Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0438
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 120 3e-28
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 89 9e-19
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 85 1e-17
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 73 5e-14
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 72 8e-14
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 66 5e-12
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 65 9e-12
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 64 2e-11
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 62 7e-11
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 61 2e-10
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 61 2e-10
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 60 3e-10
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 60 5e-10
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 59 8e-10
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 59 8e-10
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 55 1e-08
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 52 7e-08
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 52 1e-07
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 50 3e-07
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 42 1e-04
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 36 0.007
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 35 0.015
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 31 0.19
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 31 0.24
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 31 0.24
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 30 0.43
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 29 0.57
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.3
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 28 1.7
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 28 1.7
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 28 1.7
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 27 2.3
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 27 3.0
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 27 3.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 4.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 5.3
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.0
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 7.0
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 7.0
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 25 9.2
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 25 9.2
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 25 9.2
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 120 bits (288), Expect = 3e-28
Identities = 56/85 (65%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKA 687
+KP+V+W D+AG V+LPIK P LF+ R PW GILL+GPPGTGKSYLAKA
Sbjct: 122 EKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSHGRKPWSGILLYGPPGTGKSYLAKA 181
Query: 688 VATEANNSTFFSVSSSDLVSKWLGE 762
VATEA STFFS+SSSDLVSKW+GE
Sbjct: 182 VATEA-GSTFFSISSSDLVSKWMGE 205
Score = 39.5 bits (88), Expect = 5e-04
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = +2
Query: 257 VEYFLHAVKYEAQGERAKESIRAKCLQYLDRA 352
++YF+ A+KYE + E++KE IR+K ++YLDRA
Sbjct: 37 LDYFMMALKYE-KNEKSKEIIRSKVIEYLDRA 67
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 88.6 bits (210), Expect = 9e-19
Identities = 45/81 (55%), Positives = 55/81 (67%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATE 699
V WSD+AG VI P P LF G R P +G+LLFGPPGTGK+ LA+AVATE
Sbjct: 376 VYWSDIAGLDDAKNSLKEAVIYPFLRPELFQGLREPVQGMLLFGPPGTGKTMLARAVATE 435
Query: 700 ANNSTFFSVSSSDLVSKWLGE 762
A +TFFS+S+S L SK+LG+
Sbjct: 436 A-KATFFSISASSLTSKYLGD 455
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 84.6 bits (200), Expect = 1e-17
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATE 699
V W D++G V+ P P LF G R P +G+LLFGPPGTGK+ LA+AVATE
Sbjct: 456 VHWDDISGLEFAKHSLKEAVVYPFLRPDLFQGLREPARGMLLFGPPGTGKTMLARAVATE 515
Query: 700 ANNSTFFSVSSSDLVSKWLGE 762
+ S FFS+S+S L SK+LGE
Sbjct: 516 -SRSVFFSISASSLTSKFLGE 535
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 72.9 bits (171), Expect = 5e-14
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 514 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVA 693
P V W D+ G + LP++FP LF+ P G+LL+GPPGTGK+ LAKAVA
Sbjct: 650 PKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKAVA 709
Query: 694 TEANNSTFFSVSSSDLVSKWLGE 762
TE + F S+ +L++ ++GE
Sbjct: 710 TEL-SLEFVSIKGPELLNMYVGE 731
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 72.1 bits (169), Expect = 8e-14
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 514 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAV 690
P+V+W D+ G V +P+ + F + P KG+L FGPPGTGK+ LAKA+
Sbjct: 492 PNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAI 551
Query: 691 ATEANNSTFFSVSSSDLVSKWLGERRS 771
A E ++ F SV +L+S W GE S
Sbjct: 552 ANEC-SANFISVKGPELLSMWFGESES 577
Score = 62.5 bits (145), Expect = 7e-11
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 696
V + D+ G V LP++ P LF I P +GIL++GPPGTGK+ +A+AVA
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 697 EANNSTFFSVSSSDLVSKWLGERRS 771
E + FF ++ +++SK GE S
Sbjct: 281 E-TGAFFFLINGPEIMSKMAGESES 304
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 66.1 bits (154), Expect = 5e-12
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAK 684
K P + V G + LP+K P LF IP KGILL+GPPGTGK+ LA+
Sbjct: 138 KIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLAR 197
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA + F VS S+LV K++GE
Sbjct: 198 AVA-HHTDCKFIRVSGSELVQKYIGE 222
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 65.3 bits (152), Expect = 9e-12
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
+KP V + DV G V LP+ P F I P KGI+L+GPPGTGK+ A+
Sbjct: 172 EKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCAR 231
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA ++TF V S+LV K++GE
Sbjct: 232 AVANR-TDATFIRVIGSELVQKYVGE 256
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 64.1 bits (149), Expect = 2e-11
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
K P ++D+ G V LP+ P L+ I P KG++L+G PGTGK+ LAK
Sbjct: 184 KAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 243
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA + ++TF V S+L+ K+LG+
Sbjct: 244 AVANQ-TSATFLRVVGSELIQKYLGD 268
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 62.5 bits (145), Expect = 7e-11
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +1
Query: 493 RSYCGKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGK 669
+++ G V +S + G V LP + P LF I P +G+LL+GPPGTGK
Sbjct: 267 QNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGK 326
Query: 670 SYLAKAVATEANNSTFFSVSSSDLVSKWLGERRS 771
+ + +AVA EA N+ F++ +V K+LGE S
Sbjct: 327 TMVMRAVAAEA-NAQVFTIDGPSVVGKYLGETES 359
Score = 59.7 bits (138), Expect = 5e-10
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 493 RSYCGKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGK 669
R + + P+V WSD+ G V P+ F+ + P KG+LL+GPPG K
Sbjct: 536 REFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSK 595
Query: 670 SYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
+ AKA+ATE F +V +L K++GE
Sbjct: 596 TITAKAIATE-TGLNFIAVKGPELFDKFVGE 625
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 61.3 bits (142), Expect = 2e-10
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT---GKRIPWKGILLFGPPGTGKSYLAKAV 690
V + D+ G V+ P+K+P +F G KG+LL+GPPG GK+ LAKA+
Sbjct: 86 VSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKAL 145
Query: 691 ATEANNSTFFSVSSSDLVSKWLGE 762
A + + +TF +VS L KW GE
Sbjct: 146 AKQ-SQATFINVSVGLLTDKWFGE 168
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 60.9 bits (141), Expect = 2e-10
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKAV 690
P V W+++ ++ PIK P L+ I G+LL+GPPG GK+ LAKAV
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAV 546
Query: 691 ATEANNSTFFSVSSSDLVSKWLGE 762
A E + + F S+ +L++K++GE
Sbjct: 547 ANE-SKANFISIRGPELLNKYVGE 569
Score = 53.6 bits (123), Expect = 3e-08
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 696
+ SD+ G V +PIK P ++ I P +G+LL GPPG GK+ LA A+A
Sbjct: 171 ISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALAN 230
Query: 697 EANNSTFFSVSSSDLVSKWLGE 762
E F S+S+ +VS GE
Sbjct: 231 EL-GVPFISISAPSIVSGMSGE 251
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 60.1 bits (139), Expect = 3e-10
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 696
+ ++ V G + LP+K P LF I P KG+LL+GPPGTGK+ LA+AVA
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 697 EANNSTFFSVSSSDLVSKWLGE 762
F V SS +V K++GE
Sbjct: 189 SL-GVNFLKVVSSAIVDKYIGE 209
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 59.7 bits (138), Expect = 5e-10
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
+KP ++SD+ G ++LP++ F + P KG L+FGPPGTGK+ LA+
Sbjct: 178 EKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR 237
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
A A + +N+TF +++ LV ++G+
Sbjct: 238 ACAAQ-SNATFLKLAAPQLVQMFIGD 262
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 58.8 bits (136), Expect = 8e-10
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
++P V ++DV G V LP+ L+ I P +G+LL+GPPGTGK+ L K
Sbjct: 127 ERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVK 186
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA + + F V S+ V K+LGE
Sbjct: 187 AVA-NSTAANFIRVVGSEFVQKYLGE 211
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 58.8 bits (136), Expect = 8e-10
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +1
Query: 469 EKTTRET*RSYCGKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 645
EKT R T + ++ ++ + G V+LP+ +P +F I P +G+L
Sbjct: 354 EKTIRST--DPFANRENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLF 411
Query: 646 FGPPGTGKSYLAKAVA----TEANNSTFFSVSSSDLVSKWLGE 762
GPPGTGK+ +A+ +A T+ +FF SD +SKW+GE
Sbjct: 412 HGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGE 454
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 54.8 bits (126), Expect = 1e-08
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +1
Query: 505 GKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLA 681
G + + V G V+LP+ +P +F + P +G+L GPPGTGK+ +A
Sbjct: 258 GVDSSLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMA 317
Query: 682 KAVA----TEANNSTFFSVSSSDLVSKWLGE 762
+A+A +E +F+ +D +SKW+GE
Sbjct: 318 RALAAACSSENKKVSFYMRKGADCLSKWVGE 348
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 52.4 bits (120), Expect = 7e-08
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVA 693
+K++DVAG V +K P + G +IP +G +L GPPGTGK+ LAKA A
Sbjct: 293 IKFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIP-RGAILSGPPGTGKTLLAKATA 350
Query: 694 TEANNSTFFSVSSSDLVSKWLG 759
EA N F SVS S+ + ++G
Sbjct: 351 GEA-NVPFLSVSGSEFLEMFVG 371
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 KPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKA 687
K ++W D+AG + P+K+ ++ R+ GILLFG PG GK+YLA A
Sbjct: 600 KSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASA 659
Query: 688 VATEANNSTFFSVSSSDLVSKWLGE 762
+++ F S+ +L+ K++G+
Sbjct: 660 ISS-TFPVQFISIKGPELLDKYIGK 683
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 50.4 bits (115), Expect = 3e-07
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 517 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAV 690
+V++SDV G V ++ P FT G ++P +G+LL GPPGTGK+ LA+AV
Sbjct: 263 NVRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLP-RGVLLTGPPGTGKTMLARAV 320
Query: 691 ATEANNSTFFSVSSSDLVSKWLG 759
A EA N FF +S S ++G
Sbjct: 321 AGEA-NVPFFFMSGSQFDEMYVG 342
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
KGILL+GPPGTGK+ +A+ + N V+ ++++K++G+
Sbjct: 305 KGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQ 348
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTF-FSVSSSDLVSKWLGERRSW 774
K + L GPPG GK+ + K++A+ N F FSV V++ G RR++
Sbjct: 572 KIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTY 620
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 619 RIPWKGILLFGPPGTGKSYLAKAVATEANNST-FFSVSSSDLVS 747
RI + IL+ GPP TGK+ +A +A + T F ++S+S++ S
Sbjct: 62 RIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYS 105
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 604 LFTGKRIPWKGILLFGPPGTGKSYLAKAVATE 699
L K+ KG+L G GTGK+ LA A+A E
Sbjct: 56 LIKSKKFGGKGVLFAGGAGTGKTALALAIAQE 87
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 622 IPWK-GILLFGPPGTGKSYLAKAVATE 699
IP++ G LL+GPPG+GK+ A+A E
Sbjct: 239 IPYRRGYLLYGPPGSGKTSFLYALAGE 265
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTFFSVS 729
K +++FGP G GKS L K + + + FSVS
Sbjct: 19 KPVVVFGPSGVGKSTLLKRLLKDHGDKLGFSVS 51
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 29.9 bits (64), Expect = 0.43
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 628 WKGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWL 756
+K +LL GPPG GK+ A VA + +++SD SK L
Sbjct: 409 YKAVLLSGPPGIGKTTAAHLVA-KLEGYDVLELNASDTRSKRL 450
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAVATEANNSTFFSVSS 732
+ + G G+GKS L AVA EA +F++SS
Sbjct: 382 VTVTGEKGSGKSNLLNAVADEARKFGYFAMSS 413
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAVATEANNSTFFSVS 729
+ + GPPGTGKS L K++ + T ++
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQIT 107
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = -3
Query: 755 SHLETRSDDETEKNVELLASVATAFAKYDLPVPGGPNNKMPFHGILLPVNKCGNFIGRIT 576
S L+ SD+ + + V AFA PN + F +L GNF+ T
Sbjct: 415 SFLDNVSDELRGSTAQYITEVTNAFA---------PNKRWHFDTLLRVFKSAGNFVSEST 465
Query: 575 ASFNASLAASRP 540
S L AS P
Sbjct: 466 LSTFLRLIASAP 477
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 658 QGVQIIRCPSMVFSCQ*TNVEILLVELQPLSML 560
+ +QI R P + F T EIL+ +++PL+++
Sbjct: 16 RAIQICRIPKVSFFVVLTETEILIYQIRPLTLI 48
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 640 LLFGPPGTGKSYLA-KAVATEANNS 711
++ GPPGTGKS++ KA+ T N+
Sbjct: 390 IIQGPPGTGKSFVTLKAIETLLENT 414
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 625 PWKGILLFGPPGTGKSYLAKAVAT 696
P L GP GTGK+ L KA+A+
Sbjct: 613 PIASFLFCGPSGTGKTLLTKALAS 636
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAVA--TEANN 708
I++ G PGTGK+ LA+ VA TE N
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELEN 36
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAVATEAN----NSTFFSV 726
I+L G P TGKSY+ ++ N N FFSV
Sbjct: 146 IILVGIPATGKSYIGSKLSRYYNWLKYNCRFFSV 179
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANN 708
K ILL G PG GK+ L A+A E +
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGH 1585
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 647 NNKMPFHGILLPVNKCGNFIGR--ITASFNASLAASRPAT 534
+N G+LLP+NKC + R I A +++ AS T
Sbjct: 2177 SNPEALDGLLLPLNKCFQKVARDHIVACMQSAIQASGKVT 2216
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 77 YYYKKTRQI*IYVPTNSI 24
YY+K+ RQI Y PT+S+
Sbjct: 480 YYHKRHRQISPYYPTSSV 497
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +1
Query: 625 PWKGI-LLFGPPGTGKSYLAKAVA 693
P+K + ++ GP G+GK+ +AKAV+
Sbjct: 12 PYKYVFVVIGPAGSGKTTMAKAVS 35
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 625 PWKGILLFGPPGTGKSYLAKAVA 693
P L GP G GK+ L KA+A
Sbjct: 531 PLASFLFLGPTGVGKTALTKALA 553
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 443 HYHSSYHHFWIPHPLLVFSFDLF*DIPLIFQLYQDIEG-ILHECFLLPFHL 294
+++ + +W + + F F L IP++F L+ I G LH + HL
Sbjct: 302 YWNVGFLRYWTLNNIPNFLFALLSIIPILFALFYSISGSTLHSFRSIKSHL 352
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 649 GPPGTGKSYLAKAVATE 699
GP G+GKS LA A+ TE
Sbjct: 32 GPQGSGKSTLASALDTE 48
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 610 TGKRIPWKGILLFGPPGTGKSYLAKAVA 693
+ R+P +L +GPPGTGK+ A A
Sbjct: 52 SSNRVPH--MLFYGPPGTGKTSTILACA 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,867,602
Number of Sequences: 5004
Number of extensions: 53955
Number of successful extensions: 235
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -