Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0440
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   6.1  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 76  TRQENHQNVSSPLYSFLFYFCICF 5
           TR+E H  + + +   +F FCI F
Sbjct: 195 TREEKHLPIGASVLFEIFPFCIVF 218


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 115 ENSILQRVITCLFTRQENHQNVSSPLYSFL 26
           E   L+  +  + TRQ+    +  P+Y  L
Sbjct: 133 EGQFLKAFVAAVLTRQDTQSVIFPPVYEIL 162


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 218 KKNNYILYFTNYNKERTRRRC*LLN**CFNIIKNRKLDITARN 90
           KK  ++   T +N+E+ R R   L+    N + N   DIT  N
Sbjct: 68  KKVGFVNADTTFNEEKFRERTTKLDSEQVNRLVNNCKDITESN 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,018
Number of Sequences: 438
Number of extensions: 3207
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)