Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0449
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-6|CAA90999.2| 119|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 33 0.24
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 0.56
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 0.56
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 31 0.74
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 30 1.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 1.7
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 30 1.7
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 30 1.7
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 29 2.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.2
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 28 5.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 27 9.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 27 9.1
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z54238-6|CAA90999.2| 119|Caenorhabditis elegans Hypothetical
protein T28C6.8 protein.
Length = 119
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 365 ACPACRVGILEDDFTCLGILCAILFFPLGILCCLALKNRRCSNC 496
+CPAC ++ F+ IL AI FP GI CC+ K C+ C
Sbjct: 10 SCPACTQKKVKSRFSWRAILYAIFCFPCGIYCCMKRKTYYCTQC 53
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 165 QPPPYSA-AVPPGLQPHTYPQASNPPGAPFPHHLRAIVHMVLLLHKQ 302
QPPPYS V P P Y A PP P PH + + ++ +K+
Sbjct: 324 QPPPYSYYPVAPAAAPQVYHYAPPPPPPP-PHPQQGLYQQNMMAYKK 369
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 171 PPYSAAVPPGLQPHTYPQASNPPGAPFPHHLRAIVHMVLLLHKQALY 311
PP A PPG P+ YP + PP P H + H L +Q Y
Sbjct: 744 PPAGFAPPPGA-PYGYPPGAPPPAGFHPSHPQHPQHAQYLAWQQQRY 789
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 162 EQPPPYSAAVPPGLQPHTYPQASNPPGAPFPHH 260
+ PPP+ PP PH Y Q PP + + HH
Sbjct: 86 QYPPPHGLGPPPP-PPHYYTQPPPPPQSGYYHH 117
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3
Query: 238 GGLDACGYVCG*SPGGTAAEYGGGCSVTVGFSIILNN 128
GG CG CG GG GGGC T+G S+I N
Sbjct: 23 GGGGGCGGGCG---GGCGGGGGGGCLPTLGCSVISFN 56
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 108 IIYFDY*LFSIMEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPGAPFPHHLRAIV 275
+++ DY ++ + PTV EQ P + A+V P PH Y + + PH L A V
Sbjct: 13 MMHSDY--YTQSQGPTV-EQQPEWQASVQPYSDPHAYSPSFYMNMSQVPHFLPAQV 65
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 150 PTVTEQPPPYSAAVPPGLQPHTYPQ----ASNPPGAPFPHH 260
P V + P A PP P YPQ A PP AP+P H
Sbjct: 37 PYVEQSAQPQQTAPPP--PPAPYPQQAVPAPAPPPAPYPQH 75
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +3
Query: 174 PYSAAVPPGLQPHTYPQ----ASNPPGAPFPHH 260
P +A P P YPQ A PP AP+P H
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQH 120
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 108 IIYFDY*LFSIMEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPGAPFPHHLRAIV 275
+++ DY ++ + PTV EQ P + A+V P PH Y + + PH L A V
Sbjct: 1 MMHSDY--YTQSQGPTV-EQQPEWQASVQPYSDPHAYSPSFYMNMSQVPHFLPAQV 53
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 256 TTSGL*SIWCSSSTNRLCTKLRSHKHYNTTSYNHSRS 366
T SGL C+SS + C +R H +YN Y S+S
Sbjct: 255 TWSGLGDCQCASSNSSDCHWIRLHTNYNKCIYEISKS 291
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 111 IYFDY*LFSIMEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPGAPFPHHLRAIV 275
++ DY ++ + PTV EQ P + A+V P PH Y + + PH L A V
Sbjct: 1 MHSDY--YTQSQGPTV-EQQPEWQASVQPYSDPHAYSPSFYMNMSQVPHFLPAQV 52
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 253 GKGAPGGLDACGYVCG*SPGGTAAEYGGGCS 161
G G GG ++CG C + GG+ GGGCS
Sbjct: 2135 GGGCSGGGNSCGGGC--NSGGSCGGGGGGCS 2163
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 144 EKPTVTEQPP-PYSAAVPPG--LQPHTYPQASNPPGAP 248
+ P V + PP P + PP QP T QAS PP +P
Sbjct: 406 QAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSP 443
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 159 TEQPPPYSAAVPPGLQPHTYPQASNPPGAPFP 254
+E P P P + P P S+PPG P P
Sbjct: 218 SEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGP 249
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 150 PTVTEQPPPYSAAVPPGLQPHTYPQASNPPGA 245
P++ PP S +V PG +P + P A+ PPG+
Sbjct: 207 PSIVTVTPP-SPSVTPGGRPGSTPPATFPPGS 237
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 150 PTVTEQPPPYSAAVPPGLQPHTYPQASNPPGA 245
P++ PP S +V PG +P + P A+ PPG+
Sbjct: 130 PSIVTVTPP-SPSVTPGGRPGSTPPATFPPGS 160
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 168 PPPYSAAVPPGLQPHTYPQASNPPGAPFP 254
P P P G P P A+ PPG P P
Sbjct: 231 PGPAGPPGPDGASPTAAPGAAGPPGPPGP 259
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 168 PPPYSAAVPPGLQPHTYPQASNPPGAPFP 254
P P P G P P A+ PPG P P
Sbjct: 230 PGPAGPPGPDGASPTAAPGAAGPPGPPGP 258
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 165 QPPPYSAAVPPGLQPHTYPQ 224
QPPP PP QP YPQ
Sbjct: 118 QPPPCQRPQPPQPQPQPYPQ 137
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 165 QPPPYSAAVPPGLQPHTYPQ 224
QPPP PP QP YPQ
Sbjct: 118 QPPPCQRPQPPQPQPQPYPQ 137
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 165 QPPPYSAAVPPGLQPHTYPQ 224
QPPP PP QP YPQ
Sbjct: 118 QPPPCQRPQPPQPQPQPYPQ 137
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 141 MEKPTVTEQPPPYSAAVPPGLQPHTYPQASNPPG 242
M+ V PPPY PP QP P ++ P G
Sbjct: 318 MDMNDVPPSPPPYRKPAPP--QPQAPPTSAGPLG 349
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 247 GAPGGLDACGYVCG*SPGGTAAEYGGG 167
G PGG GY G GG YGGG
Sbjct: 142 GGPGGYGMGGYGGGGGGGGDFGGYGGG 168
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 TEQPPPYSAAV-PPGLQPHTYPQASNPPGAPFP 254
T PP + + PPG+QPH P PP P P
Sbjct: 9 TSAPPQANGHLRPPGIQPHRNP--FTPPPLPSP 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,914
Number of Sequences: 27780
Number of extensions: 333942
Number of successful extensions: 1329
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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