Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0449
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    27   0.11 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    27   0.11 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.24 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.7  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.1  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 159 TEQPPPYSAAVPPGLQP-HTYPQASNPPGAPFPHHLRAIVH 278
           TE P  YS++ P G  P H+   AS  P A    ++ A  H
Sbjct: 29  TEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHH 69



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +1

Query: 202 FNRIHTHRHLIRQVHLFPTTSGL*SIWCSSSTNRLCTKLRSHKHYN 339
           FN   T R  I   H    T     IW  +   +L  +LR+ K  N
Sbjct: 237 FNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEIN 282


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 159 TEQPPPYSAAVPPGLQP-HTYPQASNPPGAPFPHHLRAIVH 278
           TE P  YS++ P G  P H+   AS  P A    ++ A  H
Sbjct: 29  TEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHH 69


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 171 PPYSAAVPPGLQPHTYPQASNPPGAPFPHHLRAI 272
           P   A   PGL P  + QA++PP  P P  L A+
Sbjct: 51  PTNPAFFHPGLLPLAW-QANSPPSPPAPSELPAL 83


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 129 LFSIMEKPTVTEQPPPYSAAVPPGLQPH 212
           L  I  K T  + PPP ++    GL+PH
Sbjct: 141 LDEIEVKVTGNDAPPPITSFETSGLRPH 168


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 168 PPPYSAAVPPGLQPHTYPQASNPP 239
           P P SAA P      T P A+ PP
Sbjct: 13  PAPQSAATPISSSGMTSPAAAPPP 36


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +1

Query: 202 FNRIHTHRHLIRQVHLFPTTSGL*SIWCSSSTNRLCTKLRSHKHYN 339
           FN   T R  I   H    T     IW  +   +L  +LR+ K  N
Sbjct: 27  FNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEIN 72


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 138 IMEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPGAPFPH 257
           +M  PTV+        A    L P    Q + PP A  P+
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPY 124


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 138 IMEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPGAPFPH 257
           +M  PTV+        A    L P    Q + PP A  P+
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPY 124


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +1

Query: 202 FNRIHTHRHLIRQVHLFPTTSGL*SIWCSSSTNRLCTKLRSHKHYN 339
           FN   T R  I   H    T     IW  +   +L  +LR+ K  N
Sbjct: 178 FNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEIN 223


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = -3

Query: 391 NANSTCGASSDCDYSW-WYYNVCGSVAWYKACLWRRSTIWTIARRWWGKG 245
           N + TCG    C++ W   +N+ G         +R +   T    WW  G
Sbjct: 368 NDDGTCGNGYGCEHRWRQIFNMVG---------FRNAVQGTGIENWWSDG 408


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 343 WYYNVCGSVAWY 308
           WY+ +CGS   Y
Sbjct: 338 WYFQICGSAFSY 349


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = -3

Query: 391 NANSTCGASSDCDYSW-WYYNVCGSVAWYKACLWRRSTIWTIARRWWGKG 245
           N + TCG    C++ W   +N+ G         +R +   T    WW  G
Sbjct: 367 NDDGTCGNGYVCEHRWRQIFNMVG---------FRNAVQGTGIENWWSDG 407


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 468 ARQHSIPNGKKRMAHKIPRHVKSSSK 391
           AR   +P+ KK+  H +PR V  +S+
Sbjct: 210 ARYRFMPDIKKKGLHSLPRLVLFTSE 235


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 474 KTEDVQTVERCLLSCHYKSLFKLFNTMY 557
           K + V   + C L  H   L +LFN ++
Sbjct: 845 KAQSVALGKICTLHHHLSKLIRLFNEIF 872


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = -3

Query: 391 NANSTCGASSDCDYSW-WYYNVCGSVAWYKACLWRRSTIWTIARRWWGKG 245
           N + TCG    C++ W   +N+ G         +R +   T    WW  G
Sbjct: 368 NDDGTCGNGYVCEHRWRQIFNMVG---------FRNAVQETGIENWWSDG 408


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 325  GSVAWYKACLWRRSTIWTIARRWWGKGAP 239
            G +A+Y+ C   +   WT+ R   G+  P
Sbjct: 2598 GFLAYYEICERVKKRGWTVTRDPQGRIGP 2626


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 280 WCSSSTNRLCTKLRSHKHYNTTSY 351
           WCSSS   L T   +   YN   Y
Sbjct: 235 WCSSSQPVLSTTNSTTNCYNNYPY 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,222
Number of Sequences: 336
Number of extensions: 3835
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)