 200 LVSISCCQQQETTTQAPVQMQPCQCTP 226
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 552 PLNNVINYKYEGNCYY 599
P+ N ++Y GNCYY
Sbjct: 163 PITNTCTFQYNGNCYY 178
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 119 CKARNGYYKTDANCDTYIECRDYQATNMIC 208
C G+ K + C T C D+ TN+ C
Sbjct: 586 CICAPGFVKKNGKCVTLASCPDHDHTNITC 615
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 119 CKARNGYYKTDANCDTYIECRDYQATNMIC 208
C G+ K + C T C D+ TN+ C
Sbjct: 651 CICAPGFVKKNGKCVTLASCPDHDHTNITC 680
>AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical
protein Y116F11B.13 protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 331 HQYGIFKHPNASPTNCGQYRT---CVGGRAFDMVCPPGL 438
++Y N + NC +Y C GGR D +C PGL
Sbjct: 131 NEYWAVGRKNEATRNCQRYERRSRCDGGRNEDGLCVPGL 169
>AF078780-1|AAC26911.1| 354|Caenorhabditis elegans Serpentine
receptor, class h protein79 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 369 HQLWPVPNMRRWSCF 413
H WP+ NM WSCF
Sbjct: 60 HYRWPLFNMHFWSCF 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,123,153
Number of Sequences: 27780
Number of extensions: 388564
Number of successful extensions: 1171
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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