Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0445
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 141 4e-34
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 139 2e-33
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 137 6e-33
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 122 3e-28
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 120 7e-28
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 101 5e-22
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 100 1e-21
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 28 5.5
10_08_0729 + 20156740-20156893,20157008-20157348 28 7.3
05_01_0140 - 931039-931146,932659-932875,933117-933484,933644-93... 28 7.3
09_03_0006 + 11426346-11426420,11426733-11427452 27 9.7
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 27 9.7
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 141 bits (342), Expect = 4e-34
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
QK+G +YRRP+GL+I++ DKG + +VLKNWPE ++ IVVTDGERILGLGDLG GMGIP
Sbjct: 127 QKYGSIYRRPQGLYISLKDKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIP 186
Query: 181 VGKLALYTALGGIKPHQCLPITIDV 255
VGKL+LYTALGG++P CLPITIDV
Sbjct: 187 VGKLSLYTALGGVRPSACLPITIDV 211
Score = 113 bits (273), Expect = 9e-26
Identities = 52/85 (61%), Positives = 63/85 (74%)
Frame = +3
Query: 255 GTNTQSMLDDPLYIGLRQRRVRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRL 434
GTN +S+L+D YIGL+QRR G +Y ELL+EFM AV + YG+ LVQFEDF N NAF L
Sbjct: 212 GTNNESLLNDEFYIGLKQRRATGEEYHELLEEFMTAVKQNYGEKVLVQFEDFANHNAFDL 271
Query: 435 LEKYRNKYCTFNDDIQGTAAVAVAG 509
L KY + FNDDIQGTA+V +AG
Sbjct: 272 LAKYSKSHLVFNDDIQGTASVVLAG 296
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 139 bits (336), Expect = 2e-33
Identities = 59/85 (69%), Positives = 75/85 (88%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
QK+G ++R+P+GL++++ DKG V DVL+NWPE +++ IVVTDGERILGLGDLG GMGIP
Sbjct: 196 QKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIP 255
Query: 181 VGKLALYTALGGIKPHQCLPITIDV 255
VGKL+LYTALGG++P CLPITIDV
Sbjct: 256 VGKLSLYTALGGVRPSACLPITIDV 280
Score = 111 bits (266), Expect = 6e-25
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = +3
Query: 255 GTNTQSMLDDPLYIGLRQRRVRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRL 434
GTN + +L+D YIGLRQRR G +Y EL++EFM AV + YG+ L+QFEDF N NAF L
Sbjct: 281 GTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDL 340
Query: 435 LEKYRNKYCTFNDDIQGTAAVAVAG 509
L KY + FNDDIQGTA+V +AG
Sbjct: 341 LAKYSKSHLVFNDDIQGTASVVLAG 365
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 137 bits (332), Expect = 6e-33
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
QK+G ++RRP+GL+I++ +KG + ++L+NWPE ++ IVVTDGERILGLGDLG GMGIP
Sbjct: 130 QKYGSIFRRPQGLYISLKEKGRILELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIP 189
Query: 181 VGKLALYTALGGIKPHQCLPITIDV 255
VGKLALYTALGG++P CLPITIDV
Sbjct: 190 VGKLALYTALGGVRPSACLPITIDV 214
Score = 117 bits (281), Expect = 9e-27
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +3
Query: 255 GTNTQSMLDDPLYIGLRQRRVRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRL 434
GTN + +L D YIGLRQ+R G +Y +LLDEFM A+ + YGQ LVQFEDF N NAF L
Sbjct: 215 GTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFEDFANYNAFTL 274
Query: 435 LEKYRNKYCTFNDDIQGTAAVAVAG 509
LEKYR FNDDIQGTAAV +AG
Sbjct: 275 LEKYRANNLVFNDDIQGTAAVVLAG 299
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 122 bits (293), Expect = 3e-28
Identities = 51/74 (68%), Positives = 65/74 (87%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
QK+G +YRRP+GL+I++ DKG + +VLKNWPE ++ IV+TDGERILGLGDLG GMGIP
Sbjct: 36 QKYGSIYRRPQGLYISLKDKGKILEVLKNWPERSIQVIVITDGERILGLGDLGCQGMGIP 95
Query: 181 VGKLALYTALGGIK 222
VGKL+LYTALGG++
Sbjct: 96 VGKLSLYTALGGVR 109
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 120 bits (290), Expect = 7e-28
Identities = 51/75 (68%), Positives = 65/75 (86%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
QK+G ++ RP+GL+I++ +KG + +VLKNWPE ++ IVVTDGERILGLGDLG GMGIP
Sbjct: 150 QKYGSIFSRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIP 209
Query: 181 VGKLALYTALGGIKP 225
VGKLALYTALGG++P
Sbjct: 210 VGKLALYTALGGVRP 224
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +3
Query: 327 DYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQGTAAVAVA 506
+Y + L EFM AV + YG+ L+QFEDF N NAF LL KY + FNDDIQGTA+V ++
Sbjct: 227 EYADFLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLS 286
Query: 507 G 509
G
Sbjct: 287 G 287
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 101 bits (242), Expect = 5e-22
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
+ + ++RRPRG++ + DKG + ++ NWP V IVVTDG RILGLGDLG G+GIP
Sbjct: 152 ENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIP 211
Query: 181 VGKLALYTALGGIKPHQCLPITIDV 255
+GKL +Y A GI P + LPI +DV
Sbjct: 212 IGKLDVYVAAAGINPQKVLPIMLDV 236
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/79 (36%), Positives = 38/79 (48%)
Frame = +3
Query: 141 GSGRLGRMRDGHPCGQTXXXXXXXXXXXXSVSAHHYRRGTNTQSMLDDPLYIGLRQRRVR 320
G G LG G P G+ V GTN +L+D LY+GLRQ R+
Sbjct: 199 GLGDLGVQGIGIPIGKLDVYVAAAGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLE 258
Query: 321 GPDYDELLDEFMRAVVRRY 377
G +Y ++DEFM AV R+
Sbjct: 259 GEEYLSVVDEFMEAVHARW 277
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 100 bits (239), Expect = 1e-21
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +1
Query: 1 QKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIP 180
Q + ++RRPRG++ + D+G + ++ NWP V IVVTDG RILGLGDLG G+GI
Sbjct: 189 QNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVHGIGIA 248
Query: 181 VGKLALYTALGGIKPHQCLPITIDV 255
+GKL LY A GI P + LP+ IDV
Sbjct: 249 IGKLDLYVAAAGINPQRVLPVMIDV 273
Score = 90.6 bits (215), Expect = 9e-19
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Frame = +3
Query: 255 GTNTQSMLDDPLYIGLRQRRVRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRL 434
GTN + +L DPLY+GL++ R+ G +Y ++DEFM AV R+ N +VQFEDF + AFRL
Sbjct: 274 GTNNEKLLKDPLYLGLQEHRLEGEEYVAIIDEFMEAVFARW-PNVIVQFEDFQSKWAFRL 332
Query: 435 LEKYRNKYCTFNDDIQGTA---AVAVAGYSPVSDSHR 536
L++YR Y FNDD+Q A A+ AG V+ + R
Sbjct: 333 LQRYRKTYRMFNDDVQINALSLALTSAGIGVVNAASR 369
>04_04_1630 -
34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 190 VCPQGCPSRMRPSRPDPEYVLRRLQQWRGRPSPAS 86
V P+ R +PS P +YV RRL + P PA+
Sbjct: 302 VSPKTTAKRAKPSPPPSDYVRRRLLEPPRPPPPAA 336
>10_08_0729 + 20156740-20156893,20157008-20157348
Length = 164
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 526 THTEEAVRQRHRLPGSRRGRFGYRGTVRYGHE 621
T ++AVR+R RL G R+ Y+G GH+
Sbjct: 92 TGRDKAVRERSRLIGMRKTLVFYKGRAPNGHK 123
>05_01_0140 -
931039-931146,932659-932875,933117-933484,933644-933733
Length = 260
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 459 CTFNDDIQGTAAVAVAGYSPVSDSHRRG 542
C N+D QG+ AV ++G P ++ HR G
Sbjct: 149 CLLNNDTQGSPAVGMSGSLP-AERHRSG 175
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +3
Query: 492 AVAVAGYSPVSDSHR----RGCPTTSSSSREPERPLWVSRNCALW 614
A+ V P S S R R P +S S R RP + R CA W
Sbjct: 32 AIVVLAAPPASSSQRHCAIRPVPPSSFSRRRRRRPPALRRCCAAW 76
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 168 PACAQVAQTQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRDEEA 34
P+ A S G G V P ++N++Y L+ R+EEA
Sbjct: 15 PSPRAAAAAAGLGSGGGGGGGSVHGSPDIRNVIYERLVAIRNEEA 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,806,969
Number of Sequences: 37544
Number of extensions: 364652
Number of successful extensions: 1328
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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