Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0448
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 36 0.028
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 36 0.028
Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 31 0.60
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 31 0.80
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 31 1.1
AF026209-6|AAB71281.1| 340|Caenorhabditis elegans Serpentine re... 31 1.1
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 31 1.1
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC006753-3|AAN73854.2| 286|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 30 1.8
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 30 1.8
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 30 1.8
AF024503-2|AAG24099.1| 331|Caenorhabditis elegans Serpentine re... 30 1.8
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 3.2
Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 28 5.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 7.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 7.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 7.4
U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.8
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 27 9.8
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 27 9.8
AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine re... 27 9.8
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 581 ARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
A+ K H H IH P ++C CG+SFRQ+S
Sbjct: 141 AKSFTQKSHLDQHERIHTGVKP-FLCAFCGRSFRQRS 176
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ ++G + H IH++ Y+C C KSF Q+S
Sbjct: 114 KRFKARGGLQQHMRIHNNE-KAYVCTFCAKSFTQKS 148
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 581 ARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
A+ K H H IH P ++C CG+SFRQ+S
Sbjct: 207 AKSFTQKSHLDQHERIHTGVKP-FLCAFCGRSFRQRS 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ ++G + H IH++ Y+C C KSF Q+S
Sbjct: 180 KRFKARGGLQQHMRIHNNE-KAYVCTFCAKSFTQKS 214
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 581 ARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
A+ K H H IH P ++C CG+SFRQ+S
Sbjct: 141 AKSFTQKSHLDQHERIHTGVKP-FLCAFCGRSFRQRS 176
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ ++G + H IH++ Y+C C KSF Q+S
Sbjct: 114 KRFKARGGLQQHMRIHNNE-KAYVCTFCAKSFTQKS 148
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 581 ARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
A+ K H H IH P ++C CG+SFRQ+S
Sbjct: 207 AKSFTQKSHLDQHERIHTGVKP-FLCAFCGRSFRQRS 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ ++G + H IH++ Y+C C KSF Q+S
Sbjct: 180 KRFKARGGLQQHMRIHNNE-KAYVCTFCAKSFTQKS 214
>Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical
protein F52F12.4 protein.
Length = 318
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 557 VKKSNVAYARKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
V + NV + KG + H IH T P YIC +CG+ FR +S
Sbjct: 36 VHQCNVCNKMFMNYKG-LQQHSVIHTDTKP-YICDVCGRGFRYKS 78
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 599 KGHSRDHYAIHDSTLPKYICHICGKSFR 682
K + +H +H P Y+C CGK FR
Sbjct: 77 KSNMFEHRTVHTGYTP-YVCPFCGKQFR 103
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 611 RDHYAIHDSTLPKYICHICGKSFRQQSAHA 700
R H +HD IC +CGK + +SA A
Sbjct: 57 RKHQIVHDIPKKSIICEVCGKKYSSKSALA 86
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 605 HSRDHYAIHDSTLPKYICHICGKSFRQ 685
H RDH IH P + C ICGK F Q
Sbjct: 166 HLRDHKYIHQKDRP-FKCEICGKGFCQ 191
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQ 688
H H P Y C +CGK+FR+Q
Sbjct: 142 HERTHTDERP-YSCDVCGKAFRRQ 164
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQS 691
H +H P ++C +CGK+FRQ S
Sbjct: 70 HMPVHTGERP-FVCKVCGKAFRQAS 93
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQ 685
H IH P ++C ICGK F Q
Sbjct: 126 HVRIHQGFKP-FVCEICGKGFHQ 147
>AF026209-6|AAB71281.1| 340|Caenorhabditis elegans Serpentine
receptor, class j protein24 protein.
Length = 340
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 530 NFMLSRSRCLNLRNTVALMTTEWVYHYLHCFHNNHSEVHLIPY 402
N +L RC + T ++ + Y +L F NN H +PY
Sbjct: 88 NQLLLAVRCGFIGTTYGILHAHFAYRFLVLFKNNQLNKHFVPY 130
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 584 RKLVSKGHSRDHYAIHDSTLPKYICHICGKSFRQQS 691
++ S H H P YIC++CGKSF + S
Sbjct: 313 KQFASSSAKSHHEKTHSGERP-YICNVCGKSFTKNS 347
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 614 LYYVLC*PTFLHMRHWTFLPLAKLRQTGNFMLSRSRCLNLRNTVALMTTEWVYHYLH 444
LYY C P+F++ + ++ G + L CL + V L T+WV+ +LH
Sbjct: 212 LYYQFC-PSFIYRDSYPRTEKRDMKAAGLYFLE---CLAVIEFVNLTFTQWVFPWLH 264
>AC006753-3|AAN73854.2| 286|Caenorhabditis elegans Hypothetical
protein Y40A1A.1 protein.
Length = 286
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 413 DEPQNDYCENNANNDRPTQWSSVQQYFLDLSNVISI 520
+EP + NN +P +WSS+Q+ D +NV +
Sbjct: 42 NEPALEQLLNNCGQTKPEKWSSLQKGSFDYANVAKV 77
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQS 691
H IH T P Y C CGK F Q+S
Sbjct: 172 HLLIHSDTRP-YPCEYCGKRFHQKS 195
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 617 HYAIHDSTLPKYICHICGKSFRQQS 691
H IH T P Y C CGK F Q+S
Sbjct: 172 HLLIHSDTRP-YPCEYCGKRFHQKS 195
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 605 HSRDHYAIHDSTLPKYICHICGKSFRQ 685
H RDH IH P + C ICGK F Q
Sbjct: 170 HLRDHKYIHAKEKP-HKCEICGKGFCQ 195
>AF024503-2|AAG24099.1| 331|Caenorhabditis elegans Serpentine
receptor, class j protein5 protein.
Length = 331
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 566 TFLPLAKLRQTGNFMLSRSRCLNLRNTVALMTTEWVYHYLHCFHNNHSEVHLIPY 402
TF+ + N+ +S SRC + + AL+ +VY YL F+ + + L P+
Sbjct: 75 TFITDGPFSENANYAVS-SRCTFISMSYALLIIHFVYRYLILFYPHQVDKMLQPF 128
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 111 MAETKSITNFTKCRICLKEGGIPIYGPDCSTDLSYDVRTFGDIDISEDMSFLSICAVLVT 290
+ + + N LKE G+ P S ++S ++ GDID + + F ++ +VT
Sbjct: 693 LTANEEVINIESLLESLKELGVKPENPSESREISSNITHMGDIDTMQHIKFTAMRIAVVT 752
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 111 MAETKSITNFTKCRICLKEGGIPIYGPDCSTDLSYDVRTFGDIDISEDMSFLSICAVLVT 290
+ + + N LKE G+ P S ++S ++ GDID + + F ++ +VT
Sbjct: 693 LTANEEVINIESLLESLKELGVKPENPSESREISSNITHMGDIDTMQHIKFTAMRIAVVT 752
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 111 MAETKSITNFTKCRICLKEGGIPIYGPDCSTDLSYDVRTFGDIDISEDMSFLSICAVLVT 290
+ + + N LKE G+ P S ++S ++ GDID + + F ++ +VT
Sbjct: 693 LTANEEVINIESLLESLKELGVKPENPSESREISSNITHMGDIDTMQHIKFTAMRIAVVT 752
>Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical
protein T14C1.1 protein.
Length = 403
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 186 GPDCSTDLSYDVRTFGDIDISEDMSFLSICAVLVTNFYNVRYYFE 320
G DC + + E + FL+ C V+ + YNV ++FE
Sbjct: 169 GVDCFVQVCLPEKVRRAFSRKETVHFLATCVVIFSVLYNVPHFFE 213
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 192 DCSTDLSYDVRTFGDIDISEDMSFLSICAVLVTNFYNVRYYFERQLNNPKYS*VNQF*KT 371
D S L+YD+R F ++ +D+S L T+ + E+ NPK+ V KT
Sbjct: 384 DISKVLTYDLRLFDYVEKLKDLSSLKNIVETTTDDVQGKAAIEKMKANPKFEEV----KT 439
Query: 372 VLCLYRSSV 398
+L ++ +
Sbjct: 440 ILVTFQQDL 448
>Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical
protein F28H7.11 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -2
Query: 533 GNFMLSRSRCLNLRNTVALMTTEWVYHYLHCFHNNHSEVHLIPY 402
G ++L RC + T A++ ++Y Y+ F +N E + +P+
Sbjct: 88 GRYLLG-FRCSYITGTYAILHAHFLYRYMTLFCHNFLERYFLPH 130
>AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical
protein F41B5.9 protein.
Length = 502
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = -2
Query: 449 LHCFHNNHSEVHLIPYYN*TPIQTQNCFSKLIHSRVFRI 333
L+CFH+N+SE++ +++ + + C K + + F++
Sbjct: 71 LNCFHDNNSEINKNGFFSCKKCRLKKCLEKGMDASKFQL 109
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 393 NSDTDTELFFKIDSLKSISDCLAAFRNSIAHCKS 292
N++ +T+L + LKS D L +NS++H K+
Sbjct: 1351 NTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1384
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 393 NSDTDTELFFKIDSLKSISDCLAAFRNSIAHCKS 292
N++ +T+L + LKS D L +NS++H K+
Sbjct: 1424 NTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1457
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 393 NSDTDTELFFKIDSLKSISDCLAAFRNSIAHCKS 292
N++ +T+L + LKS D L +NS++H K+
Sbjct: 1424 NTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1457
>U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical
protein F55A4.5 protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 369 TVLCLYRSSVVVRNQMNLRMIIVKTMQIMIDPLSGHQCNSIS 494
T +C + + N+ R IVK ++ DPL GHQ N +S
Sbjct: 377 TNVCKTQKKLAAMNREPKRKTIVKDKKM--DPLYGHQINPVS 416
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 614 DHYAIHDSTLPKYICHICGKSFR 682
+H ++H + P Y+C CGKS R
Sbjct: 82 EHRSVHTALKP-YVCKFCGKSSR 103
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 614 DHYAIHDSTLPKYICHICGKSFR 682
+H ++H + P Y+C CGKS R
Sbjct: 65 EHRSVHTALKP-YVCKFCGKSSR 86
>AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine
receptor, class j protein6 protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 566 TFLPLAKLRQTGNFMLSRSRCLNLRNTVALMTTEWVYHYLHCFH 435
TF+ + N+ +S SRC + + AL+ +VY Y FH
Sbjct: 75 TFITDGFFTENANYAIS-SRCTFIAISYALLIIHFVYRYFILFH 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,534,297
Number of Sequences: 27780
Number of extensions: 313648
Number of successful extensions: 918
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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