BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0450 (630 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.4 Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 2.4 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.2 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.3 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7 AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.9 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 23.8 bits (49), Expect = 1.4 Identities = 7/24 (29%), Positives = 12/24 (50%) Frame = +1 Query: 49 PRLASGCKPCPINSRCCYCPERNL 120 P + CK C ++CC+ + L Sbjct: 431 PPIGCECKTCNSKTKCCFAQDDGL 454 >Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 protein. Length = 402 Score = 23.0 bits (47), Expect = 2.4 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +1 Query: 388 RTCVGGRAFDMVCPPGL---AFNP 450 +TC+ GRAF ++ G AFNP Sbjct: 299 KTCISGRAFQVLTWLGYSNSAFNP 322 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 22.6 bits (46), Expect = 3.2 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = -1 Query: 429 RAYHVESTTTYACSVLATIGGRSVR--MFEDAILVRAIRCCLGRLD--APSSYTCH 274 R VE + Y C V ++GG SV + A L I +D P+++TC+ Sbjct: 275 REARVEDSGKYLCIVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCN 330 Score = 22.6 bits (46), Expect = 3.2 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +3 Query: 426 PAGTSIQSRLQPL*LGRPCTF 488 P G I+ Q + GRP TF Sbjct: 307 PLGAEIEPSTQTIDFGRPATF 327 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 22.2 bits (45), Expect = 4.3 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 241 PCVLIASMAVLGFTLPP 257 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 204 PCVLISSMALLGFTLPP 220 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 272 PCVLISSMALLGFTLPP 288 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 Query: 477 PCTFL*C*KILGFTCPP 527 PC + +LGFT PP Sbjct: 272 PCVLISSMALLGFTLPP 288 >AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 protein. Length = 232 Score = 21.0 bits (42), Expect = 9.9 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +1 Query: 79 PINSRCCYCPERN 117 PI + CC PE N Sbjct: 158 PIPASCCNSPENN 170 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 193,571 Number of Sequences: 438 Number of extensions: 4724 Number of successful extensions: 15 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18826962 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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