Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0438
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.4  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 567 ERGCNSTNKISTFVYWQENTMEGH 638
           ER CN   ++  F+ W E   E +
Sbjct: 248 ERLCNRLGRVKRFINWHEPIPEAY 271


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 564 IERGCNSTNKISTFVYWQENTME 632
           IER   +T+KI  +  W E  +E
Sbjct: 375 IERNSGATDKIIRWCTWSEGDLE 397


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 564 IERGCNSTNKISTFVYWQENTME 632
           IER   +T+KI  +  W E  +E
Sbjct: 375 IERNSGATDKIIRWCTWSEGDLE 397


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 564 IERGCNSTNKISTFVYWQENTME 632
           IER   +T+KI  +  W E  +E
Sbjct: 375 IERNSGATDKIIRWCTWSEGDLE 397


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 411 NPKVMIRRVIVTVILMIQKRKNYKGNLKELLW*ETSCEVE 530
           N K+   R+I+  I  I  R N K  +K LL      EVE
Sbjct: 208 NVKLKELRIILEDIKHINTRHNTKNGMKTLLSETDIWEVE 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,395
Number of Sequences: 438
Number of extensions: 3943
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)