Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0440
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 76  TRQENHQNVSSPLYSF-LFYFCICF 5
           +RQE+   +   +Y+F LFY C CF
Sbjct: 305 SRQEDTDTLVV-IYTFNLFYLCFCF 328


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 76  TRQENHQNVSSPLYSF-LFYFCICF 5
           +RQE+   +   +Y+F LFY C CF
Sbjct: 261 SRQEDTDTLVV-IYTFNLFYLCFCF 284


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = -3

Query: 463 NKYVLNECKCITNHYTSSSERIRGFH 386
           N+Y+   CK    HY +   ++   H
Sbjct: 199 NQYIKQVCKLNNGHYKNFLSQVEIIH 224


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = -3

Query: 463 NKYVLNECKCITNHYTSSSERIRGFH 386
           N+Y+   CK    HY +   ++   H
Sbjct: 24  NQYIKQVCKLNNGHYKNFLSQVEIIH 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,764
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)