Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0448
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0) 34 0.13
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 34 0.13
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 33 0.22
SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.30
SB_6551| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.30
SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.39
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.39
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.6
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 2.1
SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.8
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.6
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.8
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.4
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_18719| Best HMM Match : UPF0023 (HMM E-Value=0) 28 6.4
SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.4
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.4
SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45) 28 8.4
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 605 HSRDHYAIHDSTLPKYICHICGKSFRQQS 691
H +DH +H P Y+C IC K F+Q S
Sbjct: 176 HLKDHIRVHTGERP-YVCDICQKGFKQSS 203
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 605 HSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
H + H+ +H P Y CH+CG++F QQ +
Sbjct: 333 HLQRHHLVHTGEKP-YKCHLCGRAFSQQGS 361
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFRQ 685
+GH H IH P Y C ICG+ FRQ
Sbjct: 161 RGHLSSHQRIHSGEKP-YECDICGRRFRQ 188
>SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 370
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 575 AYARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQ 688
A+ R K H R H ST+ +++CHIC K F Q+
Sbjct: 268 AFNRSSTLKTHQRTH-----STVKEFVCHICEKGFHQK 300
>SB_6551| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 330
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 569 NVAYARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQ 688
N A+ R K H R H S + +YIC +CGK F Q+
Sbjct: 225 NKAFNRSSTLKTHIRTH-----SEVKEYICEVCGKGFHQK 259
>SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 347
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFRQ 685
KG+ ++H H P + CHICGK+F Q
Sbjct: 268 KGNYKNHRLTHTGEKP-FKCHICGKAFHQ 295
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQS 691
H +H P + C ICGK FRQ S
Sbjct: 190 HMPVHTGARP-FKCKICGKGFRQAS 213
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 605 HSRDHYAIHDSTLPKYICHICGKSFRQQS 691
H + H H P YICH CGK+F Q S
Sbjct: 400 HLQAHERTHTGEKP-YICHYCGKAFAQTS 427
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQSAHA 700
H+ +H T P Y C+ C K++RQ S A
Sbjct: 944 HHVVHTHTKP-YTCNACNKTYRQTSTLA 970
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
KGH + H H P + C+ CGKSF+ S
Sbjct: 127 KGHLKAHLLAHSGLKP-HTCNECGKSFKSLS 156
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 590 LVSKGHSRDHYAIHDSTLPKYICHICGKSFR 682
L +K RDH H P ++C CGK+FR
Sbjct: 447 LRTKSSLRDHRKTHTDNKP-FVCEECGKTFR 476
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFR 682
++ S+G + H H + P Y C +CGK+FR
Sbjct: 329 KRFSSQGSFKIHLNSHGNEKP-YSCDVCGKAFR 360
>SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 479 VQQYFLDLSNVISIT*SYLFVSI*P-EVKKSNVAYARKLVSKGHSRDHYAIHDSTLPKYI 655
++Q DL N+ L +S P E + + R+ H R H +H P Y
Sbjct: 77 IEQKLFDLKNIAEEVSEALNLSEKPHECDECGKCFTRR----AHLRAHLIVHLELKP-YK 131
Query: 656 CHICGKSFRQQSA 694
C+ CGK + Q S+
Sbjct: 132 CNECGKCYNQTSS 144
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
++ +K R H H P Y+C CGKSF+++++
Sbjct: 1088 KRFKAKQSLRVHEKTHSDARP-YVCEKCGKSFKRRNS 1123
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 390 SDTDTELFFKIDSLKSI---SDCLAAFRNSIAHCKSL*QALHKYLGNS 256
SD E F+ D LKSI D ++ +++ A C S+ LHK+ NS
Sbjct: 758 SDFLREEFYVDDGLKSIYTVEDAISKIKSAQAMCASVNLRLHKFSSNS 805
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 596 SKGHSRDHYAIHDSTLPKYICHICGKSFR 682
SKG H IH P ++C CGKSF+
Sbjct: 365 SKGFLAKHEVIHSDQRP-HVCMECGKSFK 392
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 596 SKGHSRDHYAIHDSTLPKYICHICGKSFR 682
SKG H IH P ++C CGKSF+
Sbjct: 297 SKGFLAKHEVIHSDQRP-HVCMECGKSFK 324
>SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 927
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
K + + H IH P Y C CGK F QQ+
Sbjct: 199 KANLKTHLVIHSGQKP-YKCDECGKCFTQQT 228
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 557 VKKSNVAYARKLVSKGHSRD-HYAIHDSTLPKYICHICGKSFRQQS 691
+KK +L + H + H IH P Y+C+ CG SFR S
Sbjct: 801 IKKFKCEECGRLFRRLHQLNVHSRIHTGEKP-YVCNRCGVSFRHDS 845
>SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ G+ + H IH P Y C CGKSF + +
Sbjct: 337 KRFTLSGNMKKHVKIHSGKKP-YKCDECGKSFTEHA 371
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 602 GHSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
G+ + H IH P Y C +CGK F + A
Sbjct: 427 GNLKKHLMIHSGQKP-YKCDVCGKCFTRSGA 456
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQS 691
H IH P Y+C +CGK F +Q+
Sbjct: 460 HLMIHSGQKP-YVCVVCGKCFTRQT 483
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 120 TKSITNFTKC--RICLKEGGIPIYGPDCSTDLSYDVRTFG 233
+ S+T F KC + LKE YGPDC+T+ + +FG
Sbjct: 311 SSSVTGFYKCNNKTGLKECFNHWYGPDCTTNCTPRNDSFG 350
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFR 682
H AIH S P Y C CGK FR
Sbjct: 416 HMAIHVSGTP-YKCEYCGKEFR 436
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQ 688
H H P Y C ICGK FRQQ
Sbjct: 479 HNRSHTDERP-YKCDICGKKFRQQ 501
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
+ ++K H+ H P Y C IC KSFR + +
Sbjct: 524 KAFITKAKLDRHFRTHSGEKP-YRCEICEKSFRDKDS 559
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 578 YARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
+ARK + + HSR H S L Y C +C K F Q+S
Sbjct: 468 FARKDLFEYHSRTH-----SGLKPYRCRLCDKYFAQRS 500
>SB_18719| Best HMM Match : UPF0023 (HMM E-Value=0)
Length = 208
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 EMAETKSI-TNFTKCRICLKEGGIPIYGPDCSTDLSYDVRTFGDIDISE 251
E+ +T ++ TN +K ++ E + +G D TD+ + G++ +SE
Sbjct: 7 EVLQTHTVFTNVSKGQVAKNEDLVRAFGTDNQTDICLKILAKGELQVSE 55
>SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 917
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFRQQSAH 697
K + + H IH P Y C+ CGK F + H
Sbjct: 546 KSNLKTHLMIHSGKKP-YKCYECGKCFSRHRLH 577
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 602 GHSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
G + H IH P Y CH CGK F A
Sbjct: 132 GALKTHLRIHTGQKP-YECHECGKCFTHSGA 161
>SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45)
Length = 243
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQSA 694
H+ IH P + C +CG+ F Q S+
Sbjct: 152 HFRIHSGEKP-FRCRVCGRQFSQSSS 176
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 602 GHSRDHYAIHDSTLPKYICHICGKSFRQQSA 694
G + H IH P Y CH CGK F A
Sbjct: 97 GALKTHLRIHTGQKP-YECHECGKCFTHSGA 126
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,503,440
Number of Sequences: 59808
Number of extensions: 413659
Number of successful extensions: 1115
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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