Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0437
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269...    29   4.5  

>05_04_0272 +
           19624898-19625071,19625909-19626370,19626471-19626905,
           19626992-19627237,19627318-19628085,19628245-19628417,
           19629337-19629440,19629525-19630127,19630210-19630214
          Length = 989

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 323 LDELDRESSPVSSWSNV-GRTGDVLPTPLSNVETRP 427
           +D L     P+SS+S + G   D LP+P SNV  RP
Sbjct: 855 VDTLPSTIRPLSSYSLLDGSLDDGLPSPASNVSFRP 890


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,913
Number of Sequences: 37544
Number of extensions: 491062
Number of successful extensions: 1367
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)