Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0448
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0539 - 18416184-18416830,18417983-18419057                       32   0.38 
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729...    31   1.2  
11_06_0616 + 25546175-25546359,25546778-25546837,25546939-255469...    29   4.7  
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442...    29   4.7  
06_03_0675 - 23428948-23431389                                         28   8.3  
05_06_0106 - 25611239-25611295,25611388-25611477,25611582-256116...    28   8.3  

>09_04_0539 - 18416184-18416830,18417983-18419057
          Length = 573

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 416 EPQNDYCENNANNDRPTQWSS 478
           E +N+ CEN+ANN   T+WSS
Sbjct: 365 EMRNETCENSANNHSETEWSS 385


>06_03_1229 +
           28571131-28571235,28572108-28572656,28572749-28572918,
           28573454-28573669,28573787-28573946
          Length = 399

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 632 DSTLPKYICHICGKSFRQQSAHA 700
           DST   Y C +CGK +R   AHA
Sbjct: 61  DSTPMLYSCALCGKEYRSSKAHA 83


>11_06_0616 +
           25546175-25546359,25546778-25546837,25546939-25546957,
           25547948-25547998,25548097-25548230,25548558-25548948,
           25549840-25549890
          Length = 296

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 598 ANQLSCICDIGLFYLWLN*DKQVTLCYRDH 509
           A +LS +CDI L  L  + + + T+C  DH
Sbjct: 32  AKELSILCDIPLILLMFSPNDKPTICVGDH 61


>02_02_0421 -
           10042184-10042197,10042442-10042822,10044158-10044261,
           10044634-10044734,10044806-10045147,10045981-10046158,
           10047696-10047776,10049190-10049449
          Length = 486

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/79 (21%), Positives = 34/79 (43%)
 Frame = -2

Query: 323 PFEIVSHIVKVCNKHCTNT*ETHIFADVDVSKCSHIVR*ISRTVRSINGYSAFF*TYSAF 144
           P  ++SH V   NK+  +  +T     +D     +++  ++R  R +  ++     Y  F
Sbjct: 38  PSNLLSHEVITWNKNLLHIEKTSHNGTLDPKVTGNLIVCVNRATRLVKSWNGVMLKYVLF 97

Query: 143 SKICNGFSFSHFTMMIYYC 87
            ++    S S    M+ YC
Sbjct: 98  KRVGYIESLSLMIRMLLYC 116


>06_03_0675 - 23428948-23431389
          Length = 813

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 YGPDCSTDLSYDVRTFGDIDIS 248
           YGP+CS +  Y +  F DI  S
Sbjct: 427 YGPNCSAENQYSIANFSDISRS 448


>05_06_0106 -
          25611239-25611295,25611388-25611477,25611582-25611669,
          25611757-25611836,25611968-25612120,25612403-25612546,
          25612633-25612884,25612985-25613116,25613207-25613287,
          25613368-25613488,25613930-25614025,25614195-25614298,
          25614481-25614567,25614690-25614803,25614871-25614930,
          25615007-25615102,25615316-25615366,25615457-25615562,
          25615642-25615713,25616117-25616172,25616446-25616508,
          25616636-25616764
          Length = 743

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -1

Query: 75 LCSFVMVIVHITTFSLRLVHIIK 7
          LC+F ++++ +  FS+RL  +IK
Sbjct: 24 LCAFTLLLIGVLAFSIRLFSVIK 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,557,476
Number of Sequences: 37544
Number of extensions: 304093
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)