Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0437
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.51
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.67
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 24 1.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 4.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.7
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 6.3
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 6.3
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 6.3
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.51
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 230 SDWHNYPGTWHLFLHLVALGVLAA-IVRDPRLLDELDRESSPVSSWSNVG 376
+DW++ +W + L ALG LA + + D +RES V N G
Sbjct: 431 NDWYSLASSWPALVPL-ALGFLAGELTYSQEIGDRQERESELVPYLENKG 479
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.67
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 591 QNGDGKVEDLKTEEGQQISRFPTSGAVD 508
++ DG V L+ E+ + +PTS A D
Sbjct: 306 EDADGAVSPLRREKDRGSREYPTSNATD 333
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 136 RVSSRICTDYISSEIQNYY-ESNFLKKLTVKFQFIE 32
++ S + +YIS+ I NY ++N+ KKL +IE
Sbjct: 80 KIISSLSNNYISN-ISNYNNDNNYNKKLYYNINYIE 114
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 136 RVSSRICTDYISSEIQNYYESN-FLKKLTVKFQFIE 32
++ S + +YIS+ I NY +N + KKL +IE
Sbjct: 80 KIISSLSNNYISN-ISNYNNNNNYNKKLYYNINYIE 114
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 136 RVSSRICTDYISSEIQNYYESN-FLKKLTVKFQFIE 32
++ S + +YIS+ I NY +N + KKL +IE
Sbjct: 318 KIISSLSNNYISN-ISNYNNNNNYNKKLYYNINYIE 352
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 88 NYYESNFLKKLTVKFQFIE 32
NYY +N KKL +IE
Sbjct: 316 NYYNNNNYKKLYYNINYIE 334
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +3
Query: 381 LEMYCPHHCQMWKLVPAHTLNMLHILVTTA*YTWVP 488
L MY P M K + +T N I + W+P
Sbjct: 364 LRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIP 399
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 503 IMSTAPLVGNRLICCPSSVFRSSTLP 580
I + A +VG +I C + R +T P
Sbjct: 492 IFTIASIVGTFIILCEAPALRDNTKP 517
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 485 YPGILGCGH 459
YPG L CGH
Sbjct: 31 YPGTLWCGH 39
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 485 YPGILGCGH 459
YPG L CGH
Sbjct: 36 YPGTLWCGH 44
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 485 YPGILGCGH 459
YPG L CGH
Sbjct: 36 YPGTLWCGH 44
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,790
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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