Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0438
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 73 1e-28
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 65 7e-11
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 64 9e-11
SB_35613| Best HMM Match : MIT (HMM E-Value=5.1e-09) 64 9e-11
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 63 3e-10
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 58 8e-09
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 56 4e-08
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 54 2e-07
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 52 5e-07
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 50 2e-06
SB_732| Best HMM Match : AAA (HMM E-Value=0) 47 1e-05
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 47 1e-05
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 46 3e-05
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 36 0.028
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 36 0.049
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 32 0.45
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 30 1.8
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26) 30 2.4
SB_2014| Best HMM Match : MAM (HMM E-Value=0) 30 2.4
SB_11352| Best HMM Match : LRR_1 (HMM E-Value=0.0019) 30 2.4
SB_59431| Best HMM Match : Prefoldin (HMM E-Value=0.4) 29 3.2
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 29 3.2
SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 5.6
SB_755| Best HMM Match : MIT (HMM E-Value=0.055) 29 5.6
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 5.6
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 28 7.4
SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 28 9.8
SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22) 28 9.8
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 9.8
SB_22684| Best HMM Match : PA (HMM E-Value=4.5e-06) 28 9.8
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 28 9.8
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 73.3 bits (172), Expect(2) = 1e-28
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFG 651
+KP+VKWSD+AG VILPIKFPHLFTGKR PW+GILL+G
Sbjct: 90 EKPNVKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRTPWRGILLYG 137
Score = 71.7 bits (168), Expect(2) = 1e-28
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +1
Query: 658 GTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
GTGKSYLAKAVATEANNSTF SVSSSDLVSKWLGE
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGE 209
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2
Query: 284 YEAQGERAKESIRAKCLQYLDRA 352
YEAQG++AKESIR+KC QYLDRA
Sbjct: 10 YEAQGDKAKESIRSKCFQYLDRA 32
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = +1
Query: 493 RSYCGKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKS 672
R K P+V W+D+A V+LP+ P F G R PW+G+L+ GPPGTGK+
Sbjct: 238 RDILQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIRRPWRGVLMVGPPGTGKT 297
Query: 673 YLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
LAKAVATE +TFF+VSSS L SK+ GE
Sbjct: 298 MLAKAVATEC-GTTFFNVSSSTLTSKYRGE 326
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKA 687
K P + W DV G + LP+ P LF + G+LL+GPPGTGK+ +AKA
Sbjct: 805 KIPDISWKDVGGLDSVKEEILDTIQLPLLHPELFAAG-LRRSGVLLYGPPGTGKTLMAKA 863
Query: 688 VATEANNSTFFSVSSSDLVSKWLGE 762
VATE + F SV +L++ ++G+
Sbjct: 864 VATEC-SLNFLSVKGPELINMYVGQ 887
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAV 690
P V WSDV G V P+K P F I P +GIL++GPPG K+ +A+A+
Sbjct: 532 PKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARAL 591
Query: 691 ATEANNSTFFSVSSSDLVSKWLGE 762
ATE + F ++ +L SKW+GE
Sbjct: 592 ATE-SGLNFIAIKGPELFSKWVGE 614
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 511 KPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAKA 687
K V + + G + +P+ P LFT +P +GILL+GP GTGK+ +A+A
Sbjct: 250 KKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARA 309
Query: 688 VATEANNSTFFSVSSSDLVSKWLGE 762
VA E FF ++ +++S++ GE
Sbjct: 310 VANE-TGVHFFCINGPEVLSRYYGE 333
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
+KP V +SD+ G V P+ P F I P KG+LLFGPPGTGK+ A+
Sbjct: 77 EKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 136
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA ++ F V S+LV K++GE
Sbjct: 137 AVANR-TDACFIRVIGSELVQKYVGE 161
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAV 690
P+V W D+ G V P++ P F + P KG+L +GPPG GK+ LAKA+
Sbjct: 305 PNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 364
Query: 691 ATEANNSTFFSVSSSDLVSKWLGE 762
A E + F S+ +L++ W GE
Sbjct: 365 ANEC-QANFISIKGPELLTMWFGE 387
>SB_35613| Best HMM Match : MIT (HMM E-Value=5.1e-09)
Length = 86
Score = 64.5 bits (150), Expect = 9e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +2
Query: 257 VEYFLHAVKYEAQGERAKESIRAKCLQYLDRA 352
VEYFLHA+KYEAQG++AKESIR+KC QYLDRA
Sbjct: 29 VEYFLHAIKYEAQGDKAKESIRSKCFQYLDRA 60
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 174 KAIDLVTKATEEDKNKNYEEALRLYEH 254
KAIDLVTKATEEDK NYEEAL+LYEH
Sbjct: 1 KAIDLVTKATEEDKAGNYEEALKLYEH 27
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 64.5 bits (150), Expect = 9e-11
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAK 684
K P + V G + LP+K P LF I KG+LL+GPPGTGK+ LA+
Sbjct: 170 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLAR 229
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA TF VS S+LV K++GE
Sbjct: 230 AVA-HHTECTFIRVSGSELVQKFIGE 254
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 520 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 696
VK+ V G ++ P+ +P +F +I P +G+L FGPPGTGK+ +A+A+A
Sbjct: 881 VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALAN 940
Query: 697 EANNS----TFFSVSSSDLVSKWLGE 762
E + +FF +D +SKW+GE
Sbjct: 941 ECSQGDKKVSFFMRKGADCLSKWVGE 966
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
K P ++D+ G V LP+ P L+ I P KG++L+G PGTGK+ LAK
Sbjct: 373 KAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAK 432
Query: 685 AVATEANNSTFFSVSSSDLVSKWL 756
AVA + ++TF V S+L+ K+L
Sbjct: 433 AVANQ-TSATFLRVVGSELIQKYL 455
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 58.0 bits (134), Expect = 8e-09
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 KKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 684
+KP+V ++++ G V LP+ L+ I P +G+LL+GPPG GK+ LAK
Sbjct: 157 EKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAK 216
Query: 685 AVATEANNSTFFSVSSSDLVSKWLGE 762
AVA + F V S+ V K+LGE
Sbjct: 217 AVA-HHTTAAFIRVVGSEFVQKYLGE 241
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKG-ILLFGPPGTGKSYLAKAVA 693
H+ W +V G ++ P KF LF + +G +LL+GPPGTGK+ LA VA
Sbjct: 663 HLGWENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVA 722
Query: 694 TEANNSTFFSVSSSDLVSKWLG 759
E F S+ +L+SK++G
Sbjct: 723 KEC-GLNFISIKGPELLSKYIG 743
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +1
Query: 613 GKRIPWKGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLG 759
G +IP KG LL GPPGTGK+ LAKAVATEA + F S++ SD V + G
Sbjct: 154 GAKIP-KGALLVGPPGTGKTLLAKAVATEA-DVPFLSMAGSDFVEMFAG 200
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 523 KWSDVAGXXXXXXXXXXXVILPIKFPHLF--TGKRIPWKGILLFGPPGTGKSYLAKAVAT 696
+W DVAG V +K P + G +IP KG +L GPPGTGK+ LAKAVA
Sbjct: 46 EWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIP-KGAILSGPPGTGKTLLAKAVAG 103
Query: 697 EANNSTFFSVSSSDLVSKWLG 759
EA F S+S S+ + ++G
Sbjct: 104 EA-GVPFLSISGSEFLEMFVG 123
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 523 KWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVAT 696
+W DV G + P+ P F G R P +G+LL+GPPG K+ L +A A+
Sbjct: 482 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRP-RGVLLYGPPGCCKTTLVRAAAS 540
Query: 697 EANNSTFFSVSSSDLVSKWLGE 762
+ + TF S+S + L S ++G+
Sbjct: 541 -STHCTFMSLSCAQLFSSYVGD 561
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 577 VILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKW 753
V P+ +P F+ I KGILL G PG GK+ L AT S + +D+
Sbjct: 227 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHK-ATVDCGIKLVSTNGTDVFGPH 285
Query: 754 LGE 762
GE
Sbjct: 286 AGE 288
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 523 KWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVAT 696
+W DV G + P+ P F G R P +G+LL+GPPG K+ L +A A+
Sbjct: 11 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRP-RGVLLYGPPGCCKTTLVRAAAS 69
Query: 697 EANNSTFFSVSSSDLVSKWLGE 762
+ + TF S+S + L S ++G+
Sbjct: 70 -STHCTFMSLSCAQLFSSYVGD 90
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
KGILLFGPPGTGK+ +A+ + T N +S ++++K++GE
Sbjct: 183 KGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGE 226
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 586 PIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
P++ P F+ + GILL GPPG GK+ LAKA+A E + F SV +L++ ++GE
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANE-SGINFISVKGPELLNMYVGE 60
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 460 SRKEKTTRET*RSYCGKKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKG 636
S KE T + S+ + VK++D+ G +++ + P +FT + P G
Sbjct: 655 SSKEGTEKPL-ESFASTQSSVKFADIGGCSNTLEQVGK-LLVHMCHPEVFTTLGVTPTTG 712
Query: 637 ILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGE 762
LL GPPG GK+ LA A+A E F ++++++VS GE
Sbjct: 713 FLLHGPPGCGKTLLAHAIAGEL-EMPFLKLAATEIVSGVSGE 753
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 586 PIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLG 759
P KF L G ++P G+LL G PGTGK+ LAKAVA EA FF S S+ ++G
Sbjct: 153 PEKFKRL--GGKLP-TGVLLIGSPGTGKTLLAKAVAGEA-GVPFFFCSGSEFDEMFVG 206
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 586 PIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVS 747
P++ P F+ + GILL GPPG GK+ LAKA+A E + F SV +L++
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANE-SGINFISVKGPELLN 55
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 517 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPG 660
++ +SDV G + LP+ P LF I P KG LLFGPPG
Sbjct: 131 NISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 35.5 bits (78), Expect = 0.049
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 598 PHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEANNS 711
P + + IP++ G LL+GPPG GKS +A+A E + S
Sbjct: 211 PRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGELDYS 249
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 628 WKGILLFGPPGTGKSYLAKAVA 693
++ +L +GPPGTGK+ AK++A
Sbjct: 329 YRNLLFYGPPGTGKTMFAKSLA 350
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 619 RIPWKGILLFGPPGTGKSYLAKAVATEANNST-FFSVSSSDLVS 747
+I + +L+ G PGTGK+ +A +A T F S++ S++ S
Sbjct: 166 KIAGRAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFS 209
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSK 750
K LL GPPG GK+ A V E S + +++SD SK
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYS-YVEMNASDARSK 310
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 577 VILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKW 753
V P+ +P F+ I KGILL G PG GK+ L AT S + +D+
Sbjct: 57 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHK-ATVDCGIKLVSTNGTDVFGPH 115
Query: 754 LGE 762
GE
Sbjct: 116 AGE 118
>SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26)
Length = 420
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -3
Query: 155 CHCFLNSPQLWCKKLLSCIFDAIIRCYYYKKTR 57
CHC L+SP ++ I+ ++ +++K+TR
Sbjct: 155 CHCLLHSPDPVLPVKITEIYSIFVKIFFHKRTR 187
>SB_2014| Best HMM Match : MAM (HMM E-Value=0)
Length = 2282
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 599 HICLLAREYHGRASYYLDPLVLVSHTWQRLWLLKPTIQHSSLFH 730
H+C+ + + G YLD V+ W L P H S+FH
Sbjct: 1260 HVCVTWKSHAGVWEIYLDGQVIGFGRWLSARLTLPDTTHFSIFH 1303
>SB_11352| Best HMM Match : LRR_1 (HMM E-Value=0.0019)
Length = 507
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -3
Query: 155 CHCFLNSPQLWCKKLLSCIFDAIIRCYYYKKTR 57
CHC L+SP ++ I+ ++ +++K+TR
Sbjct: 93 CHCLLHSPDPVLPVKITEIYSIFVKIFFHKRTR 125
>SB_59431| Best HMM Match : Prefoldin (HMM E-Value=0.4)
Length = 462
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 675 LGKGCGY*SQQFNILLCFII 734
L KGCGY Q ++L CFI+
Sbjct: 210 LNKGCGYGCQVHHVLYCFIV 229
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +3
Query: 162 NTLQKAIDLVTKATEEDKNKN-----YEEALRLYEHV*SIFFMQ*NMRPKVKGQKKAF 320
N Q+A+ L K +E N YE+A+ Y+HV S+F V GQ KA+
Sbjct: 208 NNYQQALSLFQKTGDESGQANATMAKYEDAMNNYQHVLSLF----QKTGDVSGQAKAY 261
>SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2047
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 631 KGILLFGPPGTGK-SYLAKAVATEANNSTFFS 723
KG+++ G PG+GK S++A + ++ +N++ S
Sbjct: 439 KGVIITGDPGSGKSSFVANIICSQLSNNSMHS 470
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 461 DHQNHCHYHSSYHHFWI 411
DHQ+H H+H +HH I
Sbjct: 30 DHQHHDHHHHDHHHMTI 46
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 619 RIPWKGILLFGPPGTGKSYLAKAVA 693
R+ ILL GP G+GK+ LA+ +A
Sbjct: 267 RLDKSNILLLGPTGSGKTLLAQTIA 291
>SB_755| Best HMM Match : MIT (HMM E-Value=0.055)
Length = 146
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 165 TLQKAIDLVTKATEEDKNKNYEEALRLYE 251
+L+ AI ++ +A E D+ K+Y EAL Y+
Sbjct: 2 SLEAAISVLKRAVELDEGKSYSEALVCYQ 30
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 634 GILLFGPPGTGKSYLAKAVATEANNST 714
G+LL GP G+GK+ L + VA+ ST
Sbjct: 120 GVLLEGPVGSGKTCLVEHVASMCGRST 146
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 631 KGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSD 738
K LL GPPG GK+ LA +A A + +S D
Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHAGYNVVEMNASDD 416
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAV 690
I+L GPPG+GK+++AK +
Sbjct: 1252 IILRGPPGSGKTHVAKLI 1269
>SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 9.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 455 QNHCHYHSSYHHFWIPHPLLV 393
++HCH+H HH + H +L+
Sbjct: 131 KHHCHHHHHQHHHHLFHIILI 151
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 637 ILLFGPPGTGKSYLAKAVATE 699
+L +GPPGTGK+ AVA +
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22)
Length = 407
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 561 SIERGCNSTNKISTFVYWQENTMEGHLI 644
S+ RG +T+K+S +Y +EN E ++
Sbjct: 214 SMRRGAGTTSKVSMIMYGEENETEARVL 241
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 458 HQNHCHYHSSYHHFWIPH 405
H H H H YHH PH
Sbjct: 575 HHRHHHRHHHYHHHHYPH 592
>SB_22684| Best HMM Match : PA (HMM E-Value=4.5e-06)
Length = 153
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 640 LLFGPPGTGKSYLAKAVATEANNSTFF 720
LL G P + + Y KAV E N TFF
Sbjct: 73 LLCGKPKSSQEYFNKAVIGERGNCTFF 99
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 171 QKAIDLVTKATEEDKNKNYEEALRLYE 251
++A+D+ K +ED YE ALR+YE
Sbjct: 582 KRALDIRLKNKQEDAIALYERALRIYE 608
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,678,705
Number of Sequences: 59808
Number of extensions: 374638
Number of successful extensions: 1392
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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