Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0437
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-4|AAB42228.3|  452|Caenorhabditis elegans Tetraspanin fam...    29   3.1  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical...    28   5.4  
U53338-4|AAA96192.3|  235|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF317421-1|AAK69599.1|  235|Caenorhabditis elegans lysosomal-ass...    28   7.1  
Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U41030-4|AAA82364.1|  547|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    27   9.4  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    27   9.4  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    27   9.4  

>U88167-4|AAB42228.3|  452|Caenorhabditis elegans Tetraspanin family
           protein 19 protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -1

Query: 600 SCRQNGDGKV---EDLKTEEGQQISRFPTSGAVDIISVRAMVPRYIRLWSLGC 451
           SC +  DG V    +L +EE Q++ ++   G  D++    ++P     WS GC
Sbjct: 289 SCCRKFDGVVCSQRNLTSEETQEVRKYAEVGKWDLMLKYFVMPELGLYWSRGC 341


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 377 RTGDVLPTPLSNVETRPSPYSQHASHPSDH 466
           R+ D LPT L NV TRP+     +  P D+
Sbjct: 432 RSSDTLPTRLKNVRTRPTEKQIASVLPGDN 461


>AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical
           protein Y47D7A.16 protein.
          Length = 417

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 499 TDYVYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIH 630
           T Y++GA R  P YLL  F L I D   ++L    +L ++ Q H
Sbjct: 98  TGYIFGAIRSWPLYLL-LFGLAIVDAISSVL----FLPFMAQFH 136


>U53338-4|AAA96192.3|  235|Caenorhabditis elegans Hypothetical
           protein C05E11.3 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 189 ERGSEWLC-CFCLHVRTGTIILG 254
           E   E+ C C C HV+TG  I+G
Sbjct: 33  ESSDEYRCLCNCFHVKTGAFIIG 55


>AF317421-1|AAK69599.1|  235|Caenorhabditis elegans
           lysosomal-associated transmembraneprotein protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 189 ERGSEWLC-CFCLHVRTGTIILG 254
           E   E+ C C C HV+TG  I+G
Sbjct: 33  ESSDEYRCLCNCFHVKTGAFIIG 55


>Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical
           protein C38D9.8 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 180 TWDGILTLPWL*NAQELVPEYAPTIFPVK 94
           +WD I+ L  L NAQE  PE+ P  F +K
Sbjct: 235 SWDPIVVLEGL-NAQEWSPEHRPQKFSLK 262


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 612 TQIASCRQNGDGKVEDLKTEEGQQISRFPTSGAVD 508
           T  A C +   GK     TEEGQ ++ FP S   +
Sbjct: 200 TSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCE 234


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 612 TQIASCRQNGDGKVEDLKTEEGQQISRFPTSGAVD 508
           T  A C +   GK     TEEGQ ++ FP S   +
Sbjct: 202 TSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCE 236


>U41030-4|AAA82364.1|  547|Caenorhabditis elegans Hypothetical
           protein C44C1.4a protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 410 LTVVWAVHLQCAPHCSMNSLGMTHGPVHPAIEDHAQSLLK 291
           L +++A+  + AP   +NSL     P HP I     +LLK
Sbjct: 378 LVLLYALRFENAPGNELNSLISQLRPQHPKIHQTVSTLLK 417


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 612 TQIASCRQNGDGKVEDLKTEEGQQISRFPTSGAVD 508
           T  A C +   GK     TEEGQ ++ FP S   +
Sbjct: 200 TSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCE 234


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 612 TQIASCRQNGDGKVEDLKTEEGQQISRFPTSGAVD 508
           T  A C +   GK     TEEGQ ++ FP S   +
Sbjct: 202 TSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCE 236


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/61 (24%), Positives = 23/61 (37%)
 Frame = +1

Query: 85  SFEFHWKYSRCIFWN*LLSILQPRQC*DSIPSWEVNVAVSGYAASAYMFGLAQLSWDMAP 264
           S+   W Y  C+F   L  ++ P     S+  W  +V  SG   + +  G     W    
Sbjct: 187 SYLKEWYYYNCVFQLGLGILMIPEILTSSLSGWHYSVCHSGTLYTGFFSGSVVAIWTFTK 246

Query: 265 V 267
           V
Sbjct: 247 V 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,056,443
Number of Sequences: 27780
Number of extensions: 394451
Number of successful extensions: 1128
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)