Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0445
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.0  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   6.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 583 GLSGSLEDDDVVGQP 539
           G +GSLEDDD +  P
Sbjct: 222 GSAGSLEDDDNISDP 236


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 182 WANSRSTPRSEASSRISVCPSLSTW 256
           WA   STP ++ S  +   P    W
Sbjct: 412 WARPPSTPSADGSKPVQTTPKPGQW 436


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +3

Query: 477 IQGTAAVA--VAGYSPVSDSHRRGCPTTSSSSREPERPLWVSR 599
           I+GT  V+     YS V D HRRG      S    E P + S+
Sbjct: 219 IRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWSQ 261


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +3

Query: 477 IQGTAAVA--VAGYSPVSDSHRRGCPTTSSSSREPERPLWVSR 599
           I+GT  V+     YS V D HRRG      S    E P + S+
Sbjct: 226 IRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWSQ 268


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -1

Query: 266 GVRTTSIVMGRH*CGLMPPSAV*SASLPTGMPIPHAPK 153
           G +T     G H  G  P     +  LP  +P P + +
Sbjct: 246 GAQTVGASFGLHATGSAPSPTAGAGGLPPQVPSPRSQR 283


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 170 WASLWANSRSTP 205
           W S W N  +TP
Sbjct: 86  WVSFWLNRNATP 97


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +2

Query: 242 SLSTWYEHPVDAG 280
           S+++W+EH  ++G
Sbjct: 425 SMNSWFEHETESG 437


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +2

Query: 242 SLSTWYEHPVDAG 280
           S+++W+EH  ++G
Sbjct: 425 SMNSWFEHETESG 437


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +2

Query: 242 SLSTWYEHPVDAG 280
           S+++W+EH  ++G
Sbjct: 425 SMNSWFEHETESG 437


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +2

Query: 167 GWASLWANSRSTP 205
           GW ++W + + TP
Sbjct: 314 GWTTVWDDEQKTP 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,975
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)